Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0052800 Salix brachista HOM05D005081 ORTHO05D005506 7.7e-155 550.4 277 100.0
Potri.006G070900 Populus trichocarpa HOM05D005081 ORTHO05D005506 4.4e-118 428.3 267 82.8
Potri.018G132600 Populus trichocarpa HOM05D005081 ORTHO05D005506 2.1e-99 366.3 283 71.0
Sabra18G0112300 Salix brachista HOM05D005081 ORTHO05D005506 1.8e-79 300.1 250 66.8
CsaV3_1G032220 Cucumis sativus L. HOM05D005081 ORTHO05D005506 1.2e-46 191.0 276 47.1
Manes.15G189400 Manihot esculenta HOM05D005081 ORTHO05D005506 3.4e-46 189.5 268 48.1
GSVIVG01035163001 Vitis vinifera HOM05D005081 ORTHO05D005506 5.9e-46 188.7 275 49.8
CiPaw.15G154600 Carya illinoinensis HOM05D005081 ORTHO05D005506 1.3e-45 187.6 272 46.3
ClCG06G014000 Citrullus lanatus HOM05D005081 ORTHO05D005506 2.2e-45 186.8 274 46.4
PGR044G2548 Punica granatum HOM05D005081 ORTHO05D005506 3.2e-44 183.0 269 45.7
Cpa.g.sc115.44 Carica papaya HOM05D005081 ORTHO05D005506 9.4e-44 181.4 267 47.9
Hma1.2p1_0022F.1_g014783 Hydrangea macrophylla HOM05D005081 ORTHO05D005506 2.7e-43 179.9 270 46.7
SGA_v2.0_scaffold63G21842 Striga asiatica HOM05D005081 ORTHO05D005506 2.7e-43 179.9 270 45.6
TWI32G0620 Tripterygium wilfordii HOM05D005081 ORTHO05D005506 3.6e-43 179.5 265 44.9
MELO3C017390.2 Cucumis melo HOM05D005081 ORTHO05D005506 5.2e-42 175.6 276 45.7
MSTRG.10457 Avicennia marina HOM05D005081 ORTHO05D005506 6.7e-42 175.3 265 46.4
Rhsim01G0113200 Rhododendron simsii HOM05D005081 ORTHO05D005506 6.7e-42 175.3 275 44.4
FAN12G4058 Fragaria x ananassa HOM05D005081 ORTHO05D005506 5.7e-41 172.2 280 43.6
QL11p009451 Quercus lobata HOM05D005081 ORTHO05D005506 1.3e-40 171.0 267 46.1
CiPaw.16G103000 Carya illinoinensis HOM05D005081 ORTHO05D005506 2.8e-40 169.9 270 43.7
Ciclev10012648m.g Citrus clementina HOM05D005081 ORTHO05D005506 2.8e-40 169.9 272 43.8
FvH4_4g06450 Fragaria vesca HOM05D005081 ORTHO05D005506 2.8e-40 169.9 280 43.2
FAN22G0520 Fragaria x ananassa HOM05D005081 ORTHO05D005506 2.4e-39 166.8 280 42.9
Oeu008926.1 Olea europaea HOM05D005081 ORTHO05D005506 4.1e-39 166.0 266 43.2
Actinidia29969 Actinidia chinensis HOM05D005081 ORTHO05D005506 1.2e-38 164.5 271 43.5
Eucgr.C02188 Eucalyptus grandis HOM05D005081 ORTHO05D005506 1.2e-38 164.5 281 42.3
RcHm_v2.0_Chr4g0398241 Rosa chinensis HOM05D005081 ORTHO05D005506 2.0e-38 163.7 282 45.4
MSTRG.26528 Avicennia marina HOM05D005081 ORTHO05D005506 2.6e-38 163.3 266 42.9
CSS0043250 Camellia sinensis var. sinensis HOM05D005081 ORTHO05D005506 2.6e-38 163.3 268 40.3
Haze_19038 Corylus avellana HOM05D001026 ORTHO05D003027 4.5e-38 162.5 261 45.6
Sed0028150 Sechium edule HOM05D005081 ORTHO05D005506 5.9e-38 162.2 273 44.0
FAN07G0684 Fragaria x ananassa HOM05D005081 ORTHO05D005506 1.7e-37 160.6 278 42.4
Cc00_g16170 Coffea canephora HOM05D005081 ORTHO05D005506 5.0e-37 159.1 275 42.2
Nitab4.5_0010835g0010 Nicotiana tabacum HOM05D005081 ORTHO05D005506 8.5e-37 158.3 268 40.7
Migut.L01903 Erythranthe guttata HOM05D005081 ORTHO05D005506 1.1e-36 157.9 265 43.0
vmacro20793 Vaccinium macrocarpon HOM05D005081 ORTHO05D005506 1.1e-36 157.9 278 43.9
FAN17G0390 Fragaria x ananassa HOM05D005081 ORTHO05D005506 2.5e-36 156.8 280 42.9
Atru.chr12.2077 Acer truncatum HOM05D005081 ORTHO05D005506 9.4e-36 154.8 271 42.1
Nitab4.5_0000833g0060 Nicotiana tabacum HOM05D005081 ORTHO05D005506 1.2e-35 154.5 265 40.4
TAR383G1035 Trochodendron aralioides HOM05D005081 ORTHO05D005506 2.1e-35 153.7 268 40.7
MBI16_g18201_MAGBIO Magnolia biondii HOM05D005081 ORTHO05D005506 6.1e-35 152.1 269 40.5
TAR625G0352 Trochodendron aralioides HOM05D005081 ORTHO05D005506 6.1e-35 152.1 268 38.8
Hund26317 Selenicereus undatus HOM05D005081 ORTHO05D005506 1.0e-34 151.4 272 41.5
PGSC0003DMG400013692 Solanum tuberosum HOM05D005081 ORTHO05D005506 1.0e-34 151.4 267 39.7
Solyc05g046310.3 Solanum lycopersicum HOM05D005081 ORTHO05D005506 1.4e-34 151.0 264 39.0
Sopen00g006190 Solanum pennellii HOM05D005081 ORTHO05D005506 1.4e-34 151.0 264 38.6
AUR62021338 Chenopodium quinoa HOM05D005081 ORTHO05D005506 3.0e-34 149.8 266 42.5
Duzib170G0058 Durio zibethinus HOM05D005081 ORTHO05D005506 4.0e-34 149.4 263 41.8
Nitab4.5_0011475g0010 Nicotiana tabacum HOM05D005081 ORTHO05D005506 5.2e-34 149.1 270 39.6
Oeu044689.1 Olea europaea HOM05D005081 ORTHO05D005506 5.2e-34 149.1 272 41.2
AUR62033253 Chenopodium quinoa HOM05D005081 ORTHO05D005506 1.2e-33 147.9 266 41.7
Hma1.2p1_0022F.1_g014780 Hydrangea macrophylla HOM05D005081 ORTHO05D005506 1.2e-33 147.9 267 39.3
Dinv02618 Davidia involucrata HOM05D005081 ORTHO05D005506 3.3e-33 146.4 211 52.6
Actinidia38513 Actinidia chinensis HOM05D005081 ORTHO05D005506 9.7e-33 144.8 265 41.1
EL10Ac8g18324 Beta vulgaris HOM05D005081 ORTHO05D005506 2.8e-32 143.3 266 39.5
SalBow6G6882 Salvia bowleyana HOM05D005081 ORTHO05D005506 1.4e-31 141.0 252 40.5
PSO170G2950 Papaver somniferum HOM05D005081 ORTHO05D005506 5.3e-31 139.0 277 41.2
Sed0020945 Sechium edule HOM05D005081 ORTHO05D005506 1.2e-30 137.9 268 38.1
Aqoxy7G02679 Aquilegia oxysepala HOM05D005081 ORTHO05D005506 1.6e-30 137.5 268 38.1
MD13G1236100 Malus domestica HOM05D005081 ORTHO05D005506 2.7e-30 136.7 247 42.9
PSO063G3463 Papaver somniferum HOM05D005081 ORTHO05D005506 3.5e-30 136.3 277 40.1
Peaxi162Scf00315g00813 Petunia axillaris HOM05D005081 ORTHO05D005506 4.5e-30 136.0 269 39.0
Prupe.1G067800 Prunus persica HOM05D005081 ORTHO05D005506 4.5e-30 136.0 247 42.9
AT5G35320 Arabidopsis thaliana HOM05D005081 ORTHO05D005506 1.3e-29 134.4 266 38.0
Thecc.09G189400 Theobroma cacao HOM05D005081 ORTHO05D005506 1.7e-29 134.0 263 37.3
Actinidia31880 Actinidia chinensis HOM05D005081 ORTHO05D005506 2.9e-29 133.3 250 42.4
Sc08g0004640 Simmondsia chinensis HOM05D005081 ORTHO05D005506 2.9e-29 133.3 265 41.5
HanXRQChr03g0067191 Helianthus annuus HOM05D005081 ORTHO05D005506 3.8e-29 132.9 263 38.0
Peaxi162Scf00889g00221 Petunia axillaris HOM05D005081 ORTHO05D005506 6.5e-29 132.1 269 39.0
Ah.09g230120 Amaranthus hybridus HOM05D005081 ORTHO05D005506 2.5e-28 130.2 269 37.5
CANSAT80G2033 Cannabis sativa HOM05D005081 ORTHO05D005506 3.2e-28 129.8 266 37.2
Lsat_1_v5_gn_7_59220 Lactuca sativa HOM05D005081 ORTHO05D005506 3.2e-28 129.8 261 39.1
ECA240G1118 Erigeron canadensis HOM05D005081 ORTHO05D005506 4.2e-28 129.4 262 39.3
Ah.14g083630 Amaranthus hybridus HOM05D005081 ORTHO05D005506 5.5e-28 129.0 265 38.5
Gohir.D04G006900 Gossypium hirsutum HOM05D005081 ORTHO05D005506 9.4e-28 128.3 263 39.5
Medtr8g101480 Medicago truncatula HOM05D005081 ORTHO05D005506 9.4e-28 128.3 278 37.4
Gorai.012G008600 Gossypium raimondii HOM05D005081 ORTHO05D005506 1.6e-27 127.5 263 38.0
Lj4g0023825 Lotus japonicus HOM05D005081 ORTHO05D005506 1.6e-27 127.5 261 34.1
AL7G44130 Arabidopsis lyrata HOM05D005081 ORTHO05D005506 2.1e-27 127.1 266 36.8
Gohir.A05G408500 Gossypium hirsutum HOM05D005081 ORTHO05D005506 2.7e-27 126.7 263 38.4
Duzib168G1013 Durio zibethinus HOM05D005081 ORTHO05D005506 8.0e-27 125.2 263 38.0
Nitab4.5_0000053g0180 Nicotiana tabacum HOM05D005081 ORTHO05D005506 8.0e-27 125.2 265 37.4
MBI13_g31561_MAGBIO Magnolia biondii HOM05D005081 ORTHO05D005506 1.8e-26 124.0 259 36.3
Carub.0007s3114 Capsella rubella HOM05D005081 ORTHO05D005506 5.2e-26 122.5 268 37.3
Thhalv10003466m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 5.2e-26 122.5 266 37.6
CARHR217350 Cardamine hirsuta HOM05D005081 ORTHO05D005506 7.5e-25 118.6 265 36.2
Sp3g25120 Schrenkiella parvula HOM05D005081 ORTHO05D005506 2.2e-24 117.1 277 37.9
Aa31LG4G14880 Aethionema arabicum HOM05D005081 ORTHO05D005506 8.3e-24 115.2 276 35.5
Cc10_g11560 Coffea canephora HOM05D005081 ORTHO05D005506 1.1e-23 114.8 215 40.0
BraA03t13610Z Brassica rapa HOM05D005081 ORTHO05D005506 1.4e-23 114.4 269 37.5
Hund09052 Selenicereus undatus HOM05D005081 ORTHO05D005506 1.4e-23 114.4 265 37.7
A03p44750 Brassica napus HOM05D005081 ORTHO05D005506 2.4e-23 113.6 269 37.5
THA.LOC104808906 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 4.1e-23 112.8 265 36.6
unitig_899.g15188 Utricularia gibba HOM05D005081 ORTHO05D005506 4.1e-23 112.8 270 35.6
Ca_17410_v3 Cicer arietinum L. HOM05D005081 ORTHO05D005506 1.6e-22 110.9 276 35.5
AL3G43930 Arabidopsis lyrata HOM05D005081 ORTHO05D005506 4.5e-22 109.4 268 35.8
THA.LOC104826579 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 4.5e-22 109.4 269 35.3
ATR0626G171 Amborella trichopoda HOM05D005081 ORTHO05D005506 2.2e-21 107.1 266 36.5
THA.LOC104815319 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 2.2e-21 107.1 269 33.8
DCAR_019825 Daucus carota HOM05D005081 ORTHO05D005506 5.0e-21 105.9 280 35.0
TPR.G25464 Trifolium pratense HOM05D005081 ORTHO05D005506 5.0e-21 105.9 267 33.0
HanXRQChr10g0303491 Helianthus annuus HOM05D005081 ORTHO05D005506 1.5e-20 104.4 266 34.6
ECA234G2314 Erigeron canadensis HOM05D005081 ORTHO05D005506 1.6e-19 100.9 264 33.0
CDE02G3184 Ceratophyllum demersum HOM05D005081 ORTHO05D005506 2.8e-19 100.1 205 36.1
Glyma.05G221800 Glycine max HOM05D005081 ORTHO05D005506 3.6e-19 99.8 262 32.8
BcaB08g34509 Brassica carinata HOM05D005081 ORTHO05D005506 1.5e-17 94.4 269 33.5
arahy.Tifrunner.gnm1.ann1.TAK2NC Arachis hypogaea HOM05D005081 ORTHO05D005506 3.4e-17 93.2 276 31.5
Carub.0003s2733 Capsella rubella HOM05D005081 ORTHO05D005506 1.7e-16 90.9 268 34.7
Os02g0141500 Oryza sativa ssp. japonica HOM05D005081 ORTHO05D005506 4.9e-16 89.4 263 31.6
VMungo0251G2709 Vigna mungo HOM05D005081 ORTHO05D005506 4.9e-16 89.4 271 33.9
Lalb_Chr05g0223691 Lupinus albus HOM05D005081 ORTHO05D005506 3.1e-15 86.7 271 32.1
arahy.Tifrunner.gnm1.ann1.FV9V0P Arachis hypogaea HOM05D005081 ORTHO05D005506 5.4e-15 85.9 270 30.4
HPP92_017106 Vanilla planifolia HOM05D005081 ORTHO05D005506 2.7e-14 83.6 259 32.4
Thecc.09G002900 Theobroma cacao HOM05D005081 ORTHO05D005506 3.5e-14 83.2 265 27.9
HPP92_017096 Vanilla planifolia HOM05D005081 ORTHO05D005506 4.5e-14 82.8 259 32.4
Psat7g022000 Pisum sativum HOM05D005081 ORTHO05D005506 2.9e-13 80.1 159 39.0
Prupe.1G455900 Prunus persica HOM05D005081 ORTHO05D005506 5.0e-13 79.3 265 31.3
Zm00001eb208100 Zea mays HOM05D005081 ORTHO05D005506 5.0e-13 79.3 201 33.8
MD15G1102900 Malus domestica HOM05D005081 ORTHO05D005506 1.5e-12 77.8 265 30.9
BcaC01g03146 Brassica carinata HOM05D005081 ORTHO05D005506 1.9e-12 77.4 263 32.7
C03p55600 Brassica napus HOM05D005081 ORTHO05D005506 1.9e-12 77.4 263 32.7
BolC3t17837H Brassica oleracea HOM05D005081 ORTHO05D005506 1.9e-12 77.4 263 32.7
CARHR103910 Cardamine hirsuta HOM05D005081 ORTHO05D005506 2.3e-10 70.5 132 37.9
Peaxi162Scf00566g00025 Petunia axillaris HOM05D005081 ORTHO05D005506 1.5e-09 67.8 140 33.6
Peaxi162Scf00460g00005 Petunia axillaris HOM05D005081 ORTHO05D005506 9.8e-09 65.1 142 32.4
MD16G1241100 Malus domestica HOM05D005081 ORTHO05D005506 2.9e-08 63.5 129 44.2
Peaxi162Scf01260g00001 Petunia axillaris HOM05D005081 ORTHO05D005506 3.7e-08 63.2 139 32.4
Peaxi162Scf00083g00112 Petunia axillaris HOM05D005081 ORTHO05D005506 4.9e-08 62.8 144 31.2
MD08G1124200 Malus domestica HOM05D005081 ORTHO05D005506 6.4e-08 62.4 266 29.3
Peaxi162Scf00228g00099 Petunia axillaris HOM05D005081 ORTHO05D005506 4.1e-07 59.7 142 31.7
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 1.2e-06 58.2 129 34.9
Peaxi162Scf00740g00003 Petunia axillaris HOM05D005081 ORTHO05D005506 1.2e-06 58.2 120 34.2
Peaxi162Scf00020g00002 Petunia axillaris HOM05D005081 ORTHO05D005506 1.6e-06 57.8 108 36.1
Atru.chr7.2685 Acer truncatum HOM05D005081 ORTHO05D005506 2.7e-06 57.0 161 29.2


User provided reference genes

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