Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0052300 Salix brachista HOM05D002570 ORTHO05D002689 4.5e-98 361.3 187 100.0
Potri.006G070200 Populus trichocarpa HOM05D002570 ORTHO05D002689 1.1e-56 223.8 130 87.7
Potri.018G131900 Populus trichocarpa HOM05D002570 ORTHO05D002689 2.0e-37 159.8 133 66.9
Dinv25488 Davidia involucrata HOM05D002570 ORTHO05D002689 1.0e-17 94.4 111 45.9
Lj4g0013925 Lotus japonicus HOM05D002570 ORTHO05D002689 2.8e-15 86.3 110 42.7
arahy.Tifrunner.gnm1.ann1.G00P8D Arachis hypogaea HOM05D002570 ORTHO05D002689 3.6e-15 85.9 61 60.7
VMungo1215G3302 Vigna mungo HOM05D002570 ORTHO05D002689 4.7e-15 85.5 109 45.0
Duzib251G0386 Durio zibethinus HOM05D002570 ORTHO05D002689 1.1e-14 84.3 108 43.5
Phvul.003G137400 Phaseolus vulgaris HOM05D002570 ORTHO05D002689 1.8e-14 83.6 84 50.0
Thecc.02G311400 Theobroma cacao HOM05D002570 ORTHO05D002689 3.1e-14 82.8 62 62.9
FvH4_4g06680 Fragaria vesca HOM05D030384 ORTHO05D002689 5.2e-14 82.0 99 46.5
FAN12G3444 Fragaria x ananassa HOM05D030384 ORTHO05D002689 5.2e-14 82.0 99 46.5
Ciclev10010203m.g Citrus clementina HOM05D002570 ORTHO05D002689 6.8e-14 81.6 98 46.9
Gohir.A12G155900 Gossypium hirsutum HOM05D002570 ORTHO05D002689 1.5e-13 80.5 109 40.4
Gohir.D12G159000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 1.5e-13 80.5 109 41.3
Gohir.A05G143000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 7.6e-13 78.2 114 42.1
Gorai.008G172100 Gossypium raimondii HOM05D002570 ORTHO05D002689 1.3e-12 77.4 109 40.4
Gohir.D05G145400 Gossypium hirsutum HOM05D002570 ORTHO05D002689 1.7e-12 77.0 114 41.2
Gorai.009G149300 Gossypium raimondii HOM05D002570 ORTHO05D002689 1.7e-12 77.0 114 41.2
Lalb_Chr12g0199761 Lupinus albus HOM05D002570 ORTHO05D002689 2.2e-12 76.6 92 46.7
arahy.Tifrunner.gnm1.ann1.ANT7GU Arachis hypogaea HOM05D002570 ORTHO05D002689 3.7e-12 75.9 61 57.4
Psat4g014680 Pisum sativum HOM05D002570 ORTHO05D002689 8.4e-12 74.7 108 38.0
Cfa013397 Carpinus fangiana HOM05D002570 ORTHO05D002689 1.1e-11 74.3 100 39.0
TPR.G27566 Trifolium pratense HOM05D002570 ORTHO05D002689 1.4e-11 73.9 117 35.9
TWI60G0727 Tripterygium wilfordii HOM05D002570 ORTHO05D002689 3.2e-11 72.8 74 51.4
FAN22G1225 Fragaria x ananassa HOM05D002570 ORTHO05D002689 4.1e-11 72.4 66 54.5
Actinidia08926 Actinidia chinensis HOM05D002570 ORTHO05D002689 5.4e-11 72.0 115 40.0
Glyma.17G055600 Glycine max HOM05D002570 ORTHO05D002689 5.4e-11 72.0 108 41.7
Thecc.06G132900 Theobroma cacao HOM05D002570 ORTHO05D002689 7.1e-11 71.6 107 40.2
PGR102G1262 Punica granatum HOM05D002570 ORTHO05D002689 9.2e-11 71.2 108 39.8
Medtr4g126400 Medicago truncatula HOM05D002570 ORTHO05D002689 2.1e-10 70.1 110 33.6
COL.COLO4_30895 Corchorus olitorius HOM05D002570 ORTHO05D002689 4.6e-10 68.9 111 39.6
CSS0011601 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 6.0e-10 68.6 114 38.6
CSS0038527 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 6.0e-10 68.6 114 38.6
SalBow1G2645 Salvia bowleyana HOM05D002570 ORTHO05D002689 6.0e-10 68.6 112 35.7
Duzib192G0671 Durio zibethinus HOM05D002570 ORTHO05D002689 7.8e-10 68.2 76 48.7
Prupe.1G069600 Prunus persica HOM05D002570 ORTHO05D002689 7.8e-10 68.2 70 45.7
vmacro19088 Vaccinium macrocarpon HOM05D002570 ORTHO05D002689 7.8e-10 68.2 116 37.1
Cc04_g05480 Coffea canephora HOM05D002570 ORTHO05D002689 1.0e-09 67.8 108 38.9
Glyma.13G103400 Glycine max HOM05D002570 ORTHO05D002689 1.0e-09 67.8 112 42.0
Rhsim08G0200900 Rhododendron simsii HOM05D002570 ORTHO05D002689 1.0e-09 67.8 115 36.5
FAN17G2389 Fragaria x ananassa HOM05D030384 ORTHO05D002689 1.3e-09 67.4 73 47.9
Hma1.2p1_1208F.1_g267175 Hydrangea macrophylla HOM05D002570 ORTHO05D002689 3.0e-09 66.2 114 38.6
Oeu033446.1 Olea europaea HOM05D002570 ORTHO05D002689 3.0e-09 66.2 65 46.2
MSTRG.22832 Avicennia marina HOM05D002570 ORTHO05D002689 3.9e-09 65.9 65 47.7
Sopen03g036750 Solanum pennellii HOM05D002570 ORTHO05D002689 5.1e-09 65.5 114 35.1
MSTRG.11212 Avicennia marina HOM05D002570 ORTHO05D002689 6.6e-09 65.1 72 43.1
Dinv23257 Davidia involucrata HOM05D002570 ORTHO05D002689 6.6e-09 65.1 75 42.7
Migut.D01154 Erythranthe guttata HOM05D002570 ORTHO05D002689 8.6e-09 64.7 65 47.7
Solyc03g117840.4 Solanum lycopersicum HOM05D002570 ORTHO05D002689 8.6e-09 64.7 113 36.3
PGSC0003DMG400014220 Solanum tuberosum HOM05D002570 ORTHO05D002689 1.1e-08 64.3 113 36.3
Nn8g40408 Nelumbo nucifera HOM05D002570 ORTHO05D002689 1.5e-08 63.9 119 38.7
Actinidia25496 Actinidia chinensis HOM05D002570 ORTHO05D002689 1.9e-08 63.5 121 36.4
Dinv13685 Davidia involucrata HOM05D002570 ORTHO05D002689 1.9e-08 63.5 115 37.4
Dinv21443 Davidia involucrata HOM05D002570 ORTHO05D002689 1.9e-08 63.5 115 37.4
Nitab4.5_0004194g0090 Nicotiana tabacum HOM05D002570 ORTHO05D002689 1.9e-08 63.5 64 48.4
Nitab4.5_0007293g0020 Nicotiana tabacum HOM05D002570 ORTHO05D002689 1.9e-08 63.5 64 48.4
TAR383G0799 Trochodendron aralioides HOM05D002570 ORTHO05D002689 1.9e-08 63.5 117 39.3
CAN.G1008.23 Capsicum annuum HOM05D002570 ORTHO05D002689 2.5e-08 63.2 111 34.2
Gohir.A10G049400 Gossypium hirsutum HOM05D002570 ORTHO05D002689 2.5e-08 63.2 115 33.9
MBI16_g27293_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 3.3e-08 62.8 108 35.2
Manes.11G071400 Manihot esculenta HOM05D002570 ORTHO05D002689 3.3e-08 62.8 107 37.4
Actinidia18273 Actinidia chinensis HOM05D002570 ORTHO05D002689 4.3e-08 62.4 114 36.0
ClCG09G003530 Citrullus lanatus HOM05D002570 ORTHO05D002689 5.6e-08 62.0 101 35.6
Gohir.D10G050000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 5.6e-08 62.0 115 34.8
MBI14_g19442_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 5.6e-08 62.0 76 42.1
MELO3C023490.2 Cucumis melo HOM05D002570 ORTHO05D002689 7.3e-08 61.6 72 44.4
GSVIVG01016063001 Vitis vinifera HOM05D002570 ORTHO05D002689 7.3e-08 61.6 108 38.9
QL05p081283 Quercus lobata HOM05D002570 ORTHO05D002689 9.6e-08 61.2 108 39.8
FvH4_6g28000 Fragaria vesca HOM05D002570 ORTHO05D002689 1.2e-07 60.8 111 35.1
FAN02G4288 Fragaria x ananassa HOM05D002570 ORTHO05D002689 1.2e-07 60.8 110 35.5
FAN05G0139 Fragaria x ananassa HOM05D002570 ORTHO05D002689 1.2e-07 60.8 111 35.1
FAN05G5383 Fragaria x ananassa HOM05D002570 ORTHO05D002689 1.2e-07 60.8 111 35.1
FAN14G4539 Fragaria x ananassa HOM05D002570 ORTHO05D002689 1.2e-07 60.8 111 35.1
CsaV3_7G031670 Cucumis sativus L. HOM05D002570 ORTHO05D002689 1.6e-07 60.5 72 43.1
Gorai.011G053600 Gossypium raimondii HOM05D002570 ORTHO05D002689 1.6e-07 60.5 111 35.1
MD17G1229300 Malus domestica HOM05D002570 ORTHO05D002689 1.6e-07 60.5 115 37.4
Prupe.3G106900 Prunus persica HOM05D002570 ORTHO05D002689 1.6e-07 60.5 108 36.1
Hma1.2p1_0235F.1_g098980 Hydrangea macrophylla HOM05D002570 ORTHO05D002689 2.1e-07 60.1 80 42.5
Peaxi162Scf00314g00938 Petunia axillaris HOM05D002570 ORTHO05D002689 2.8e-07 59.7 114 35.1
RcHm_v2.0_Chr2g0131671 Rosa chinensis HOM05D002570 ORTHO05D002689 3.6e-07 59.3 65 47.7
CiPaw.01G051100 Carya illinoinensis HOM05D002570 ORTHO05D002689 4.7e-07 58.9 108 38.0
FAN09G2432 Fragaria x ananassa HOM05D002570 ORTHO05D002689 4.7e-07 58.9 111 34.2
Potri.001G037400 Populus trichocarpa HOM05D002570 ORTHO05D002689 4.7e-07 58.9 106 38.7
Ciclev10026849m.g Citrus clementina HOM05D002570 ORTHO05D002689 6.2e-07 58.5 101 35.6
Migut.I00642 Erythranthe guttata HOM05D002570 ORTHO05D002689 6.2e-07 58.5 65 43.1
Manes.04G097900 Manihot esculenta HOM05D002570 ORTHO05D002689 6.2e-07 58.5 75 41.3
Sed0010699 Sechium edule HOM05D002570 ORTHO05D002689 6.2e-07 58.5 69 43.5
MD09G1230400 Malus domestica HOM05D002570 ORTHO05D002689 8.1e-07 58.2 112 36.6
Oeu012866.1 Olea europaea HOM05D002570 ORTHO05D002689 8.1e-07 58.2 109 33.9
Sed0009460 Sechium edule HOM05D002570 ORTHO05D002689 8.1e-07 58.2 72 41.7
SGA_v2.0_scaffold74G24622 Striga asiatica HOM05D002570 ORTHO05D002689 8.1e-07 58.2 72 40.3
Atru.chr1.2751 Acer truncatum HOM05D002570 ORTHO05D002689 1.8e-06 57.0 72 41.7
Sc10g0008480 Simmondsia chinensis HOM05D002570 ORTHO05D002689 1.8e-06 57.0 72 38.9
CANSAT64G2315 Cannabis sativa HOM05D002570 ORTHO05D002689 3.1e-06 56.2 76 39.5
Haze_15246 Corylus avellana HOM05D002570 ORTHO05D002689 3.1e-06 56.2 108 34.3
Os04g0603400 Oryza sativa ssp. japonica HOM05D002570 ORTHO05D002689 3.1e-06 56.2 100 38.0
unitig_22.g6281 Utricularia gibba HOM05D002570 ORTHO05D002689 3.1e-06 56.2 70 37.1
Zm00001eb071700 Zea mays HOM05D002570 ORTHO05D002689 3.1e-06 56.2 98 35.7
HanXRQChr02g0033781 Helianthus annuus HOM05D002570 ORTHO05D002689 4.0e-06 55.8 65 43.1
Lsat_1_v5_gn_1_30640 Lactuca sativa HOM05D002570 ORTHO05D002689 4.0e-06 55.8 106 34.0
Phvul.005G184200 Phaseolus vulgaris HOM05D002570 ORTHO05D002689 4.0e-06 55.8 55 49.1
unitig_8.g3045 Utricularia gibba HOM05D002570 ORTHO05D002689 4.0e-06 55.8 76 35.5
Zm00001eb430390 Zea mays HOM05D002570 ORTHO05D002689 5.2e-06 55.5 93 34.4
Glyma.13G371800 Glycine max HOM05D002570 ORTHO05D002689 6.8e-06 55.1 102 36.3
Eucgr.J03139 Eucalyptus grandis HOM05D002570 ORTHO05D002689 8.9e-06 54.7 112 33.9


User provided reference genes

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