Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 0.0e+00 1868.6 978 100.0
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 0.0e+00 1491.5 978 82.8
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 0.0e+00 1388.6 979 77.6
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 0.0e+00 1371.3 978 76.6
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 0.0e+00 1143.3 987 65.1
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 0.0e+00 1127.1 980 64.2
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 6.6e-302 1040.8 950 60.4
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 8.4e-297 1023.8 980 59.1
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 6.6e-294 1014.2 1067 55.4
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 3.3e-293 1011.9 978 58.5
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 9.9e-290 1000.3 983 58.7
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 4.2e-288 995.0 984 57.7
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 1.6e-287 993.0 987 56.9
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 2.1e-287 992.6 981 57.1
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 1.3e-286 989.9 993 56.5
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.1e-286 988.0 983 58.1
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 1.1e-285 986.9 987 56.2
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.8e-284 982.2 983 57.2
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 8.1e-284 980.7 962 57.8
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 1.1e-283 980.3 989 56.8
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.8e-283 979.5 982 56.7
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 1.2e-282 976.9 987 55.9
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.7e-281 973.0 983 57.7
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 2.4e-280 969.1 987 55.7
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 3.0e-278 962.2 986 56.0
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 1.5e-277 959.9 945 56.5
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 5.6e-277 958.0 976 56.1
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.3e-276 956.8 988 55.1
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 3.7e-276 955.3 987 54.8
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 4.0e-275 951.8 983 55.7
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.2e-273 946.0 982 55.0
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.1e-272 943.7 987 55.2
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 5.5e-272 941.4 971 55.0
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.2e-271 940.3 985 55.3
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 2.1e-271 939.5 977 55.2
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.1e-271 939.5 956 56.7
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 3.3e-269 932.2 980 54.3
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 6.9e-267 924.5 978 55.1
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 9.0e-267 924.1 1028 52.2
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 5.0e-265 918.3 980 53.7
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 3.9e-262 908.7 832 60.8
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.7e-260 902.1 982 52.5
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 1.7e-257 893.3 975 53.1
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 1.1e-256 890.6 985 53.1
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 1.9e-256 889.8 984 53.3
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 7.9e-255 884.4 984 53.2
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 7.9e-255 884.4 952 52.7
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 7.9e-255 884.4 977 53.0
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 1.0e-254 884.0 975 52.5
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 3.9e-254 882.1 988 53.1
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 1.1e-253 880.6 971 52.6
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 5.7e-253 878.2 984 53.0
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 4.8e-252 875.2 980 51.6
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 8.2e-252 874.4 980 51.6
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 4.5e-250 868.6 980 51.5
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 2.9e-249 865.9 978 52.4
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.9e-249 865.9 980 51.4
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 6.5e-249 864.8 952 52.5
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 8.0e-247 857.8 995 52.0
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 7.4e-245 851.3 1038 49.5
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 4.8e-244 848.6 943 52.6
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 1.0e-241 840.9 982 50.0
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 4.2e-232 808.9 964 49.7
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 5.5e-232 808.5 950 50.2
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 9.4e-232 807.7 991 48.6
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 2.1e-231 806.6 656 66.8
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 1.0e-230 804.3 984 51.0
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 1.4e-230 803.9 950 50.0
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 3.0e-230 802.7 982 49.8
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 7.5e-229 798.1 977 48.4
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 4.1e-227 792.3 976 49.0
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 2.7e-226 789.6 975 47.9
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 4.5e-226 788.9 975 49.0
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 2.3e-225 786.6 957 48.8
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 3.8e-225 785.8 918 50.5
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 8.6e-225 784.6 978 48.5
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.6e-223 780.4 975 47.8
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 1.0e-222 777.7 977 48.0
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 3.0e-222 776.2 977 47.8
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 4.4e-221 772.3 981 47.8
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 9.8e-221 771.2 982 47.9
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 1.3e-220 770.8 958 48.9
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 1.3e-220 770.8 951 49.0
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 2.2e-220 770.0 983 48.8
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 4.9e-220 768.8 1056 45.3
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 4.5e-218 762.3 955 48.3
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 1.7e-217 760.4 956 48.2
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 3.6e-215 752.7 978 49.6
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 6.1e-215 751.9 948 47.8
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 8.9e-214 748.0 826 53.0
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.7e-212 743.8 954 47.2
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 1.1e-211 741.1 954 47.8
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 4.6e-210 735.7 969 47.2
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 1.2e-205 721.1 964 47.1
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.7e-204 717.2 947 47.4
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 3.7e-204 716.1 655 61.4
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.4e-203 713.4 654 59.8
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 6.6e-201 705.3 976 45.4
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 8.6e-201 704.9 953 46.0
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.6e-199 700.7 653 58.5
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 2.8e-199 699.9 982 46.3
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 6.2e-199 698.7 956 46.0
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 1.1e-198 698.0 985 45.2
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 6.8e-198 695.3 599 63.9
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 4.1e-195 686.0 977 44.2
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 2.3e-193 680.2 977 43.9
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 3.0e-193 679.9 950 44.5
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 6.6e-193 678.7 951 44.5
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 1.6e-191 674.1 803 51.3
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.4e-190 671.0 832 48.4
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.8e-190 670.6 951 45.0
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 1.8e-190 670.6 976 43.9
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 5.2e-190 669.1 645 57.4
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 5.8e-189 665.6 971 44.4
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 1.4e-187 661.0 982 42.8
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 6.6e-185 652.1 959 44.3
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 1.5e-184 651.0 980 42.4
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 2.5e-184 650.2 990 43.0
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 1.6e-183 647.5 974 43.0
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 2.4e-182 643.7 652 55.8
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 1.5e-181 641.0 955 42.7
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 2.2e-180 637.1 955 43.6
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 4.9e-180 636.0 970 42.8
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 5.4e-179 632.5 978 41.6
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 1.2e-178 631.3 646 56.0
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 1.1e-176 624.8 957 41.6
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 1.3e-172 611.3 648 54.0
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 5.4e-171 605.9 979 41.5
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 3.7e-167 593.2 944 40.9
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 1.7e-164 584.3 945 40.8
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 2.2e-164 583.9 948 41.5
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.8e-161 574.3 986 39.1
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 3.2e-155 553.5 952 38.9
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 6.7e-153 545.8 950 38.6
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 4.1e-150 536.6 663 50.1
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 2.2e-148 530.8 983 39.1
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 7.7e-141 505.8 954 37.9
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 8.2e-135 485.7 874 39.2
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 4.2e-131 473.4 983 35.2
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 3.8e-124 450.3 693 42.6
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 2.5e-123 447.6 692 42.3
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 7.2e-123 446.0 439 56.3
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 8.8e-113 412.5 915 34.1
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 8.8e-113 412.5 968 33.1
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 2.2e-111 407.9 667 39.9
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.2e-109 402.1 951 32.3
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 1.0e-108 399.1 949 32.7
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 3.6e-106 390.6 466 47.9
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 3.5e-85 320.9 880 34.1
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-69 268.5 672 30.8
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.0e-60 239.6 558 36.6
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.8e-49 202.2 194 55.2
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.2e-46 191.4 322 42.5
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.5e-43 181.8 118 74.6
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 5.7e-43 180.6 260 45.0
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 1.3e-42 179.5 459 33.3
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 1.4e-41 176.0 164 61.0
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 4.5e-40 171.0 302 38.7
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 1.7e-39 169.1 199 46.2
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 2.2e-39 168.7 100 84.0
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 3.8e-39 167.9 199 46.2
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 1.4e-38 166.0 197 45.2
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 1.9e-38 165.6 100 83.0
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.9e-38 165.6 236 43.6
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 1.6e-37 162.5 117 70.9
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 4.6e-37 161.0 435 30.8
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.2e-32 146.4 144 57.6
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 8.2e-26 123.6 196 37.2
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 9.1e-25 120.2 118 55.1
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 1.2e-24 119.8 118 58.5
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.3e-19 101.7 154 40.9
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 5.7e-19 100.9 51 94.1
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.7e-18 99.4 121 44.6
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.8e-17 95.9 75 62.7
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 4.1e-17 94.7 119 51.3
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 4.1e-17 94.7 155 44.5
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.8e-15 88.2 141 46.1
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 4.0e-12 78.2 73 53.4
Manes.17G022150 Manihot esculenta HOM05D003622 ORTHO05D000708 2.4e-09 68.9 82 47.6
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 9.1e-09 67.0 51 62.7
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-08 66.2 145 31.0
MBI13_g02371_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D000708 5.9e-08 64.3 74 54.1
MBI13_g36809_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D240810 1.3e-07 63.2 47 55.3
MD02G1023900 Malus domestica HOM05D003622 ORTHO05D048666 4.2e-06 58.2 114 33.3
Actinidia38716 Actinidia chinensis HOM05D003622 ORTHO05D004453 7.2e-06 57.4 42 61.9
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 7.2e-06 57.4 52 50.0


User provided reference genes

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