Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 1.0e-79 300.1 157 100.0
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 9.0e-60 233.8 160 84.4
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 7.4e-38 161.0 160 65.0
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 2.1e-32 142.9 164 60.4
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 2.7e-32 142.5 161 54.0
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 7.7e-27 124.4 160 48.1
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 5.5e-25 118.2 160 46.9
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 7.2e-25 117.9 162 50.6
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 6.1e-24 114.8 160 48.1
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 8.0e-24 114.4 160 45.0
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 1.4e-23 113.6 161 47.8
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 4.0e-23 112.1 184 41.3
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 5.2e-23 111.7 163 45.4
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 1.5e-22 110.2 159 45.3
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 2.8e-21 105.9 165 43.6
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 2.8e-21 105.9 170 49.4
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 4.8e-21 105.1 161 44.7
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 1.4e-20 103.6 161 45.3
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 1.6e-19 100.1 169 44.4
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 2.0e-19 99.8 157 45.9
Gohir.D05G013100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 2.7e-19 99.4 163 42.9
Gorai.009G013100 Gossypium raimondii HOM05D007673 ORTHO05D009278 2.7e-19 99.4 163 42.9
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 3.5e-19 99.0 161 46.0
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 5.9e-19 98.2 159 45.3
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 1.3e-18 97.1 164 42.7
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 1.7e-18 96.7 157 41.4
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 1.7e-18 96.7 159 44.7
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 1.7e-18 96.7 161 42.9
Gohir.A05G012100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 5.0e-18 95.1 163 41.7
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 8.6e-18 94.4 160 43.1
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 1.1e-17 94.0 160 43.8
FAN28G1648 Fragaria x ananassa HOM05D022859 ORTHO05D009278 1.2e-16 90.5 163 47.2
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 2.1e-16 89.7 163 47.2
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 6.1e-16 88.2 162 40.7
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 1.8e-15 86.7 157 42.0
Solyc07g007270.3 Solanum lycopersicum HOM05D007673 ORTHO05D009278 5.2e-15 85.1 163 38.7
Medtr4g116360 Medicago truncatula HOM05D007673 ORTHO05D009278 8.9e-15 84.3 164 43.3
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 1.2e-14 84.0 156 41.0
Phvul.003G173600 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 2.6e-14 82.8 160 42.5
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 4.4e-14 82.0 176 42.6
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 2.2e-13 79.7 159 41.5
Sopen07g003330 Solanum pennellii HOM05D007673 ORTHO05D009278 2.8e-13 79.3 165 36.4
CAN.G877.9 Capsicum annuum HOM05D007673 ORTHO05D009278 3.7e-13 79.0 164 37.2
VMungo1215G2163 Vigna mungo HOM05D007673 ORTHO05D009278 3.7e-13 79.0 159 37.7
Peaxi162Scf00108g00316 Petunia axillaris HOM05D007673 ORTHO05D009278 6.3e-13 78.2 161 38.5
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 1.1e-12 77.4 163 38.7
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 1.8e-12 76.6 166 39.8
Potri.006G059900 Populus trichocarpa HOM05D012006 ORTHO05D014172 2.4e-12 76.3 85 60.0
Psat0s503g0080 Pisum sativum HOM05D007673 ORTHO05D009278 3.1e-12 75.9 159 39.6
Psat0s5432g0040 Pisum sativum HOM05D007673 ORTHO05D009278 3.1e-12 75.9 159 39.6
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 4.1e-12 75.5 166 40.4
vmacro21889 Vaccinium macrocarpon HOM05D007673 ORTHO05D009278 4.1e-12 75.5 186 34.4
Cc06_g07510 Coffea canephora HOM05D007673 ORTHO05D009278 7.0e-12 74.7 169 39.1
Nitab4.5_0008829g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 9.2e-12 74.3 139 41.0
Nitab4.5_0003305g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 1.2e-11 73.9 139 37.4
FAN26G0562 Fragaria x ananassa HOM05D022859 ORTHO05D009278 4.5e-11 72.0 208 37.5
TPR.G15789 Trifolium pratense HOM05D007673 ORTHO05D009278 7.8e-11 71.2 165 41.8
FAN19G1896 Fragaria x ananassa HOM05D022859 ORTHO05D009278 1.7e-10 70.1 203 37.9
PSO017G0897 Papaver somniferum HOM05D007673 ORTHO05D009278 2.3e-10 69.7 166 31.9
PSO170G6343 Papaver somniferum HOM05D007673 ORTHO05D009278 5.0e-10 68.6 168 31.5
arahy.Tifrunner.gnm1.ann1.5L22XG Arachis hypogaea HOM05D007673 ORTHO05D009278 6.6e-10 68.2 166 35.5
Oeu051709.1 Olea europaea HOM05D007673 ORTHO05D009278 1.9e-09 66.6 151 39.7
Migut.J01263 Erythranthe guttata HOM05D007673 ORTHO05D009278 3.3e-09 65.9 161 39.8
HanXRQChr09g0243101 Helianthus annuus HOM05D007673 ORTHO05D009278 3.3e-09 65.9 158 38.0
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 4.3e-09 65.5 161 37.3
CsaV3_1G028420 Cucumis sativus L. HOM05D007673 ORTHO05D009278 9.5e-09 64.3 150 38.0
Sc14g0000100 Simmondsia chinensis HOM05D052917 ORTHO05D009278 2.8e-08 62.8 166 33.7
EL10Ac8g18805 Beta vulgaris HOM05D022392 ORTHO05D009278 3.6e-08 62.4 171 38.0
Sed0013238 Sechium edule HOM05D007673 ORTHO05D009278 4.7e-08 62.0 149 32.2
Atru.chr7.275 Acer truncatum HOM05D007673 ORTHO05D009278 1.0e-07 60.8 173 35.8
Oeu055924.1 Olea europaea HOM05D007673 ORTHO05D009278 1.0e-07 60.8 154 37.0
ECA240G3592 Erigeron canadensis HOM05D007673 ORTHO05D009278 1.4e-07 60.5 167 36.5
Lsat_1_v5_gn_7_45981 Lactuca sativa HOM05D007673 ORTHO05D009278 1.4e-07 60.5 160 31.9
Sabra06G0043200 Salix brachista HOM05D012006 ORTHO05D014172 4.0e-07 58.9 93 47.3
HPP92_017273 Vanilla planifolia HOM05D007673 ORTHO05D009278 4.0e-07 58.9 152 32.9
Psat4g035400 Pisum sativum HOM05D007673 ORTHO05D009278 6.8e-07 58.2 161 36.0
VMungo1309G0908 Vigna mungo HOM05D007673 ORTHO05D009278 6.8e-07 58.2 161 33.5
MBI15_g28791_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 8.9e-07 57.8 127 35.4
Dinv42922 Davidia involucrata HOM05D012006 ORTHO05D014172 1.2e-06 57.4 78 48.7
Lsat_1_v5_gn_8_63020 Lactuca sativa HOM05D007673 ORTHO05D009278 1.2e-06 57.4 98 40.8
DCAR_014921 Daucus carota HOM05D007673 ORTHO05D009278 2.0e-06 56.6 88 44.3
Eucgr.C04106 Eucalyptus grandis HOM05D007673 ORTHO05D009278 2.0e-06 56.6 94 40.4
arahy.Tifrunner.gnm1.ann1.L2N39S Arachis hypogaea HOM05D007673 ORTHO05D009278 2.6e-06 56.2 166 31.3
HanXRQChr12g0357061 Helianthus annuus HOM05D030613 ORTHO05D029296 3.4e-06 55.8 160 31.9
SalBow1G4427 Salvia bowleyana HOM05D007673 ORTHO05D009278 4.4e-06 55.5 160 38.8
AUR62041460 Chenopodium quinoa HOM05D022392 ORTHO05D009278 5.8e-06 55.1 176 31.8
AUR62011243 Chenopodium quinoa HOM05D022392 ORTHO05D009278 7.5e-06 54.7 178 33.1
Gohir.D06G050300 Gossypium hirsutum HOM05D012006 ORTHO05D014172 9.8e-06 54.3 77 45.5
Gorai.010G057200 Gossypium raimondii HOM05D012006 ORTHO05D014172 9.8e-06 54.3 77 45.5


User provided reference genes

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