Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 1.5e-144 516.2 266 100.0
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 1.0e-119 433.7 245 91.0
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 4.7e-85 318.5 238 68.9
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 4.3e-78 295.4 251 63.7
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 9.5e-78 294.3 239 62.3
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 2.1e-77 293.1 239 62.3
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 5.2e-76 288.5 240 62.9
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 8.9e-76 287.7 227 65.2
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 8.9e-76 287.7 239 61.5
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 4.4e-75 285.4 255 58.8
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 1.3e-74 283.9 250 60.0
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 4.9e-74 282.0 233 63.1
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 3.9e-71 272.3 233 61.8
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 5.1e-71 271.9 228 63.6
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 1.5e-70 270.4 233 61.4
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 2.1e-69 266.5 248 57.3
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 2.1e-69 266.5 250 57.2
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 3.6e-69 265.8 247 57.1
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 8.1e-69 264.6 235 60.9
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 8.1e-69 264.6 247 57.1
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 8.1e-69 264.6 243 60.9
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 1.4e-68 263.8 244 59.0
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 1.4e-68 263.8 262 58.0
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 3.1e-68 262.7 246 59.3
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 5.2e-68 261.9 232 60.3
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 6.9e-68 261.5 241 59.3
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 2.6e-67 259.6 258 55.4
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 9.9e-67 257.7 235 59.6
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 9.9e-67 257.7 236 58.1
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 1.3e-66 257.3 237 59.5
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 1.7e-66 256.9 232 60.3
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 1.7e-66 256.9 232 60.3
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 2.2e-66 256.5 228 59.6
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 1.1e-65 254.2 230 60.0
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 1.4e-65 253.8 247 58.3
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 1.9e-65 253.4 236 57.2
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 2.4e-65 253.1 246 59.8
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 3.2e-65 252.7 246 55.7
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 7.1e-65 251.5 256 54.7
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 1.6e-64 250.4 237 57.0
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 2.1e-64 250.0 245 56.7
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 2.7e-64 249.6 260 55.4
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 4.6e-64 248.8 244 57.0
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 7.8e-64 248.1 252 54.8
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 1.7e-63 246.9 233 56.2
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 9.6e-62 241.1 246 56.5
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 6.4e-58 228.4 245 53.9
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.1e-57 227.6 252 50.8
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 1.0e-55 221.1 245 52.2
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.1e-54 217.6 227 53.7
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 3.3e-54 216.1 202 55.9
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 9.6e-54 214.5 252 48.8
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 9.6e-54 214.5 264 47.7
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 9.0e-52 208.0 245 47.8
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 1.2e-51 207.6 235 47.7
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 4.5e-51 205.7 236 50.4
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 4.5e-51 205.7 235 47.2
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 9.9e-51 204.5 248 45.6
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 1.3e-50 204.1 235 47.2
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 1.7e-50 203.8 233 46.8
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 2.2e-50 203.4 255 48.2
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.9e-50 203.0 290 42.8
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 8.4e-50 201.4 246 44.7
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 1.1e-49 201.1 242 47.1
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 1.1e-49 201.1 246 45.9
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 1.4e-49 200.7 238 47.1
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 3.2e-49 199.5 235 50.6
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 3.2e-49 199.5 242 48.8
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 5.5e-49 198.7 261 43.7
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 5.5e-49 198.7 258 45.7
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 7.1e-49 198.4 224 49.6
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 2.3e-47 193.4 243 48.1
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 3.9e-47 192.6 258 42.2
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 5.1e-47 192.2 237 48.9
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 1.9e-46 190.3 256 47.7
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 7.4e-46 188.3 237 46.8
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 1.3e-45 187.6 235 46.8
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 2.1e-45 186.8 230 47.4
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 4.5e-43 179.1 237 44.3
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 5.7e-38 162.2 240 42.1
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 7.4e-38 161.8 160 55.0
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 6.9e-36 155.2 237 43.5
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.0e-34 151.4 144 56.2
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 1.7e-34 150.6 244 40.2
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.1e-33 147.9 144 54.9
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 7.2e-33 145.2 142 56.3
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 1.0e-31 141.4 288 34.7
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 1.0e-31 141.4 290 34.1
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 6.7e-31 138.7 248 39.9
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.1e-30 137.9 252 39.7
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 1.5e-30 137.5 333 32.1
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 2.5e-30 136.7 261 38.3
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 1.5e-27 127.5 124 52.4
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 1.4e-25 120.9 224 36.2
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 2.1e-24 117.1 103 55.3
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 6.7e-23 112.1 97 58.8
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 1.3e-21 107.8 192 38.5
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 1.1e-20 104.8 228 34.2
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 4.7e-16 89.4 153 36.6
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 1.4e-15 87.8 176 34.7
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.4e-15 87.8 146 39.0
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 4.5e-11 72.8 70 52.9
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 1.7e-10 70.9 62 62.9
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.2e-06 58.2 118 33.9


User provided reference genes

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