Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 5.1e-125 451.1 224 100.0
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.1e-65 253.1 141 89.4
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.3e-43 180.6 110 80.9
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 3.4e-36 156.0 141 58.9
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 2.9e-35 152.9 142 57.7
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 8.4e-35 151.4 143 60.1
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 1.1e-34 151.0 142 58.5
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 2.4e-34 149.8 139 59.7
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 1.2e-33 147.5 147 53.7
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 6.0e-33 145.2 141 55.3
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.3e-32 144.1 153 52.3
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.3e-32 144.1 140 55.0
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 1.3e-32 144.1 140 55.0
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 2.3e-32 143.3 139 54.7
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 3.0e-32 142.9 142 55.6
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 3.9e-32 142.5 130 62.3
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 8.7e-32 141.4 136 52.2
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 7.4e-31 138.3 136 57.4
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 2.1e-30 136.7 139 54.0
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 2.8e-30 136.3 141 52.5
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.8e-29 133.7 139 52.5
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 2.4e-29 133.3 135 60.0
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 2.4e-29 133.3 136 56.6
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.4e-29 133.3 136 56.6
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 9.0e-29 131.3 136 55.1
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 9.0e-29 131.3 129 57.4
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 2.6e-28 129.8 142 51.4
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 1.0e-27 127.9 131 55.7
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 2.2e-27 126.7 144 50.7
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 3.8e-27 125.9 120 57.5
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 3.8e-27 125.9 132 56.1
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.8e-27 125.9 126 59.5
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 3.8e-27 125.9 138 50.7
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 3.8e-27 125.9 121 57.9
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 4.9e-27 125.6 141 46.8
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 6.5e-27 125.2 133 51.1
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 8.4e-27 124.8 133 54.1
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.1e-26 124.4 124 58.9
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 1.4e-26 124.0 143 52.4
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 1.4e-26 124.0 119 59.7
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 2.5e-26 123.2 111 60.4
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 7.1e-26 121.7 136 50.0
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 9.3e-26 121.3 73 83.6
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 1.2e-25 120.9 134 51.5
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 2.1e-25 120.2 127 55.1
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 2.7e-25 119.8 129 50.4
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 6.0e-25 118.6 117 57.3
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 6.0e-25 118.6 67 83.6
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 1.0e-24 117.9 124 54.0
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 1.3e-24 117.5 139 47.5
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 1.8e-24 117.1 72 76.4
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 3.9e-24 115.9 144 48.6
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 3.9e-24 115.9 115 53.0
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 3.9e-24 115.9 115 53.9
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 5.1e-24 115.5 146 47.3
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 6.7e-24 115.2 122 55.7
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.3e-23 112.8 67 80.6
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 4.3e-23 112.5 135 47.4
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 1.3e-22 110.9 69 76.8
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 1.6e-22 110.5 126 49.2
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 1.6e-22 110.5 98 59.2
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 1.6e-22 110.5 123 54.5
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 2.1e-22 110.2 127 51.2
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 4.8e-22 109.0 71 70.4
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 1.8e-21 107.1 76 67.1
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 2.4e-21 106.7 137 44.5
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 4.1e-21 105.9 116 53.4
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 4.1e-21 105.9 125 48.0
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 1.2e-20 104.4 67 73.1
Sabra16G0048800 Salix brachista HOM05D005503 ORTHO05D008949 1.5e-20 104.0 140 47.1
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 2.0e-20 103.6 65 73.8
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 2.0e-20 103.6 98 55.1
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 2.6e-20 103.2 69 69.6
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 2.6e-20 103.2 61 77.0
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 2.6e-20 103.2 77 62.3
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 3.4e-20 102.8 69 71.0
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 5.9e-20 102.1 67 71.6
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 5.9e-20 102.1 63 74.6
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 5.9e-20 102.1 63 74.6
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 5.9e-20 102.1 67 71.6
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 5.9e-20 102.1 63 76.2
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 7.6e-20 101.7 67 71.6
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 1.3e-19 100.9 128 47.7
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 2.2e-19 100.1 127 46.5
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 2.2e-19 100.1 63 76.2
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 2.2e-19 100.1 74 66.2
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 2.9e-19 99.8 77 61.0
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 2.9e-19 99.8 81 56.8
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 5.0e-19 99.0 63 74.6
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 6.5e-19 98.6 77 61.0
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 6.5e-19 98.6 77 61.0
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 6.5e-19 98.6 77 61.0
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 8.5e-19 98.2 63 73.0
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.1e-18 97.8 83 57.8
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 1.1e-18 97.8 64 70.3
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 2.5e-18 96.7 77 58.4
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 7.2e-18 95.1 83 60.2
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 9.3e-18 94.7 153 41.8
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 5.1e-16 89.0 116 45.7
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 6.7e-16 88.6 92 48.9
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 8.7e-16 88.2 71 56.3
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 4.3e-15 85.9 63 65.1
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 4.3e-15 85.9 63 65.1
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 7.4e-15 85.1 70 55.7
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 1.1e-13 81.3 73 58.9
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 4.1e-13 79.3 57 68.4
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 1.5e-12 77.4 70 48.6
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.4e-10 70.9 60 53.3
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.1e-07 61.2 92 44.6
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.5e-07 60.8 92 45.7


User provided reference genes

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