Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0028300 Salix brachista HOM05D008360 ORTHO05D010532 3.0e-37 157.9 76 100.0
Potri.006G041600 Populus trichocarpa HOM05D008360 ORTHO05D010532 4.6e-17 90.9 44 97.7
Potri.016G038300 Populus trichocarpa HOM05D008360 ORTHO05D010532 3.6e-14 81.3 43 86.0
CiPaw.09G045700 Carya illinoinensis HOM05D008360 ORTHO05D010532 2.0e-12 75.5 44 75.0
AUR62031993 Chenopodium quinoa HOM05D000009 ORTHO05D000008 9.9e-12 73.2 46 67.4
Dinv34381 Davidia involucrata HOM05D008360 ORTHO05D010532 3.8e-11 71.2 47 66.0
RcHm_v2.0_Chr3g0476891 Rosa chinensis HOM05D008360 ORTHO05D010532 4.9e-11 70.9 44 70.5
Duzib093G1186 Durio zibethinus HOM05D008360 ORTHO05D010532 6.4e-11 70.5 44 65.9
RcHm_v2.0_Chr3g0476991 Rosa chinensis HOM05D008360 ORTHO05D010532 8.4e-11 70.1 43 72.1
FAN14G5043 Fragaria x ananassa HOM05D008360 ORTHO05D010532 1.4e-10 69.3 44 68.2
Hund24629 Selenicereus undatus HOM05D008360 ORTHO05D010532 1.4e-10 69.3 44 65.9
Thecc.05G140600 Theobroma cacao HOM05D008360 ORTHO05D010532 1.4e-10 69.3 44 65.9
FAN09G2365 Fragaria x ananassa HOM05D008360 ORTHO05D010532 2.4e-10 68.6 44 68.2
Hma1.2p1_1048F.1_g251690 Hydrangea macrophylla HOM05D008360 ORTHO05D010532 3.2e-10 68.2 44 65.9
Nitab4.5_0002162g0190 Nicotiana tabacum HOM05D008360 ORTHO05D010532 3.2e-10 68.2 44 63.6
Solyc04g040000.2 Solanum lycopersicum HOM05D008360 ORTHO05D010532 3.2e-10 68.2 66 50.0
Duzib106G1984 Durio zibethinus HOM05D008360 ORTHO05D010532 4.1e-10 67.8 44 63.6
Cc06_g18840 Coffea canephora HOM05D008360 ORTHO05D010532 5.4e-10 67.4 44 63.6
Manes.09G007500 Manihot esculenta HOM05D008360 ORTHO05D010532 5.4e-10 67.4 44 63.6
arahy.Tifrunner.gnm1.ann1.LHUB84 Arachis hypogaea HOM05D008360 ORTHO05D010532 7.1e-10 67.0 66 50.0
Prupe.7G043000 Prunus persica HOM05D008360 ORTHO05D010532 1.2e-09 66.2 44 63.6
CAN.G1237.40 Capsicum annuum HOM05D008360 ORTHO05D010532 2.7e-09 65.1 44 61.4
ECA248G1201 Erigeron canadensis HOM05D001008 ORTHO05D009098 2.7e-09 65.1 44 61.4
Lalb_Chr25g0286871 Lupinus albus HOM05D008360 ORTHO05D010532 6.0e-09 63.9 44 68.2
Lj1g0003695 Lotus japonicus HOM05D008360 ORTHO05D010532 1.0e-08 63.2 48 56.2
Manes.08G057500 Manihot esculenta HOM05D008360 ORTHO05D010532 1.0e-08 63.2 44 59.1
COL.COLO4_37957 Corchorus olitorius HOM05D008360 ORTHO05D010532 1.7e-08 62.4 44 61.4
Phvul.001G125600 Phaseolus vulgaris HOM05D008360 ORTHO05D010532 2.3e-08 62.0 44 63.6
Aa31LG10G11990 Aethionema arabicum HOM05D008360 ORTHO05D010532 6.6e-08 60.5 44 63.6
Migut.K00128 Erythranthe guttata HOM05D008360 ORTHO05D010532 6.6e-08 60.5 41 61.0
unitig_8.g3490 Utricularia gibba HOM05D008360 ORTHO05D010532 1.5e-07 59.3 44 54.5
Carub.0005s2387 Capsella rubella HOM05D008360 ORTHO05D010532 2.5e-07 58.5 44 59.1
Gohir.A09G118500 Gossypium hirsutum HOM05D008360 ORTHO05D010532 3.3e-07 58.2 44 59.1
Gohir.D09G115400 Gossypium hirsutum HOM05D008360 ORTHO05D010532 3.3e-07 58.2 44 59.1
Gorai.006G133100 Gossypium raimondii HOM05D008360 ORTHO05D010532 3.3e-07 58.2 44 59.1
Medtr7g090260 Medicago truncatula HOM05D008360 ORTHO05D010532 3.3e-07 58.2 76 42.1
AL5G38550 Arabidopsis lyrata HOM05D008360 ORTHO05D010532 4.3e-07 57.8 44 59.1
AT3G57062 Arabidopsis thaliana HOM05D008360 ORTHO05D010532 4.3e-07 57.8 44 59.1
A09p49990 Brassica napus HOM05D008360 ORTHO05D010532 4.3e-07 57.8 44 61.4
C08p32400 Brassica napus HOM05D008360 ORTHO05D010532 4.3e-07 57.8 44 61.4
BolC8t50854H Brassica oleracea HOM05D008360 ORTHO05D010532 4.3e-07 57.8 44 61.4
BraA09t40449Z Brassica rapa HOM05D008360 ORTHO05D010532 4.3e-07 57.8 44 61.4
CARHR167260 Cardamine hirsuta HOM05D008360 ORTHO05D010532 4.3e-07 57.8 44 59.1
CSS0042665 Camellia sinensis var. sinensis HOM05D008360 ORTHO05D010532 5.6e-07 57.4 44 54.5
Thhalv10006358m.g Eutrema salsugineum HOM05D008360 ORTHO05D010532 9.6e-07 56.6 44 59.1
PSO384G3670 Papaver somniferum HOM05D008360 ORTHO05D010532 1.6e-06 55.8 42 54.8
THA.LOC104824413 Tarenaya hassleriana HOM05D008360 ORTHO05D010532 2.1e-06 55.5 44 54.5
Hma1.2p1_1048F.1_g251680 Hydrangea macrophylla HOM05D008360 ORTHO05D010532 3.6e-06 54.7 44 54.5
Migut.J01675 Erythranthe guttata HOM05D008360 ORTHO05D010532 6.2e-06 53.9 43 55.8


User provided reference genes

Program Settings