Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0026200 Salix brachista HOM05D002974 ORTHO05D002992 4.3e-54 214.5 120 100.0
Potri.006G038900 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.6e-43 178.7 118 81.4
Sabra16G0038800 Salix brachista HOM05D002974 ORTHO05D002992 3.2e-33 145.2 118 69.5
Potri.016G036600 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.2e-32 143.3 119 70.6
CiPaw.10G040200 Carya illinoinensis HOM05D002974 ORTHO05D002992 5.9e-19 97.8 125 48.8
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 1.7e-18 96.3 117 47.9
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 1.9e-17 92.8 118 49.2
Thecc.05G134100 Theobroma cacao HOM05D002974 ORTHO05D002992 2.5e-17 92.4 124 52.4
QL07p010402 Quercus lobata HOM05D002974 ORTHO05D002992 9.4e-17 90.5 124 53.2
Manes.09G004900 Manihot esculenta HOM05D002974 ORTHO05D002992 1.8e-15 86.3 126 48.4
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 4.0e-15 85.1 113 50.4
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 1.2e-14 83.6 118 53.4
COL.COLO4_04711 Corchorus olitorius HOM05D002974 ORTHO05D002992 9.8e-14 80.5 122 46.7
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 2.2e-13 79.3 122 45.1
Dinv06180 Davidia involucrata HOM05D002974 ORTHO05D002992 1.8e-12 76.3 104 44.2
Lalb_Chr22g0357431 Lupinus albus HOM05D002974 ORTHO05D002992 1.8e-12 76.3 128 44.5
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 3.1e-12 75.5 119 44.5
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 4.1e-12 75.1 110 45.5
Lalb_Chr24g0400351 Lupinus albus HOM05D002974 ORTHO05D002992 9.1e-12 73.9 130 46.2
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.0e-10 70.5 119 44.5
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 1.3e-10 70.1 118 39.8
CiPaw.09G047800 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.7e-10 69.7 116 44.8
Eucgr.A02242 Eucalyptus grandis HOM05D002974 ORTHO05D002992 3.8e-10 68.6 117 41.9
Phvul.001G123400 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 5.0e-10 68.2 125 42.4
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 8.6e-10 67.4 114 43.0
Medtr7g089860 Medicago truncatula HOM05D002974 ORTHO05D002992 8.6e-10 67.4 127 42.5
CSS0032574 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 1.5e-09 66.6 120 41.7
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 4.2e-09 65.1 119 40.3
Gohir.A11G307100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 4.2e-09 65.1 123 42.3
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 4.2e-09 65.1 123 39.0
PGR031G3974 Punica granatum HOM05D002974 ORTHO05D002992 9.5e-09 63.9 135 41.5
SHI49841 Sapria himalayana HOM05D048774 ORTHO05D002992 9.5e-09 63.9 118 41.5
SHI50452 Sapria himalayana HOM05D048774 ORTHO05D002992 9.5e-09 63.9 118 41.5
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 1.2e-08 63.5 132 36.4
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 1.6e-08 63.2 120 40.8
Gorai.007G352700 Gossypium raimondii HOM05D002974 ORTHO05D002992 2.8e-08 62.4 123 41.5
MELO3C019076.2 Cucumis melo HOM05D002974 ORTHO05D002992 4.7e-08 61.6 118 48.3
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 8.0e-08 60.8 118 43.2
TPR.G8953 Trifolium pratense HOM05D002974 ORTHO05D002992 8.0e-08 60.8 125 39.2
ClCG04G004500 Citrullus lanatus HOM05D002974 ORTHO05D002992 1.4e-07 60.1 43 72.1
Glyma.19G130400 Glycine max HOM05D002974 ORTHO05D002992 1.4e-07 60.1 129 38.0
arahy.Tifrunner.gnm1.ann1.C03B5F Arachis hypogaea HOM05D002974 ORTHO05D002992 5.2e-07 58.2 147 38.8
ClCG10G016220 Citrullus lanatus HOM05D002974 ORTHO05D002992 6.8e-07 57.8 119 35.3
Oeu059346.1 Olea europaea HOM05D002974 ORTHO05D002992 6.8e-07 57.8 126 39.7
Sed0014788 Sechium edule HOM05D002974 ORTHO05D002992 6.8e-07 57.8 119 37.8
MELO3C009755.2 Cucumis melo HOM05D002974 ORTHO05D002992 1.2e-06 57.0 120 37.5
CsaV3_4G029660 Cucumis sativus L. HOM05D002974 ORTHO05D002992 1.5e-06 56.6 119 37.8
Dinv12041 Davidia involucrata HOM05D002974 ORTHO05D002992 2.0e-06 56.2 94 42.6
SalBow6G6653 Salvia bowleyana HOM05D002974 ORTHO05D002992 2.0e-06 56.2 45 62.2
Lj1g0016303 Lotus japonicus HOM05D002974 ORTHO05D002992 2.6e-06 55.8 118 39.8
TWI53G1119 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 2.6e-06 55.8 116 37.9
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 4.4e-06 55.1 139 32.4
Atru.chr1.1439 Acer truncatum HOM05D002974 ORTHO05D002992 5.7e-06 54.7 118 37.3
Psat3g078800 Pisum sativum HOM05D002974 ORTHO05D002992 5.7e-06 54.7 130 39.2
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 7.5e-06 54.3 124 36.3
Lsat_1_v5_gn_5_156980 Lactuca sativa HOM05D002974 ORTHO05D002992 9.8e-06 53.9 123 36.6


User provided reference genes

Program Settings