Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 6.0e-146 520.8 256 100.0
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 2.0e-117 426.0 257 84.4
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 7.5e-80 301.2 200 72.5
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 1.7e-79 300.1 212 69.3
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 3.2e-78 295.8 250 63.6
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.2e-77 293.9 250 62.8
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 1.6e-77 293.5 254 61.0
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 8.6e-76 287.7 247 58.7
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 1.6e-74 283.5 197 68.0
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 2.1e-74 283.1 250 58.0
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 2.3e-73 279.6 190 70.0
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 4.0e-73 278.9 192 66.1
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 4.0e-73 278.9 259 56.8
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 3.4e-72 275.8 195 68.2
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 5.8e-72 275.0 195 67.7
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 5.8e-72 275.0 233 59.7
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 7.5e-72 274.6 193 69.4
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 7.5e-72 274.6 195 67.7
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 1.7e-71 273.5 242 60.3
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 2.9e-71 272.7 248 57.7
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 2.9e-71 272.7 244 57.8
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 1.1e-70 270.8 263 56.3
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 1.4e-70 270.4 197 65.5
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 2.4e-70 269.6 199 69.8
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 4.1e-70 268.9 232 61.6
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 2.1e-69 266.5 245 56.3
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 6.0e-69 265.0 212 62.7
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 6.0e-69 265.0 228 61.4
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 6.0e-69 265.0 183 66.1
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 1.7e-68 263.5 261 51.0
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 8.6e-68 261.2 194 64.4
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 1.9e-67 260.0 251 55.0
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 1.9e-67 260.0 199 63.8
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 2.5e-67 259.6 193 62.7
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 2.5e-67 259.6 251 57.0
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 3.3e-67 259.2 203 63.5
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 3.3e-67 259.2 196 62.8
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 5.6e-67 258.5 225 58.2
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 1.2e-66 257.3 257 51.8
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 1.2e-66 257.3 225 56.4
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 1.2e-66 257.3 193 61.7
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 2.8e-66 256.1 250 54.0
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 2.8e-66 256.1 254 54.3
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 3.6e-66 255.8 193 63.2
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 1.1e-65 254.2 219 59.4
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 2.3e-65 253.1 177 66.1
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 6.8e-65 251.5 260 50.0
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 6.8e-65 251.5 230 56.1
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 8.9e-65 251.1 258 49.6
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 1.2e-64 250.8 262 49.6
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 1.2e-64 250.8 246 54.9
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 1.5e-64 250.4 261 49.4
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 2.0e-64 250.0 261 50.6
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 2.0e-64 250.0 232 55.2
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 2.6e-64 249.6 197 58.9
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 5.8e-64 248.4 237 55.7
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 7.5e-64 248.1 248 53.2
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 7.5e-64 248.1 169 66.9
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 1.3e-63 247.3 261 50.2
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 1.3e-63 247.3 213 56.8
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.3e-63 247.3 240 53.8
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.3e-63 247.3 227 55.1
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 2.2e-63 246.5 175 64.6
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 2.9e-63 246.1 227 55.5
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.7e-63 245.7 227 55.1
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 4.9e-63 245.4 174 66.7
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 3.2e-62 242.7 240 50.0
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 7.8e-61 238.0 182 61.0
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 1.3e-60 237.3 185 57.3
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 3.0e-60 236.1 261 51.7
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 1.1e-59 234.2 251 49.8
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 1.9e-59 233.4 194 57.2
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 3.3e-59 232.6 249 51.4
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 1.2e-58 230.7 247 49.8
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 1.2e-58 230.7 255 50.6
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 3.6e-58 229.2 210 59.5
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 8.1e-58 228.0 266 48.5
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 1.3e-55 220.7 194 58.2
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 2.1e-53 213.4 186 58.1
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 5.1e-52 208.8 190 56.3
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 3.6e-50 202.6 121 77.7
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 1.1e-49 201.1 194 53.1
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 5.4e-46 188.7 192 52.1
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 5.4e-46 188.7 234 44.9
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 2.1e-45 186.8 185 47.6
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.7e-45 186.4 128 71.1
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 3.5e-45 186.0 346 35.5
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 6.9e-41 171.8 193 45.6
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 9.6e-35 151.4 175 49.7
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 3.4e-32 142.9 113 61.1
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 7.1e-30 135.2 114 58.8
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 3.9e-28 129.4 163 44.8
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 1.9e-27 127.1 118 54.2
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 4.8e-18 95.9 80 61.2
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 4.8e-18 95.9 136 43.4
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 4.5e-16 89.4 68 61.8
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 6.5e-15 85.5 129 41.9
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 1.8e-12 77.4 56 67.9
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 3.9e-12 76.3 66 59.1


User provided reference genes

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