Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 9.6e-102 373.6 207 100.0
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 8.8e-79 297.4 207 79.7
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 7.7e-59 231.1 208 63.9
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 1.5e-57 226.9 211 66.8
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 1.5e-57 226.9 211 66.8
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 1.5e-57 226.9 209 65.6
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 5.5e-57 224.9 211 66.4
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 2.7e-56 222.6 209 65.6
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 5.7e-54 214.9 206 65.0
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 1.1e-52 210.7 213 60.6
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 2.4e-52 209.5 194 65.5
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 4.1e-52 208.8 211 62.1
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 1.2e-51 207.2 195 64.6
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.6e-51 206.8 196 58.7
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 2.0e-51 206.5 207 57.0
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 3.5e-51 205.7 215 59.5
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 4.5e-51 205.3 210 61.4
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 5.9e-51 204.9 216 56.5
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 7.7e-51 204.5 185 67.0
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 1.3e-50 203.8 183 64.5
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 1.3e-50 203.8 178 64.6
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 2.9e-50 202.6 172 69.2
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 2.5e-49 199.5 195 63.6
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 5.5e-49 198.4 170 68.8
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 5.5e-49 198.4 207 54.6
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 7.2e-49 198.0 174 64.9
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 9.5e-49 197.6 173 70.5
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 9.5e-49 197.6 207 56.0
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 1.2e-48 197.2 207 54.6
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 1.2e-48 197.2 205 60.5
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 1.6e-48 196.8 172 64.5
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 2.8e-48 196.1 126 92.1
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 8.0e-48 194.5 215 59.1
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 1.0e-47 194.1 174 66.7
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 1.8e-47 193.4 180 67.2
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 2.0e-46 189.9 172 60.5
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 3.4e-46 189.1 211 54.0
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 9.8e-46 187.6 222 52.3
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.8e-44 183.3 252 47.2
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 4.1e-44 182.2 164 65.9
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 5.4e-44 181.8 197 57.9
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 1.6e-43 180.3 187 59.9
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 1.0e-42 177.6 177 63.3
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 3.8e-42 175.6 156 69.9
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 6.6e-42 174.9 203 59.1
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 1.9e-41 173.3 149 72.5
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 5.6e-41 171.8 173 63.0
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 7.3e-41 171.4 203 58.6
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 2.8e-40 169.5 217 50.7
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 3.6e-40 169.1 202 53.5
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 2.3e-39 166.4 175 53.1
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 8.9e-39 164.5 149 62.4
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 8.9e-39 164.5 214 49.5
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 8.9e-39 164.5 170 54.7
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 2.0e-38 163.3 170 54.1
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 2.0e-38 163.3 147 63.9
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 4.4e-38 162.2 165 61.2
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 9.8e-38 161.0 176 56.8
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 9.8e-38 161.0 176 59.1
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 9.8e-38 161.0 218 52.3
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 1.3e-37 160.6 179 52.0
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 1.3e-37 160.6 210 48.6
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 4.9e-37 158.7 149 59.1
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 6.4e-37 158.3 159 62.9
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 7.0e-36 154.8 204 47.5
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 6.0e-35 151.8 173 55.5
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 1.0e-34 151.0 205 53.2
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 1.7e-34 150.2 176 55.7
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 8.6e-34 147.9 195 51.8
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 3.3e-33 146.0 181 52.5
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 7.3e-33 144.8 169 57.4
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 1.6e-32 143.7 206 51.9
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 3.6e-32 142.5 206 50.5
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 3.6e-32 142.5 206 50.5
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 4.7e-32 142.1 176 48.9
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 8.0e-32 141.4 210 43.8
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 1.1e-31 141.0 214 46.7
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 1.1e-31 141.0 209 45.0
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 1.4e-31 140.6 237 46.0
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 1.8e-31 140.2 152 54.6
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 4.0e-31 139.0 164 57.3
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 6.8e-31 138.3 195 51.3
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 6.8e-31 138.3 195 51.3
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 8.9e-31 137.9 148 59.5
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 1.5e-30 137.1 163 57.7
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 1.5e-30 137.1 163 57.7
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 2.0e-30 136.7 189 52.9
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 4.4e-30 135.6 172 47.7
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 5.8e-30 135.2 206 50.5
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 1.1e-28 131.0 145 57.2
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 2.4e-28 129.8 165 53.9
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 3.9e-26 122.5 126 56.3
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 4.3e-25 119.0 154 46.1
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 2.0e-22 110.2 160 51.2
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 1.9e-20 103.6 116 60.3
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 3.2e-20 102.8 139 50.4
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 2.3e-18 96.7 97 52.6
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 2.3e-18 96.7 97 52.6
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 3.0e-18 96.3 135 49.6
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 6.6e-18 95.1 211 31.8
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 1.5e-17 94.0 160 38.1
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.4e-15 87.4 201 38.8
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 5.8e-14 82.0 189 39.2
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 9.9e-14 81.3 188 42.0
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.7e-13 80.5 150 44.7
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 5.1e-10 68.9 173 39.3
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 5.1e-10 68.9 173 39.3
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 1.9e-09 67.0 74 50.0


User provided reference genes

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