Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 1.7e-63 245.7 118 100.0
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 5.2e-60 234.2 118 94.1
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 5.4e-33 144.4 103 66.0
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 7.8e-32 140.6 114 61.4
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 5.1e-31 137.9 107 58.9
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 1.5e-30 136.3 70 78.6
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 1.9e-30 136.0 106 58.5
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 2.5e-30 135.6 104 60.6
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 4.7e-29 131.3 114 50.0
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 2.4e-28 129.0 115 53.0
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 3.1e-28 128.6 115 52.2
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 3.1e-28 128.6 114 58.8
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 3.1e-28 128.6 104 65.4
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 8.9e-28 127.1 116 55.2
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 1.5e-27 126.3 115 51.3
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 2.6e-27 125.6 111 52.3
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 3.4e-27 125.2 102 56.9
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 4.4e-27 124.8 116 55.2
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 1.3e-26 123.2 118 54.2
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.3e-26 123.2 114 56.1
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 1.7e-26 122.9 102 56.9
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 1.7e-26 122.9 115 52.2
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 2.9e-26 122.1 105 55.2
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 4.9e-26 121.3 114 57.9
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 4.9e-26 121.3 108 56.5
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 8.4e-26 120.6 113 54.9
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 1.4e-25 119.8 74 66.2
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 3.2e-25 118.6 116 52.6
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 2.1e-24 115.9 115 48.7
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 2.7e-24 115.5 123 46.3
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 4.6e-24 114.8 116 50.9
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 6.0e-24 114.4 69 66.7
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 6.0e-24 114.4 115 49.6
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 7.8e-24 114.0 114 50.9
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 3.0e-23 112.1 115 48.7
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 6.6e-23 110.9 117 50.4
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 6.6e-23 110.9 111 44.1
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.5e-22 109.8 103 49.5
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 3.3e-22 108.6 69 65.2
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 5.6e-22 107.8 113 45.1
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 5.6e-22 107.8 109 43.1
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 5.6e-22 107.8 109 43.1
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 9.6e-22 107.1 105 50.5
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 1.6e-21 106.3 67 64.2
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 2.8e-21 105.5 106 49.1
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 3.6e-21 105.1 115 47.8
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 6.2e-21 104.4 75 58.7
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.1e-20 103.6 97 49.5
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 2.4e-20 102.4 70 62.9
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 5.3e-20 101.3 120 46.7
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 5.3e-20 101.3 106 48.1
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 9.0e-20 100.5 111 44.1
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 1.5e-19 99.8 99 49.5
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 2.6e-19 99.0 102 49.0
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 5.8e-19 97.8 111 45.9
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 7.6e-19 97.4 107 49.5
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 7.6e-19 97.4 111 45.9
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 7.6e-19 97.4 107 49.5
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 7.6e-19 97.4 107 49.5
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 7.6e-19 97.4 111 45.9
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 7.6e-19 97.4 111 45.9
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 7.6e-19 97.4 111 45.9
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 7.6e-19 97.4 111 45.9
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 9.9e-19 97.1 102 48.0
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 1.7e-18 96.3 102 47.1
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 4.9e-18 94.7 105 46.7
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 4.9e-18 94.7 102 47.1
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 6.4e-18 94.4 114 42.1
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 4.6e-16 88.2 68 51.5
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 7.9e-16 87.4 102 46.1
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 7.9e-16 87.4 65 52.3
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 1.0e-15 87.0 97 46.4
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 6.7e-15 84.3 101 42.6
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 6.7e-15 84.3 101 42.6
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 1.9e-14 82.8 110 42.7
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 9.6e-14 80.5 54 57.4
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 1.6e-13 79.7 68 48.5
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 2.1e-13 79.3 103 43.7
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 1.4e-12 76.6 113 36.3
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 1.8e-12 76.3 93 40.9
BcaB02g06429 Brassica carinata HOM05D007926 ORTHO05D009983 6.7e-07 57.8 80 40.0


User provided reference genes

Program Settings