Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 2.3e-159 565.5 280 100.0
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 3.8e-93 345.5 185 91.4
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 1.1e-87 327.4 282 62.4
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 1.7e-85 320.1 283 59.4
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 4.2e-84 315.5 282 59.2
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 2.7e-83 312.8 283 60.4
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 4.7e-83 312.0 222 68.5
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 5.1e-82 308.5 232 67.7
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 2.6e-81 306.2 228 65.8
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 5.7e-81 305.1 275 61.5
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 4.8e-80 302.0 277 57.8
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 1.8e-79 300.1 214 67.3
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 3.1e-79 299.3 198 73.2
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 1.2e-78 297.4 258 58.1
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 7.7e-78 294.7 283 55.8
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 3.8e-77 292.4 249 59.4
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 3.8e-77 292.4 228 64.9
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 1.1e-76 290.8 291 57.0
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 1.1e-76 290.8 195 70.8
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.5e-76 290.4 218 67.9
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 2.5e-76 289.7 220 63.6
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 3.2e-76 289.3 200 68.5
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 5.5e-76 288.5 247 60.7
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 7.2e-76 288.1 255 59.2
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.2e-75 287.3 283 55.8
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 1.2e-75 287.3 203 69.0
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 2.7e-75 286.2 253 57.7
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 2.7e-75 286.2 253 59.3
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 2.7e-75 286.2 283 55.8
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 8.0e-75 284.6 239 59.4
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 1.8e-74 283.5 206 67.0
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 2.3e-74 283.1 198 68.7
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 2.3e-74 283.1 267 53.6
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 3.0e-74 282.7 270 57.0
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 3.9e-74 282.3 201 69.2
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 5.2e-74 282.0 218 62.8
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 5.2e-74 282.0 250 56.4
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 6.7e-74 281.6 235 60.0
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 8.8e-74 281.2 226 64.6
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 8.8e-74 281.2 242 59.9
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 8.8e-74 281.2 226 62.8
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.1e-73 280.8 195 67.2
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 2.0e-73 280.0 195 67.7
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 2.0e-73 280.0 195 69.2
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 3.3e-73 279.3 242 59.5
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 4.4e-73 278.9 283 54.8
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 7.4e-73 278.1 258 55.4
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 1.7e-72 276.9 282 52.8
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 2.2e-72 276.6 225 58.2
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 2.8e-72 276.2 288 50.7
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 2.8e-72 276.2 169 76.3
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 3.7e-72 275.8 204 65.7
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 3.7e-72 275.8 196 66.3
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 3.7e-72 275.8 194 68.0
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 4.8e-72 275.4 197 69.0
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 6.3e-72 275.0 198 67.2
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 6.3e-72 275.0 197 70.6
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.1e-71 274.2 263 56.3
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 1.8e-71 273.5 162 77.8
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 2.4e-71 273.1 252 57.5
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 3.1e-71 272.7 197 67.0
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 3.1e-71 272.7 197 70.1
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 3.1e-71 272.7 253 55.3
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 7.0e-71 271.6 206 67.5
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 9.1e-71 271.2 198 65.7
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 1.2e-70 270.8 193 66.8
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.6e-70 270.4 194 67.5
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 4.5e-70 268.9 195 64.1
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 1.7e-69 266.9 228 58.8
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 3.8e-69 265.8 208 64.4
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 5.0e-69 265.4 229 58.1
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 5.0e-69 265.4 192 65.6
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 5.0e-69 265.4 174 72.4
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 5.0e-69 265.4 197 63.5
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 6.5e-69 265.0 194 67.5
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 2.5e-68 263.1 190 66.8
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 3.2e-68 262.7 190 64.2
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 4.2e-68 262.3 193 65.8
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.2e-68 262.3 313 48.2
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 5.5e-68 261.9 196 64.8
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 7.2e-68 261.5 206 60.7
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 3.6e-67 259.2 192 64.6
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 4.0e-66 255.8 191 62.3
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 4.0e-66 255.8 204 61.3
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 8.8e-66 254.6 162 71.0
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.0e-65 253.4 290 52.4
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 2.6e-65 253.1 211 60.7
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 4.4e-65 252.3 174 67.8
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.3e-64 250.8 163 70.6
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 2.2e-64 250.0 244 52.0
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 4.8e-64 248.8 286 49.0
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.2e-62 244.2 193 63.7
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 3.8e-61 239.2 216 56.0
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 6.5e-61 238.4 203 55.7
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 6.5e-61 238.4 330 42.7
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 5.5e-60 235.3 195 61.5
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 5.0e-53 212.2 187 57.8
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 5.5e-52 208.8 118 81.4
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 4.6e-46 189.1 189 45.0
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 3.3e-44 183.0 193 44.0
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 1.2e-41 174.5 132 66.7
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 7.5e-41 171.8 165 49.1
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 1.2e-35 154.5 135 60.0
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 4.0e-34 149.4 172 39.0
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 2.2e-32 143.7 168 42.3
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.1e-26 124.8 106 59.4
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.1e-23 114.8 86 66.3
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 1.6e-22 110.9 65 73.8
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 2.5e-20 103.6 241 27.4
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 9.6e-20 101.7 174 35.1
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 2.8e-19 100.1 163 34.4
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-18 95.9 114 45.6
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 8.1e-11 72.0 105 38.1
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 4.9e-08 62.8 51 52.9
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 3.2e-07 60.1 38 68.4
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 7.1e-07 58.9 32 78.1


User provided reference genes

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