Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 4.3e-101 371.3 188 100.0
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 2.0e-93 345.9 188 94.7
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 2.3e-86 322.4 188 87.2
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 5.3e-75 284.6 188 75.5
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 1.2e-74 283.5 190 78.4
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 1.0e-73 280.4 187 76.5
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 2.2e-73 279.3 188 75.0
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.1e-72 276.9 183 74.3
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 3.2e-72 275.4 186 75.3
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 9.4e-72 273.9 181 77.9
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 1.6e-71 273.1 185 76.8
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 3.6e-71 271.9 185 73.5
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 4.7e-71 271.6 178 75.3
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 8.0e-71 270.8 185 73.0
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.4e-70 270.0 189 74.1
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 5.2e-70 268.1 187 72.2
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 6.8e-70 267.7 182 75.8
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 8.8e-70 267.3 180 76.1
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 5.7e-69 264.6 182 72.5
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 5.7e-69 264.6 187 72.7
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 7.5e-69 264.2 176 74.4
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 2.2e-68 262.7 182 73.1
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 2.8e-68 262.3 181 74.6
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.8e-68 262.3 179 73.2
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 3.7e-68 261.9 188 72.9
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 3.7e-68 261.9 190 73.2
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 3.7e-68 261.9 186 72.6
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 6.3e-68 261.2 175 71.4
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 8.3e-68 260.8 179 74.3
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 8.3e-68 260.8 181 72.4
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 1.1e-67 260.4 183 73.8
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.1e-67 260.4 179 73.2
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 2.4e-67 259.2 188 71.3
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 2.4e-67 259.2 183 74.3
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.1e-67 258.8 179 72.1
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 4.1e-67 258.5 183 72.1
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 5.4e-67 258.1 179 71.5
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 7.0e-67 257.7 185 71.9
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.7e-66 255.8 180 72.8
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 3.5e-66 255.4 178 74.2
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 4.5e-66 255.0 180 69.4
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 5.9e-66 254.6 176 72.7
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 5.9e-66 254.6 180 72.2
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 5.9e-66 254.6 182 73.1
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 7.7e-66 254.2 181 71.3
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 1.7e-65 253.1 188 67.0
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 2.3e-65 252.7 169 75.1
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 8.6e-65 250.8 173 70.5
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 8.6e-65 250.8 186 66.1
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 1.5e-64 250.0 190 69.5
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 1.9e-64 249.6 185 67.6
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 1.9e-64 249.6 182 72.0
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 1.9e-64 249.6 184 70.1
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 4.2e-64 248.4 182 71.4
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 1.2e-63 246.9 175 69.7
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 2.1e-63 246.1 167 70.7
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 1.4e-62 243.4 163 74.2
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 6.8e-62 241.1 186 69.4
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 1.2e-61 240.4 174 67.8
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 3.4e-61 238.8 186 65.6
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 5.7e-61 238.0 159 73.6
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 2.2e-60 236.1 179 68.7
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 3.7e-60 235.3 172 68.0
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 3.7e-60 235.3 175 68.6
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 4.1e-59 231.9 182 64.8
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 5.4e-59 231.5 182 67.0
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 5.4e-59 231.5 163 69.3
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 7.0e-59 231.1 179 67.0
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 7.0e-59 231.1 179 67.0
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 1.6e-58 229.9 182 65.9
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 1.6e-58 229.9 182 65.9
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 2.0e-58 229.6 182 65.9
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 2.7e-58 229.2 175 72.0
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 2.7e-58 229.2 190 62.1
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 3.5e-58 228.8 175 71.4
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 1.0e-57 227.3 179 65.4
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 1.0e-57 227.3 173 64.7
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 2.3e-57 226.1 179 65.4
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 2.3e-57 226.1 145 79.3
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 2.3e-57 226.1 189 61.9
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 2.9e-57 225.7 170 64.7
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 5.0e-57 224.9 181 64.1
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 1.9e-56 223.0 154 74.0
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 2.5e-56 222.6 247 49.8
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 4.3e-56 221.9 136 80.1
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 4.0e-54 215.3 167 64.7
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 1.5e-53 213.4 136 77.2
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.3e-52 210.3 174 61.5
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 1.7e-52 209.9 136 77.2
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 1.7e-52 209.9 144 72.2
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 5.4e-51 204.9 141 73.8
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 5.4e-51 204.9 175 61.1
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 6.4e-44 181.4 198 53.5
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 2.4e-43 179.5 181 49.7
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 8.6e-41 171.0 171 55.0
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 7.3e-40 167.9 122 66.4
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 4.7e-39 165.2 178 54.5
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 4.4e-37 158.7 151 53.0
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 6.4e-36 154.8 101 77.2
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 4.1e-35 152.1 197 46.7
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 1.1e-30 137.5 81 77.8
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 5.8e-29 131.7 155 47.1
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.4e-27 127.1 74 86.5
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 2.4e-27 126.3 131 55.0
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.6e-26 123.6 87 73.6
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.7e-25 120.2 173 45.1
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 4.0e-22 109.0 170 37.1
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 1.3e-20 104.0 91 59.3
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 4.6e-18 95.5 138 39.9
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 5.3e-14 82.0 64 57.8
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 5.1e-09 65.5 40 72.5
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.5e-08 63.2 65 52.3
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 1.3e-07 60.8 39 74.4


User provided reference genes

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