Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 7.1e-180 634.0 372 100.0
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 3.2e-63 246.5 186 73.7
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 6.0e-46 189.1 186 57.5
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 1.3e-45 188.0 186 56.5
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 1.8e-45 187.6 186 57.0
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 4.3e-44 183.0 171 57.9
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 4.3e-44 183.0 186 54.8
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 9.7e-44 181.8 187 54.0
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 1.3e-43 181.4 187 55.1
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.6e-43 181.0 187 54.0
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 2.8e-43 180.3 187 53.5
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 6.3e-43 179.1 187 53.5
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 6.3e-43 179.1 186 54.3
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 1.1e-42 178.3 186 52.2
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 1.8e-42 177.6 189 52.4
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 5.3e-42 176.0 186 51.6
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 9.0e-42 175.3 186 52.2
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.5e-41 174.5 186 52.7
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 1.5e-41 174.5 186 51.6
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 2.6e-41 173.7 191 51.8
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 3.4e-41 173.3 186 51.6
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 7.6e-41 172.2 187 54.0
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 7.6e-41 172.2 186 51.6
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 7.6e-41 172.2 186 52.2
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 2.2e-40 170.6 187 52.9
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 2.9e-40 170.2 186 51.1
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 3.8e-40 169.9 187 53.5
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 1.1e-39 168.3 191 50.3
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 1.4e-39 167.9 186 51.1
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 1.9e-39 167.5 186 49.5
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 7.2e-39 165.6 180 53.3
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 1.6e-38 164.5 187 51.9
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 1.6e-38 164.5 186 51.1
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 2.1e-38 164.1 192 48.4
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 3.6e-38 163.3 188 48.9
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 4.6e-38 162.9 193 50.8
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 6.1e-38 162.5 240 42.5
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 1.8e-37 161.0 187 49.7
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 1.8e-37 161.0 187 49.7
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 1.8e-37 161.0 187 49.2
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 2.3e-37 160.6 200 48.5
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 1.9e-36 157.5 186 48.4
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 2.5e-36 157.1 187 50.3
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 4.3e-36 156.4 187 50.8
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 7.4e-36 155.6 192 46.9
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 7.4e-36 155.6 194 49.0
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 1.3e-35 154.8 187 48.1
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 1.3e-35 154.8 187 49.2
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 1.3e-35 154.8 187 49.2
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 2.8e-35 153.7 189 47.6
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 8.2e-35 152.1 169 53.3
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 8.2e-35 152.1 187 48.1
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 2.4e-34 150.6 187 48.1
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 4.1e-34 149.8 186 46.8
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 9.1e-34 148.7 102 73.5
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 2.6e-33 147.1 184 47.3
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 3.4e-33 146.7 186 46.2
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 5.9e-33 146.0 186 46.8
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 1.0e-32 145.2 186 44.1
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 1.3e-32 144.8 186 45.7
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 1.3e-32 144.8 225 40.4
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 1.3e-32 144.8 186 46.2
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 1.3e-32 144.8 186 45.2
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 1.7e-32 144.4 186 47.3
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 2.2e-32 144.1 186 45.2
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 3.8e-32 143.3 186 45.2
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 6.5e-32 142.5 189 46.0
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 1.1e-31 141.7 189 46.0
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 1.4e-31 141.4 164 50.0
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 1.4e-31 141.4 187 43.9
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 1.9e-31 141.0 187 44.9
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 4.2e-31 139.8 200 41.0
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 5.5e-31 139.4 175 49.7
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 5.5e-31 139.4 189 45.0
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 5.5e-31 139.4 186 44.1
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 2.7e-30 137.1 186 41.9
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 7.9e-30 135.6 186 41.9
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 7.9e-30 135.6 188 43.1
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 7.9e-30 135.6 103 66.0
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 1.0e-29 135.2 186 40.9
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 1.0e-29 135.2 187 43.3
Nitab4.5_0000383g0410 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.8e-29 134.4 109 65.1
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 5.1e-29 132.9 186 41.4
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 6.7e-29 132.5 189 42.9
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 1.1e-28 131.7 186 42.5
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 1.5e-28 131.3 186 41.4
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 1.5e-28 131.3 189 43.4
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 2.0e-28 131.0 186 40.9
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 3.3e-28 130.2 249 37.3
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 3.3e-28 130.2 186 40.9
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 4.4e-28 129.8 103 63.1
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 5.7e-28 129.4 186 43.5
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 1.7e-27 127.9 186 41.4
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 1.7e-27 127.9 137 56.2
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 3.7e-27 126.7 168 44.0
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.1e-26 125.2 108 62.0
Nitab4.5_0010095g0020 Nicotiana tabacum HOM05D006640 ORTHO05D008078 3.1e-26 123.6 92 69.6
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 6.9e-26 122.5 102 59.8
Duzib205G1379 Durio zibethinus HOM05D006640 ORTHO05D008078 1.5e-25 121.3 113 56.6
Peaxi162Scf00139g00094 Petunia axillaris HOM05D006640 ORTHO05D008078 3.6e-22 110.2 124 50.8
SHI14582 Sapria himalayana HOM05D006640 ORTHO05D008078 4.7e-22 109.8 164 41.5
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 1.0e-21 108.6 81 65.4
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 5.2e-21 106.3 192 35.4
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 1.1e-20 105.1 116 50.0
unitig_46.g18025 Utricularia gibba HOM05D006640 ORTHO05D008078 1.5e-20 104.8 218 33.0
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 1.5e-20 104.8 183 36.1
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 3.3e-20 103.6 186 36.0
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 9.7e-20 102.1 186 36.6
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 1.7e-19 101.3 117 52.1
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 3.1e-18 97.1 183 32.2
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 7.0e-18 95.9 158 37.3
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 7.7e-17 92.4 95 49.5
CDE04G0756 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 1.0e-16 92.0 130 42.3
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.3e-16 91.7 123 45.5
Atru.chr3.42 Acer truncatum HOM05D006640 ORTHO05D008078 2.9e-16 90.5 66 63.6
Potri.002G007925 Populus trichocarpa HOM05D000132 ORTHO05D000058 2.1e-14 84.3 109 52.3
Potri.002G008175 Populus trichocarpa HOM05D000132 ORTHO05D000058 1.2e-12 78.6 103 50.5
Cfa015562 Carpinus fangiana HOM05D006640 ORTHO05D008078 2.6e-12 77.4 100 43.0
Potri.002G008375 Populus trichocarpa HOM05D000132 ORTHO05D000058 3.3e-12 77.0 109 49.5
Potri.002G008100 Populus trichocarpa HOM05D000132 ORTHO05D000058 9.7e-12 75.5 103 49.5
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis HOM05D006640 ORTHO05D008078 2.8e-11 73.9 101 41.6
Aqoxy2G03352 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 4.8e-11 73.2 130 37.7
vmacro03672 Vaccinium macrocarpon HOM05D002991 ORTHO05D003480 1.4e-10 71.6 47 74.5
FvH4_6g22960 Fragaria vesca HOM05D006640 ORTHO05D008078 1.0e-08 65.5 59 54.2
Actinidia35855 Actinidia chinensis HOM05D002342 ORTHO05D002407 1.5e-07 61.6 42 69.0


User provided reference genes

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