Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0196300 Salix brachista HOM05D006240 ORTHO05D007709 1.1e-133 479.9 248 100.0
Potri.005G253101 Populus trichocarpa HOM05D006240 ORTHO05D007709 4.5e-106 388.3 220 92.7
Manes.13G069200 Manihot esculenta HOM05D006240 ORTHO05D007709 5.4e-59 231.9 214 60.7
QL02p015120 Quercus lobata HOM05D006240 ORTHO05D007709 7.3e-56 221.5 220 58.2
Dinv31964 Davidia involucrata HOM05D006240 ORTHO05D007709 1.2e-53 214.2 218 58.7
CiPaw.08G075400 Carya illinoinensis HOM05D006240 ORTHO05D007709 3.4e-53 212.6 211 61.1
THA.LOC104811476 Tarenaya hassleriana HOM05D006240 ORTHO05D007709 4.9e-52 208.8 197 59.4
GSVIVG01013393001 Vitis vinifera HOM05D006240 ORTHO05D007709 8.4e-52 208.0 223 53.8
TAR376G0245 Trochodendron aralioides HOM05D006240 ORTHO05D007709 1.1e-51 207.6 218 55.5
TAR628G0625 Trochodendron aralioides HOM05D006240 ORTHO05D007709 1.4e-51 207.2 222 56.3
vmacro21788 Vaccinium macrocarpon HOM05D006240 ORTHO05D007709 2.7e-50 203.0 216 54.6
Actinidia17059 Actinidia chinensis HOM05D006240 ORTHO05D007709 4.6e-50 202.2 210 54.3
Gorai.002G114700 Gossypium raimondii HOM05D006240 ORTHO05D007709 6.0e-50 201.8 202 56.4
Actinidia15507 Actinidia chinensis HOM05D006240 ORTHO05D007709 7.8e-50 201.4 195 56.9
COL.COLO4_07215 Corchorus olitorius HOM05D006240 ORTHO05D007709 7.8e-50 201.4 186 64.0
CANSAT56G3734 Cannabis sativa HOM05D006240 ORTHO05D007709 1.0e-49 201.1 196 60.7
CSS0005151 Camellia sinensis var. sinensis HOM05D006240 ORTHO05D007709 1.3e-49 200.7 194 57.2
Ciclev10002499m.g Citrus clementina HOM05D006240 ORTHO05D007709 3.9e-49 199.1 214 57.0
Gohir.D01G089000 Gossypium hirsutum HOM05D006240 ORTHO05D007709 3.9e-49 199.1 202 55.9
Thecc.08G062400 Theobroma cacao HOM05D006240 ORTHO05D007709 3.9e-49 199.1 195 61.0
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla HOM05D006240 ORTHO05D007709 1.1e-48 197.6 226 53.1
TWI36G0187 Tripterygium wilfordii HOM05D006240 ORTHO05D007709 7.3e-48 194.9 221 52.0
Rhsim06G0005200 Rhododendron simsii HOM05D006240 ORTHO05D007709 9.6e-48 194.5 215 52.6
MBI05_g33294_MAGBIO Magnolia biondii HOM05D006240 ORTHO05D007709 1.6e-47 193.7 197 55.8
Duzib041G0618 Durio zibethinus HOM05D006240 ORTHO05D007709 8.1e-47 191.4 207 57.0
Haze_22830 Corylus avellana HOM05D006240 ORTHO05D007709 4.5e-45 185.7 167 62.3
Sed0018366 Sechium edule HOM05D006240 ORTHO05D007709 1.3e-44 184.1 192 56.2
CsaV3_4G037430 Cucumis sativus L. HOM05D006240 ORTHO05D007709 1.7e-44 183.7 188 56.9
MSTRG.24503 Avicennia marina HOM05D006240 ORTHO05D007709 4.9e-44 182.2 209 50.7
BcaC06g34834 Brassica carinata HOM05D006240 ORTHO05D007709 4.9e-44 182.2 190 55.3
C07p22820 Brassica napus HOM05D006240 ORTHO05D007709 4.9e-44 182.2 190 55.3
MELO3C017040.2 Cucumis melo HOM05D006240 ORTHO05D007709 4.9e-44 182.2 191 55.5
PSO210G3458 Papaver somniferum HOM05D006240 ORTHO05D007709 4.9e-44 182.2 199 50.3
C08p20350 Brassica napus HOM05D006240 ORTHO05D007709 6.4e-44 181.8 207 51.2
BcaB03g12855 Brassica carinata HOM05D006240 ORTHO05D007709 8.4e-44 181.4 211 52.1
AL1G33760 Arabidopsis lyrata HOM05D006240 ORTHO05D007709 1.9e-43 180.3 197 53.8
CARHR021210 Cardamine hirsuta HOM05D006240 ORTHO05D007709 2.4e-43 179.9 199 53.3
Carub.0001s2022 Capsella rubella HOM05D006240 ORTHO05D007709 3.2e-43 179.5 209 50.7
Cfa014112 Carpinus fangiana HOM05D006240 ORTHO05D007709 4.2e-43 179.1 166 61.4
Sp1g18470 Schrenkiella parvula HOM05D006240 ORTHO05D007709 5.4e-43 178.7 214 50.9
AT1G20770 Arabidopsis thaliana HOM05D006240 ORTHO05D007709 1.6e-42 177.2 199 51.8
BolC7t42820H Brassica oleracea HOM05D006240 ORTHO05D007709 1.6e-42 177.2 192 54.7
BraA07t29290Z Brassica rapa HOM05D006240 ORTHO05D007709 2.7e-42 176.4 212 51.4
BcaB03g14301 Brassica carinata HOM05D006240 ORTHO05D007709 3.5e-42 176.0 191 55.5
BcaC07g39051 Brassica carinata HOM05D006240 ORTHO05D007709 6.0e-42 175.3 208 51.9
BolC8t49663H Brassica oleracea HOM05D006240 ORTHO05D007709 6.0e-42 175.3 213 51.2
A07p15490 Brassica napus HOM05D006240 ORTHO05D007709 1.3e-41 174.1 213 51.2
unitig_578.g16237 Utricularia gibba HOM05D006240 ORTHO05D007709 1.3e-41 174.1 191 50.3
Cc04_g09300 Coffea canephora HOM05D006240 ORTHO05D007709 1.8e-41 173.7 217 47.9
Thhalv10008759m.g Eutrema salsugineum HOM05D006240 ORTHO05D007709 5.1e-41 172.2 209 51.2
A08p29270 Brassica napus HOM05D006240 ORTHO05D007709 6.7e-41 171.8 201 51.2
Lj4C7G6 Lonicera japonica HOM05D006240 ORTHO05D007709 1.1e-40 171.0 230 48.7
Ah.00g001020 Amaranthus hybridus HOM05D006240 ORTHO05D007709 1.5e-40 170.6 197 51.3
EL10Ac4g09545 Beta vulgaris HOM05D006240 ORTHO05D007709 1.5e-40 170.6 191 52.9
CDE04G0018 Ceratophyllum demersum HOM05D006240 ORTHO05D007709 2.5e-40 169.9 197 51.3
AUR62035138 Chenopodium quinoa HOM05D006240 ORTHO05D007709 2.5e-40 169.9 195 50.8
Peaxi162Scf00129g00239 Petunia axillaris HOM05D006240 ORTHO05D007709 2.5e-40 169.9 190 51.6
Nitab4.5_0006318g0100 Nicotiana tabacum HOM05D006240 ORTHO05D007709 3.3e-40 169.5 189 52.4
PGSC0003DMG400001324 Solanum tuberosum HOM05D006240 ORTHO05D007709 3.3e-40 169.5 204 49.0
BraA08t34862Z Brassica rapa HOM05D006240 ORTHO05D007709 4.3e-40 169.1 199 51.3
PGR031G1135 Punica granatum HOM05D006240 ORTHO05D007709 7.4e-40 168.3 198 49.5
Nitab4.5_0000564g0070 Nicotiana tabacum HOM05D006240 ORTHO05D007709 9.6e-40 167.9 189 51.9
PSO170G2591 Papaver somniferum HOM05D006240 ORTHO05D007709 1.6e-39 167.2 194 48.5
SGA_v2.0_scaffold54G19646 Striga asiatica HOM05D006240 ORTHO05D007709 1.6e-39 167.2 193 50.8
Aqoxy5G00997 Aquilegia oxysepala HOM05D006240 ORTHO05D007709 3.7e-39 166.0 199 50.3
CAN.G206.149 Capsicum annuum HOM05D006240 ORTHO05D007709 6.2e-39 165.2 203 49.3
Nn4g24539 Nelumbo nucifera HOM05D006240 ORTHO05D007709 6.2e-39 165.2 225 48.0
Nn5g31000 Nelumbo nucifera HOM05D006240 ORTHO05D007709 8.1e-39 164.9 197 51.8
Sopen02g032680 Solanum pennellii HOM05D006240 ORTHO05D007709 1.4e-38 164.1 197 48.2
AUR62042908 Chenopodium quinoa HOM05D006240 ORTHO05D007709 1.8e-38 163.7 195 49.7
Eucgr.K03289 Eucalyptus grandis HOM05D006240 ORTHO05D007709 1.8e-38 163.7 254 43.3
Gohir.A01G103700 Gossypium hirsutum HOM05D006240 ORTHO05D007709 1.8e-38 163.7 169 55.0
MD07G1117600 Malus domestica HOM05D006240 ORTHO05D007709 2.4e-38 163.3 194 52.6
Migut.M00585 Erythranthe guttata HOM05D006240 ORTHO05D007709 9.0e-38 161.4 190 48.4
Os04g0509200 Oryza sativa ssp. japonica HOM05D006240 ORTHO05D007709 9.0e-38 161.4 197 49.2
HPP92_012646 Vanilla planifolia HOM05D006240 ORTHO05D007709 9.0e-38 161.4 195 49.7
Aa31LG7G4930 Aethionema arabicum HOM05D006240 ORTHO05D007709 1.2e-37 161.0 198 51.0
Atru.chr9.2231 Acer truncatum HOM05D006240 ORTHO05D007709 2.6e-37 159.8 208 49.0
RcHm_v2.0_Chr1g0349471 Rosa chinensis HOM05D006240 ORTHO05D007709 2.6e-37 159.8 193 51.8
FvH4_7g11300 Fragaria vesca HOM05D006240 ORTHO05D007709 3.4e-37 159.5 196 52.0
FAN10G2738 Fragaria x ananassa HOM05D006240 ORTHO05D007709 3.4e-37 159.5 197 52.3
DCAR_020858 Daucus carota HOM05D001217 ORTHO05D007709 4.5e-37 159.1 222 45.0
FAN06G3720 Fragaria x ananassa HOM05D006240 ORTHO05D007709 7.6e-37 158.3 193 52.8
FAN03G2060 Fragaria x ananassa HOM05D006240 ORTHO05D007709 9.9e-37 157.9 197 51.8
FAN01G0923 Fragaria x ananassa HOM05D006240 ORTHO05D007709 3.8e-36 156.0 222 49.1
HanXRQChr16g0516421 Helianthus annuus HOM05D006240 ORTHO05D007709 6.4e-36 155.2 216 47.2
ECA232G5059 Erigeron canadensis HOM05D006240 ORTHO05D007709 1.1e-35 154.5 210 44.3
RcHm_v2.0_Chr7g0215611 Rosa chinensis HOM05D006240 ORTHO05D007709 1.1e-35 154.5 193 50.8
SalBow6G2548 Salvia bowleyana HOM05D006240 ORTHO05D007709 1.1e-35 154.5 196 47.4
ClCG11G018840 Citrullus lanatus HOM05D006240 ORTHO05D007709 1.4e-35 154.1 264 42.4
Ca_15403_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 3.2e-35 152.9 216 47.7
Ca_29886_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 3.2e-35 152.9 216 47.7
Migut.N02969 Erythranthe guttata HOM05D006240 ORTHO05D007709 4.2e-35 152.5 193 46.6
TPR.G38126 Trifolium pratense HOM05D006240 ORTHO05D007709 7.1e-35 151.8 205 47.8
Glyma.19G151500 Glycine max HOM05D006240 ORTHO05D007709 1.6e-34 150.6 188 49.5
Psat5g009800 Pisum sativum HOM05D006240 ORTHO05D007709 1.6e-34 150.6 215 47.4
Sc15g0004230 Simmondsia chinensis HOM05D006240 ORTHO05D007709 1.6e-34 150.6 172 50.0
Migut.M00223 Erythranthe guttata HOM05D006240 ORTHO05D007709 2.1e-34 150.2 209 44.0
MD02G1098700 Malus domestica HOM05D006240 ORTHO05D007709 2.7e-34 149.8 191 50.3
Lalb_Chr11g0061501 Lupinus albus HOM05D006240 ORTHO05D007709 3.0e-33 146.4 219 45.2
Medtr3g115650 Medicago truncatula HOM05D006240 ORTHO05D007709 3.0e-33 146.4 231 44.2
Lj1g0026125 Lotus japonicus HOM05D006240 ORTHO05D007709 5.1e-33 145.6 215 46.5
Glyma.03G148200 Glycine max HOM05D006240 ORTHO05D007709 6.7e-33 145.2 227 42.7
Phvul.001G146200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 8.7e-33 144.8 197 48.7
VMungo1383G1920 Vigna mungo HOM05D006240 ORTHO05D007709 1.1e-32 144.4 188 50.0
Lsat_1_v5_gn_2_1920 Lactuca sativa HOM05D006240 ORTHO05D007709 1.5e-32 144.1 176 50.0
Hund05091 Selenicereus undatus HOM05D006240 ORTHO05D007709 4.3e-32 142.5 198 48.5
Prupe.2G140800 Prunus persica HOM05D006240 ORTHO05D007709 1.1e-30 137.9 194 45.9
arahy.Tifrunner.gnm1.ann1.MR2FC0 Arachis hypogaea HOM05D006240 ORTHO05D007709 2.7e-26 123.2 222 41.9
Zm00001eb077760 Zea mays HOM05D006240 ORTHO05D007709 4.8e-23 112.5 166 42.8
Atru.chr3.2559 Acer truncatum HOM05D006240 ORTHO05D007709 3.1e-22 109.8 211 37.9
Solyc02g087940.4 Solanum lycopersicum HOM05D006240 ORTHO05D007709 2.6e-21 106.7 129 48.8
SGA_v2.0_scaffold54G19644 Striga asiatica HOM05D006240 ORTHO05D007709 6.1e-18 95.5 302 29.8
Atru.chr9.2243 Acer truncatum HOM05D006240 ORTHO05D007709 6.7e-17 92.0 76 64.5
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea HOM05D006240 ORTHO05D007709 4.3e-16 89.4 185 38.4
ATR0807G014 Amborella trichopoda HOM05D006240 ORTHO05D007709 1.1e-14 84.7 106 49.1
Phvul.009G075200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 1.8e-14 84.0 78 57.7
FAN10G3076 Fragaria x ananassa HOM05D006240 ORTHO05D007709 6.9e-14 82.0 114 45.6
Pp3c17_23460 Physcomitrium patens HOM05D006240 ORTHO05D007709 1.7e-12 77.4 206 32.5
SEGI_13318 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 2.7e-10 70.1 60 56.7
Mapoly0189s0009 Marchantia polymorpha HOM05D006240 ORTHO05D007709 7.9e-10 68.6 209 29.7
SEGI_19917 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 3.3e-08 63.2 138 37.0
Atru.chr9.2228 Acer truncatum HOM05D000343 ORTHO05D000975 4.1e-06 56.2 46 63.0


User provided reference genes

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