Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0191700 Salix brachista HOM05D008201 ORTHO05D005639 2.8e-66 255.4 154 100.0
Potri.005G248100 Populus trichocarpa HOM05D008201 ORTHO05D005639 5.1e-31 138.3 175 56.0
Lj4A14T47 Lonicera japonica HOM05D008201 ORTHO05D005639 1.9e-17 93.2 141 58.2
CiPaw.08G071500 Carya illinoinensis HOM05D008201 ORTHO05D005639 4.6e-16 88.6 192 39.6
Psat5g004800 Pisum sativum HOM05D015205 ORTHO05D005639 1.9e-14 83.2 161 47.2
TAR376G0148 Trochodendron aralioides HOM05D008201 ORTHO05D005639 7.3e-14 81.3 177 40.1
Ca_15345_v3 Cicer arietinum L. HOM05D015205 ORTHO05D005639 9.6e-14 80.9 145 47.6
Ca_30250_v3 Cicer arietinum L. HOM05D015205 ORTHO05D005639 9.6e-14 80.9 145 47.6
Prupe.1G356400 Prunus persica HOM05D008201 ORTHO05D005639 9.6e-14 80.9 176 42.6
TWI36G0214 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 1.6e-13 80.1 167 44.9
Medtr3g117290 Medicago truncatula HOM05D015205 ORTHO05D005639 2.1e-13 79.7 157 45.9
TPR.G32200 Trifolium pratense HOM05D015205 ORTHO05D005639 8.1e-13 77.8 166 44.0
TWI56G0959 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 8.1e-13 77.8 158 45.6
arahy.Tifrunner.gnm1.ann1.QP4M0U Arachis hypogaea HOM05D008201 ORTHO05D005639 1.8e-12 76.6 185 40.0
Gohir.A01G107800 Gossypium hirsutum HOM05D008201 ORTHO05D005639 4.0e-12 75.5 162 41.4
arahy.Tifrunner.gnm1.ann1.DA1J6X Arachis hypogaea HOM05D008201 ORTHO05D005639 5.3e-12 75.1 176 40.3
Manes.05G140400 Manihot esculenta HOM05D008201 ORTHO05D005639 6.9e-12 74.7 134 43.3
Potri.002G013200 Populus trichocarpa HOM05D050492 ORTHO05D332343 6.9e-12 74.7 138 42.0
Gohir.D01G094300 Gossypium hirsutum HOM05D008201 ORTHO05D005639 9.0e-12 74.3 158 41.8
MD08G1004500 Malus domestica HOM05D008201 ORTHO05D005639 1.2e-11 73.9 209 36.4
THA.LOC104809672 Tarenaya hassleriana HOM05D008570 ORTHO05D005639 2.0e-11 73.2 129 45.7
Eucgr.F01726 Eucalyptus grandis HOM05D008201 ORTHO05D005639 3.4e-11 72.4 148 43.2
Carub.0002s2307 Capsella rubella HOM05D008570 ORTHO05D005639 5.8e-11 71.6 163 39.9
Dinv39575 Davidia involucrata HOM05D008201 ORTHO05D005639 5.8e-11 71.6 182 37.9
TWI12G0216 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 5.8e-11 71.6 152 44.7
Gorai.002G119600 Gossypium raimondii HOM05D008201 ORTHO05D005639 1.3e-10 70.5 156 41.7
vmacro04391 Vaccinium macrocarpon HOM05D008201 ORTHO05D005639 1.7e-10 70.1 183 39.9
CiPaw.07G140900 Carya illinoinensis HOM05D008201 ORTHO05D005639 2.9e-10 69.3 183 40.4
Gohir.A05G181000 Gossypium hirsutum HOM05D008201 ORTHO05D005639 3.8e-10 68.9 136 41.9
Gorai.009G189500 Gossypium raimondii HOM05D008201 ORTHO05D005639 3.8e-10 68.9 136 41.2
CARHR069730 Cardamine hirsuta HOM05D008570 ORTHO05D005639 1.4e-09 67.0 150 40.7
A07p28610 Brassica napus HOM05D008570 ORTHO05D005639 1.9e-09 66.6 151 39.7
Aqoxy6G01838 Aquilegia oxysepala HOM05D008201 ORTHO05D005639 3.2e-09 65.9 178 37.1
Dinv31918 Davidia involucrata HOM05D008201 ORTHO05D005639 3.2e-09 65.9 179 38.0
MD15G1003900 Malus domestica HOM05D008201 ORTHO05D005639 3.2e-09 65.9 221 35.7
CSS0003901 Camellia sinensis var. sinensis HOM05D008201 ORTHO05D005639 4.2e-09 65.5 185 38.4
BcaC08g47283 Brassica carinata HOM05D008570 ORTHO05D005639 5.5e-09 65.1 160 36.9
BolC6t40053H Brassica oleracea HOM05D008570 ORTHO05D005639 5.5e-09 65.1 160 36.9
BolC2t09364H Brassica oleracea HOM05D008570 ORTHO05D005639 1.6e-08 63.5 155 38.7
Ciclev10002349m.g Citrus clementina HOM05D008201 ORTHO05D005639 1.6e-08 63.5 140 44.3
TAR628G0948 Trochodendron aralioides HOM05D008201 ORTHO05D005639 1.6e-08 63.5 170 40.0
Lsat_1_v5_gn_8_27820 Lactuca sativa HOM05D008201 ORTHO05D005639 2.1e-08 63.2 145 37.2
Actinidia29780 Actinidia chinensis HOM05D008201 ORTHO05D005639 3.5e-08 62.4 116 44.0
Oeu016882.1 Olea europaea HOM05D008201 ORTHO05D005639 6.0e-08 61.6 181 36.5
Hma1.2p1_1100F.1_g257080 Hydrangea macrophylla HOM05D008201 ORTHO05D005639 7.9e-08 61.2 173 41.6
Thecc.08G055500 Theobroma cacao HOM05D008201 ORTHO05D005639 7.9e-08 61.2 124 49.2
COL.COLO4_17991 Corchorus olitorius HOM05D018564 ORTHO05D019060 1.0e-07 60.8 139 36.0
Lj1g0003360 Lotus japonicus HOM05D015205 ORTHO05D005639 1.3e-07 60.5 162 38.3
Duzib116G0781 Durio zibethinus HOM05D008201 ORTHO05D005639 1.8e-07 60.1 65 61.5
FAN20G0338 Fragaria x ananassa HOM05D008201 ORTHO05D005639 1.8e-07 60.1 61 63.9
Rhsim07G0253800 Rhododendron simsii HOM05D008201 ORTHO05D005639 2.3e-07 59.7 179 46.4
C02p33360 Brassica napus HOM05D008570 ORTHO05D005639 3.9e-07 58.9 155 38.1
Lalb_Chr19g0131701 Lupinus albus HOM05D008201 ORTHO05D005639 5.1e-07 58.5 171 38.0
COL.COLO4_21609 Corchorus olitorius HOM05D008201 ORTHO05D005639 6.7e-07 58.2 59 62.7
Duzib093G2238 Durio zibethinus HOM05D008201 ORTHO05D005639 8.7e-07 57.8 79 54.4
HanXRQChr08g0216051 Helianthus annuus HOM05D008201 ORTHO05D005639 8.7e-07 57.8 160 36.2
Lsat_1_v5_gn_8_28441 Lactuca sativa HOM05D008570 ORTHO05D005639 1.1e-06 57.4 121 40.5
FAN15G2778 Fragaria x ananassa HOM05D008201 ORTHO05D005639 1.5e-06 57.0 59 61.0
Atru.chr13.170 Acer truncatum HOM05D008201 ORTHO05D005639 1.9e-06 56.6 149 40.9
BolC7t42843H Brassica oleracea HOM05D008570 ORTHO05D005639 1.9e-06 56.6 155 34.2
FAN27G2977 Fragaria x ananassa HOM05D008201 ORTHO05D005639 1.9e-06 56.6 228 35.1
Actinidia17030 Actinidia chinensis HOM05D000356 ORTHO05D000265 3.3e-06 55.8 126 42.1
Duzib041G0568 Durio zibethinus HOM05D008201 ORTHO05D005639 3.3e-06 55.8 57 61.4
SalBow6G7161 Salvia bowleyana HOM05D014976 ORTHO05D005639 3.3e-06 55.8 139 38.8
BcaNung03383 Brassica carinata HOM05D008570 ORTHO05D005639 5.6e-06 55.1 151 34.4
C07p23020 Brassica napus HOM05D008570 ORTHO05D005639 5.6e-06 55.1 151 34.4
Carub.0001s1991 Capsella rubella HOM05D008570 ORTHO05D005639 7.4e-06 54.7 159 37.7
QL02p013717 Quercus lobata HOM05D008201 ORTHO05D005639 7.4e-06 54.7 60 60.0


User provided reference genes

Program Settings