Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 0.0e+00 1099.0 542 100.0
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 4.6e-297 1023.8 542 93.4
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 1.7e-211 739.6 542 66.4
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 2.4e-208 729.2 568 63.6
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 9.0e-208 727.2 542 65.9
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 1.2e-207 726.9 544 66.4
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 7.6e-207 724.2 542 65.9
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 1.7e-206 723.0 542 65.7
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 2.9e-206 722.2 542 65.3
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 2.7e-204 715.7 542 65.3
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 4.8e-201 704.9 542 64.6
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 9.0e-200 700.7 544 64.2
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 1.0e-198 697.2 542 63.5
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 1.1e-197 693.7 542 63.8
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.9e-197 693.0 542 63.8
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 1.9e-197 693.0 543 64.3
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 5.5e-197 691.4 542 63.8
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 4.6e-196 688.3 542 63.3
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 3.0e-195 685.6 542 60.9
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 3.3e-194 682.2 545 62.8
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 3.7e-193 678.7 543 60.6
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 5.3e-192 674.9 542 60.0
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 9.0e-192 674.1 542 60.7
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 1.2e-191 673.7 543 61.7
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 7.6e-191 671.0 542 62.5
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 1.3e-190 670.2 544 59.2
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 1.7e-190 669.8 544 58.8
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 1.4e-189 666.8 542 60.1
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.2e-189 665.6 542 59.6
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 9.3e-189 664.1 544 58.5
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 1.6e-188 663.3 542 61.1
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 2.7e-188 662.5 545 59.4
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 7.9e-188 661.0 545 59.1
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 2.3e-187 659.4 544 58.5
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 2.3e-187 659.4 544 58.5
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 5.1e-187 658.3 547 60.7
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 2.5e-186 656.0 544 58.5
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 4.3e-186 655.2 545 59.3
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 2.8e-185 652.5 543 59.1
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 1.4e-184 650.2 542 58.9
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 5.0e-182 641.7 544 61.2
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 8.5e-182 641.0 542 59.4
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 8.5e-182 641.0 543 58.9
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 1.1e-181 640.6 545 59.4
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 2.1e-180 636.3 574 55.2
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 1.5e-178 630.2 544 59.2
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 2.0e-178 629.8 542 58.1
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 1.7e-177 626.7 545 57.8
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 3.7e-177 625.5 542 58.9
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 6.3e-177 624.8 542 55.9
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 6.3e-177 624.8 542 57.9
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 8.2e-177 624.4 472 65.3
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 8.2e-177 624.4 542 57.0
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 1.4e-176 623.6 544 57.9
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 1.8e-176 623.2 543 57.5
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 3.1e-176 622.5 542 57.9
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 5.3e-176 621.7 538 59.1
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 2.6e-175 619.4 542 55.4
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 5.9e-175 618.2 542 57.6
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.3e-174 617.1 542 56.6
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 1.7e-174 616.7 565 55.4
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 3.8e-174 615.5 543 56.0
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 3.8e-174 615.5 542 56.6
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 8.5e-174 614.4 550 56.4
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 4.2e-173 612.1 543 54.9
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 5.5e-173 611.7 550 56.4
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 5.5e-173 611.7 542 55.9
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 1.2e-172 610.5 542 55.9
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 3.6e-172 609.0 542 57.6
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 7.9e-172 607.8 546 57.9
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.4e-171 607.1 634 50.5
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 5.1e-171 605.1 544 57.0
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 6.7e-171 604.7 543 54.7
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 6.7e-171 604.7 542 57.2
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 8.8e-171 604.4 544 58.6
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 1.3e-169 600.5 542 56.1
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 2.8e-169 599.4 538 57.2
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 3.7e-169 599.0 542 55.9
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 1.8e-168 596.7 542 56.5
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 3.1e-168 595.9 493 61.1
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 5.3e-168 595.1 542 56.1
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 9.1e-168 594.3 543 56.5
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 3.5e-167 592.4 431 68.2
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 5.0e-166 588.6 544 54.0
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 8.8e-163 577.8 491 58.0
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 4.4e-162 575.5 603 51.9
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 5.5e-157 558.5 559 53.1
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 2.3e-155 553.1 593 51.4
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.3e-153 547.4 461 55.5
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.3e-145 520.8 449 58.6
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 7.0e-144 515.0 312 81.4
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 2.1e-140 503.4 472 53.6
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 2.8e-140 503.1 544 49.1
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 3.2e-136 489.6 467 51.8
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 2.3e-134 483.4 542 49.8
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.5e-133 480.7 553 48.1
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 1.5e-130 470.7 566 46.3
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 1.3e-126 457.6 555 45.2
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 4.6e-119 432.6 401 53.4
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 6.2e-116 422.2 478 47.7
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.6e-92 344.4 557 35.9
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 9.3e-88 328.6 182 86.8
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 4.3e-85 319.7 562 34.7
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 1.2e-82 311.6 573 34.6
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 4.6e-79 299.7 578 35.1
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.5e-77 294.7 571 34.9
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 2.5e-77 293.9 475 37.5
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 1.6e-76 291.2 223 63.7
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 6.7e-62 242.7 208 58.7
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 3.5e-50 203.8 248 43.1
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 3.5e-42 177.2 108 75.0
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 2.1e-31 141.4 197 40.1
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 1.6e-26 125.2 113 51.3
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 2.0e-26 124.8 76 77.6
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 2.8e-23 114.4 125 48.0
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 1.8e-19 101.7 60 70.0
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 3.0e-17 94.4 117 48.7
Glyma.19G197300 Glycine max HOM05D006431 ORTHO05D007918 5.6e-08 63.5 137 27.0
Glyma.03G199700 Glycine max HOM05D006431 ORTHO05D007918 1.2e-07 62.4 137 26.3
Phvul.001G193600 Phaseolus vulgaris HOM05D006431 ORTHO05D007918 1.6e-07 62.0 137 25.5
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 2.8e-07 61.2 57 52.6
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 8.9e-06 56.2 97 32.0


User provided reference genes

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