Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.7e-58 229.2 121 100.0
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 1.5e-57 226.1 121 98.3
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 5.7e-46 187.6 116 83.6
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 1.8e-44 182.6 116 78.4
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 3.1e-44 181.8 116 80.2
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 3.5e-43 178.3 116 77.6
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 4.5e-43 177.9 116 76.7
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 4.5e-43 177.9 116 77.6
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 1.7e-42 176.0 117 77.8
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 1.7e-42 176.0 120 75.8
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 2.9e-42 175.3 116 75.0
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 8.5e-42 173.7 114 78.1
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 1.5e-41 172.9 116 76.7
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 2.5e-41 172.2 116 72.4
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 2.5e-41 172.2 116 76.7
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 3.2e-41 171.8 116 77.6
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 4.2e-41 171.4 110 79.1
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 4.2e-41 171.4 113 76.1
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 4.2e-41 171.4 116 74.1
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 5.5e-41 171.0 112 79.5
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 5.5e-41 171.0 112 79.5
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 5.5e-41 171.0 112 79.5
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 5.5e-41 171.0 112 79.5
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 5.5e-41 171.0 112 79.5
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 5.5e-41 171.0 110 79.1
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 5.5e-41 171.0 112 78.6
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 7.2e-41 170.6 116 74.1
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 7.2e-41 170.6 105 81.0
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 9.5e-41 170.2 112 78.6
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 9.5e-41 170.2 116 76.7
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 1.2e-40 169.9 112 77.7
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 1.2e-40 169.9 114 78.1
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 1.6e-40 169.5 112 77.7
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 1.6e-40 169.5 116 73.3
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.6e-40 169.5 109 77.1
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 2.1e-40 169.1 105 80.0
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 2.1e-40 169.1 105 80.0
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 2.8e-40 168.7 106 77.4
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 2.8e-40 168.7 109 77.1
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 3.6e-40 168.3 116 73.3
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 3.6e-40 168.3 105 78.1
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 3.6e-40 168.3 116 73.3
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 3.6e-40 168.3 112 77.7
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 4.7e-40 167.9 112 77.7
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 6.1e-40 167.5 110 80.0
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 6.1e-40 167.5 110 76.4
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 6.1e-40 167.5 112 75.0
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 8.0e-40 167.2 112 75.9
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 1.0e-39 166.8 116 75.0
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 2.3e-39 165.6 116 72.4
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 2.3e-39 165.6 113 76.1
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 3.0e-39 165.2 109 75.2
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 4.0e-39 164.9 117 71.8
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 6.8e-39 164.1 105 79.0
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 8.8e-39 163.7 109 77.1
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 1.2e-38 163.3 114 72.8
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 1.5e-38 162.9 116 70.7
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 2.0e-38 162.5 110 74.5
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 2.0e-38 162.5 109 76.1
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 2.0e-38 162.5 109 76.1
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 3.4e-38 161.8 116 70.7
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 4.4e-38 161.4 110 74.5
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 4.4e-38 161.4 111 74.8
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 4.4e-38 161.4 112 74.1
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 5.7e-38 161.0 112 73.2
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 7.5e-38 160.6 112 73.2
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 7.5e-38 160.6 116 73.3
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 7.5e-38 160.6 112 74.1
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 9.8e-38 160.2 114 71.9
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 1.3e-37 159.8 112 73.2
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 2.2e-37 159.1 112 73.2
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 2.2e-37 159.1 110 70.9
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 2.2e-37 159.1 112 71.4
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 2.8e-37 158.7 110 72.7
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 4.9e-37 157.9 115 68.7
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 6.3e-37 157.5 117 70.1
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 1.1e-36 156.8 110 72.7
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 4.1e-36 154.8 104 76.9
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 9.2e-36 153.7 112 69.6
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 2.7e-35 152.1 110 72.7
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 3.5e-35 151.8 108 67.6
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 5.9e-35 151.0 97 80.4
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 1.7e-34 149.4 111 67.6
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 6.6e-34 147.5 116 64.7
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 1.2e-32 143.3 133 61.7
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 4.7e-32 141.4 172 50.0
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 2.3e-31 139.0 105 71.4
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 3.0e-31 138.7 105 68.6
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 3.0e-31 138.7 90 74.4
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 1.5e-30 136.3 87 77.0
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 2.0e-30 136.0 93 74.2
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 2.6e-30 135.6 87 77.0
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.6e-30 135.6 87 77.0
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 5.7e-30 134.4 87 77.0
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 9.8e-30 133.7 89 73.0
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.7e-29 132.9 82 79.3
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 2.9e-29 132.1 90 75.6
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 2.9e-29 132.1 82 78.0
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 3.7e-29 131.7 90 75.6
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 6.4e-29 131.0 91 75.8
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 1.1e-28 130.2 85 80.0
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.1e-28 130.2 87 74.7
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 1.2e-27 126.7 79 79.7
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 4.6e-27 124.8 86 74.4
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 1.3e-26 123.2 113 63.7
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 9.5e-25 117.1 78 76.9
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 1.3e-21 106.7 82 68.3
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 2.7e-19 99.0 78 66.7
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 5.0e-18 94.7 63 77.8
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 6.6e-18 94.4 106 51.9
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 5.6e-17 91.3 69 68.1
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.2e-16 90.1 76 65.8
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 1.2e-16 90.1 120 50.8
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 8.1e-16 87.4 50 84.0
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 3.1e-15 85.5 57 77.2
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 4.9e-13 78.2 117 41.9
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.1e-12 77.0 60 70.0
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 1.4e-12 76.6 114 44.7


User provided reference genes

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