Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 4.7e-75 284.6 167 100.0
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 3.1e-66 255.4 167 88.6
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 4.0e-50 201.8 170 66.5
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 1.4e-47 193.4 176 68.2
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 1.4e-47 193.4 176 60.2
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 1.9e-47 193.0 180 59.4
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 2.5e-47 192.6 172 63.4
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 2.5e-44 182.6 170 69.4
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 3.3e-44 182.2 172 61.0
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 4.3e-44 181.8 168 66.7
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 4.3e-44 181.8 169 60.9
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 9.7e-44 180.6 169 71.0
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 9.7e-44 180.6 174 56.9
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 1.6e-43 179.9 183 61.7
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 3.7e-43 178.7 168 66.1
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 6.3e-43 177.9 184 62.0
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 1.8e-42 176.4 169 63.9
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 2.4e-42 176.0 177 55.9
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 3.1e-42 175.6 172 66.3
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 3.1e-42 175.6 179 55.9
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 4.1e-42 175.3 174 61.5
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 6.9e-42 174.5 169 59.2
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 9.0e-42 174.1 168 56.0
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 1.5e-41 173.3 168 61.3
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 2.6e-41 172.6 168 59.5
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 3.4e-41 172.2 174 60.9
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 4.5e-41 171.8 174 62.1
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 5.9e-41 171.4 174 57.5
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 1.7e-40 169.9 166 65.1
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 2.2e-40 169.5 184 56.0
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 2.2e-40 169.5 170 61.8
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 2.2e-40 169.5 181 58.6
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 2.2e-40 169.5 183 53.6
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 2.9e-40 169.1 168 67.9
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 3.8e-40 168.7 170 65.9
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 5.0e-40 168.3 174 66.7
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 5.0e-40 168.3 186 54.8
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 8.5e-40 167.5 179 62.6
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 2.5e-39 166.0 168 57.1
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 3.2e-39 165.6 131 71.8
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 5.5e-39 164.9 132 68.9
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 5.5e-39 164.9 179 57.0
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 1.2e-38 163.7 177 53.7
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 1.2e-38 163.7 186 54.3
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 6.1e-38 161.4 174 55.2
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 7.9e-38 161.0 182 54.4
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 3.0e-37 159.1 182 57.7
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 1.3e-35 153.7 128 62.5
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 1.3e-35 153.7 169 63.3
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 2.2e-35 152.9 180 51.1
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 6.3e-35 151.4 177 52.0
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 3.1e-34 149.1 188 51.1
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 1.0e-32 144.1 169 60.9
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 2.2e-32 142.9 178 51.1
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 6.5e-32 141.4 123 63.4
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 6.5e-32 141.4 176 51.7
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 1.1e-31 140.6 117 59.8
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 3.2e-31 139.0 192 56.2
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 2.1e-30 136.3 135 58.5
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 2.7e-30 136.0 112 66.1
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 4.7e-30 135.2 167 53.9
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 7.9e-30 134.4 128 58.6
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 2.3e-29 132.9 193 48.2
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 5.1e-29 131.7 177 53.1
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 6.7e-29 131.3 117 57.3
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 8.8e-29 131.0 131 58.0
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 1.1e-28 130.6 120 60.8
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 2.0e-28 129.8 176 49.4
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 2.0e-28 129.8 137 51.8
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 2.6e-28 129.4 133 54.1
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 2.6e-28 129.4 118 58.5
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 2.6e-28 129.4 180 46.7
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 3.3e-28 129.0 119 59.7
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 4.4e-28 128.6 117 56.4
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 4.4e-28 128.6 118 56.8
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 4.4e-28 128.6 184 45.7
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 7.4e-28 127.9 184 54.9
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 2.2e-27 126.3 117 55.6
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 2.2e-27 126.3 117 55.6
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 2.2e-27 126.3 118 56.8
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 3.7e-27 125.6 137 51.1
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 3.7e-27 125.6 137 51.1
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 3.7e-27 125.6 137 51.1
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 9.1e-26 120.9 123 56.1
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 2.0e-25 119.8 181 48.1
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 4.5e-25 118.6 167 50.3
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 7.7e-25 117.9 167 49.7
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.7e-24 116.7 177 52.0
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 2.7e-22 109.4 144 47.9
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 1.4e-21 107.1 148 46.6
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 1.8e-21 106.7 182 45.1
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 1.5e-20 103.6 123 47.2
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 7.4e-20 101.3 178 44.9
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 1.7e-19 100.1 110 56.4
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 1.2e-17 94.0 180 41.7
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 4.5e-17 92.0 179 46.9
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 4.5e-17 92.0 150 43.3
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 5.0e-16 88.6 74 68.9
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 1.2e-14 84.0 182 36.3
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 3.0e-13 79.3 176 37.5
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.6e-12 76.3 132 44.7
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 1.3e-11 73.9 74 62.2
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 1.3e-11 73.9 176 34.7
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 3.7e-11 72.4 140 36.4
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 3.1e-10 69.3 170 37.6
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 4.1e-10 68.9 75 48.0
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 1.6e-09 67.0 132 38.6


User provided reference genes

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