Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 6.6e-93 344.0 167 100.0
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 9.9e-73 276.9 175 81.1
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 5.1e-61 238.0 169 74.0
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 6.9e-58 227.6 171 70.2
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 1.2e-57 226.9 172 70.9
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 5.8e-57 224.6 166 71.1
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 8.4e-56 220.7 162 70.4
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 2.4e-55 219.2 172 65.7
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 9.3e-55 217.2 170 65.9
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 2.1e-54 216.1 149 69.8
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 2.3e-53 212.6 179 64.2
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 3.9e-53 211.8 171 65.5
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 1.9e-52 209.5 179 63.1
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 2.5e-52 209.1 165 67.3
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 2.8e-51 205.7 151 68.9
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 8.2e-51 204.1 167 62.9
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 1.4e-50 203.4 174 63.8
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 1.4e-50 203.4 164 66.5
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 1.8e-50 203.0 170 65.9
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.8e-50 203.0 151 67.5
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 1.5e-49 199.9 158 63.9
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 5.8e-49 198.0 171 62.6
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 5.8e-49 198.0 148 66.2
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.7e-48 196.4 171 62.6
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 8.4e-48 194.1 153 62.7
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.4e-47 193.4 174 61.5
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 4.2e-47 191.8 123 77.2
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 5.5e-47 191.4 171 61.4
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 1.2e-46 190.3 133 66.2
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 1.6e-46 189.9 167 58.7
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 2.1e-46 189.5 153 61.4
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 1.0e-45 187.2 140 67.9
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 1.0e-45 187.2 140 67.9
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.0e-45 187.2 130 68.5
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 1.0e-45 187.2 106 81.1
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 1.8e-45 186.4 151 63.6
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 2.3e-45 186.0 127 74.8
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 3.9e-45 185.3 150 60.7
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 6.7e-45 184.5 138 65.2
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 6.7e-45 184.5 167 61.1
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 1.1e-44 183.7 163 58.3
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 1.9e-44 183.0 174 56.3
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 2.5e-44 182.6 117 72.6
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 7.4e-44 181.0 169 56.8
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 1.6e-43 179.9 161 64.0
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 2.2e-43 179.5 175 58.3
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 2.2e-43 179.5 152 61.2
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 3.7e-43 178.7 133 64.7
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 1.4e-42 176.8 148 61.5
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 1.8e-42 176.4 157 63.1
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 5.3e-42 174.9 106 75.5
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 6.9e-42 174.5 123 69.1
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 9.0e-42 174.1 124 68.5
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 2.0e-41 172.9 165 55.8
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 3.4e-41 172.2 166 54.2
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 4.5e-41 171.8 117 71.8
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 7.6e-41 171.0 151 58.9
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 2.9e-40 169.1 185 55.1
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 2.9e-40 169.1 198 52.0
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 3.8e-40 168.7 131 63.4
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 3.8e-40 168.7 140 60.0
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 2.5e-39 166.0 152 55.9
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 2.1e-38 162.9 149 55.0
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 3.6e-38 162.2 100 74.0
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 4.6e-38 161.8 119 64.7
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 6.1e-38 161.4 109 67.9
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 6.1e-38 161.4 111 66.7
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 6.1e-38 161.4 107 70.1
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 7.9e-38 161.0 95 82.1
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 1.4e-37 160.2 128 60.2
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 1.4e-37 160.2 131 58.8
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 1.8e-37 159.8 111 65.8
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 2.3e-37 159.5 111 65.8
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 2.3e-37 159.5 119 64.7
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 3.9e-37 158.7 164 50.6
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 3.9e-37 158.7 164 50.6
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 5.1e-37 158.3 128 59.4
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 5.1e-37 158.3 128 59.4
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 5.1e-37 158.3 128 59.4
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 3.3e-36 155.6 162 51.9
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 4.3e-36 155.2 89 84.3
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 2.2e-35 152.9 146 62.3
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 1.1e-34 150.6 103 72.8
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 6.9e-34 147.9 138 53.6
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 1.5e-33 146.7 181 48.6
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 2.6e-33 146.0 94 74.5
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 4.5e-33 145.2 135 54.1
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 4.5e-33 145.2 140 59.3
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 2.9e-32 142.5 125 60.0
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 1.1e-31 140.6 131 55.7
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 7.2e-31 137.9 134 55.2
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 1.2e-30 137.1 151 47.7
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 1.6e-30 136.7 95 65.3
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 1.0e-29 134.0 104 61.5
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 3.0e-29 132.5 105 57.1
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 2.6e-28 129.4 107 51.4
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 9.7e-28 127.5 98 68.4
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.8e-26 123.2 73 78.1
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 1.4e-21 107.1 78 61.5
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 3.9e-21 105.5 101 59.4
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.7e-19 100.1 63 74.6
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 1.4e-18 97.1 75 61.3
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 7.0e-18 94.7 170 38.8
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 6.5e-16 88.2 58 72.4
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 3.0e-13 79.3 172 37.2
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 4.4e-12 75.5 112 48.2
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 7.5e-12 74.7 40 82.5


User provided reference genes

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