Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 8.0e-126 453.8 225 100.0
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.1e-58 230.7 125 88.8
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 1.4e-45 187.2 124 72.6
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 2.0e-44 183.3 125 68.8
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 4.5e-44 182.2 138 63.8
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 1.0e-43 181.0 125 67.2
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 1.7e-43 180.3 125 69.6
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 6.5e-43 178.3 125 68.8
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 1.1e-42 177.6 125 66.4
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 1.1e-42 177.6 129 66.7
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.5e-42 176.4 125 66.4
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.5e-42 176.4 125 66.4
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.5e-42 176.4 125 66.4
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 9.3e-42 174.5 125 67.2
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 2.7e-41 172.9 129 67.4
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 1.3e-40 170.6 116 69.0
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.8e-40 170.2 129 64.3
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 2.3e-40 169.9 127 65.4
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 3.0e-40 169.5 129 64.3
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 3.0e-40 169.5 125 62.4
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 5.7e-39 165.2 125 60.0
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 2.1e-38 163.3 119 63.9
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 2.1e-38 163.3 120 60.8
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 6.3e-38 161.8 108 69.4
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 1.1e-37 161.0 126 60.3
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 1.1e-37 161.0 125 60.8
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 2.4e-37 159.8 125 60.8
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 3.1e-37 159.5 102 70.6
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 6.9e-37 158.3 125 57.6
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 9.0e-37 157.9 117 65.8
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.2e-36 157.5 126 58.7
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 1.2e-36 157.5 126 59.5
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 1.5e-36 157.1 125 57.6
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 2.0e-36 156.8 116 63.8
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 3.4e-36 156.0 119 58.0
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.0e-35 154.5 118 58.5
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 1.0e-35 154.5 126 58.7
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.2e-35 153.3 119 57.1
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 2.9e-35 152.9 126 57.9
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 6.5e-35 151.8 119 58.8
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 8.4e-35 151.4 126 58.7
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.4e-34 150.6 118 57.6
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 4.2e-34 149.1 116 61.2
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 7.2e-34 148.3 123 56.9
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 9.3e-34 147.9 119 60.5
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.6e-33 147.1 122 55.7
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 1.0e-32 144.4 116 58.6
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.8e-32 143.7 120 54.2
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 2.3e-32 143.3 122 58.2
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 3.0e-32 142.9 120 55.8
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 5.1e-32 142.1 129 56.6
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 6.7e-32 141.7 120 53.3
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 1.5e-31 140.6 121 57.0
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 3.3e-31 139.4 120 50.8
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 2.2e-30 136.7 128 52.3
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 3.7e-30 136.0 123 55.3
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 6.3e-30 135.2 119 54.6
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.1e-29 132.9 105 60.0
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.9e-29 131.7 109 56.0
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.2e-28 131.0 110 56.4
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.2e-28 131.0 110 56.4
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.5e-28 130.6 111 55.0
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 2.0e-28 130.2 111 55.0
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.8e-27 125.9 125 52.0
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.0e-27 125.6 124 52.4
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 5.0e-27 125.6 100 60.0
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 1.1e-23 114.4 107 48.6
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 1.5e-23 114.0 101 51.5
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 2.5e-18 96.7 104 45.2
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 5.5e-18 95.5 114 43.0
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 1.2e-17 94.4 106 46.2
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.7e-17 93.2 115 40.9
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.6e-17 92.8 125 36.8
PGSC0003DMG400029246 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.6e-17 92.8 65 60.0
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 6.1e-17 92.0 117 34.2
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 1.0e-16 91.3 117 39.3
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.4e-16 90.9 111 39.6
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 1.8e-16 90.5 102 43.1
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.8e-16 90.5 120 39.2
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.3e-16 90.1 102 43.1
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 5.1e-16 89.0 101 42.6
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.1e-15 87.8 111 37.8
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.5e-15 87.4 106 40.6
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.7e-14 82.8 117 36.8
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 4.8e-14 82.4 119 38.7
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.3e-14 82.0 105 39.0
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.4e-13 80.1 124 29.8
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.1e-13 79.7 120 34.2
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 9.1e-13 78.2 109 34.9
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.6e-12 77.4 109 32.1
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.6e-12 77.4 91 42.9
SMO364G0778 Selaginella moellendorffii HOM05D006839 ORTHO05D007872 5.9e-12 75.5 120 32.5
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 1.0e-11 74.7 55 58.2
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 2.2e-11 73.6 101 34.7
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.0e-11 72.4 93 39.8
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.5e-10 70.9 124 35.5
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.5e-10 68.9 82 42.7
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 9.4e-10 68.2 114 34.2
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 9.4e-10 68.2 120 31.7
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.7e-09 66.6 104 35.6
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 2.0e-07 60.5 103 32.0
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 2.0e-07 60.5 103 32.0
Peaxi162Scf00681g00011 Petunia axillaris HOM05D006839 ORTHO05D007872 1.7e-06 57.4 65 46.2
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 2.2e-06 57.0 126 30.2


User provided reference genes

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