Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0154300 Salix brachista HOM05D007374 ORTHO05D009283 5.2e-160 567.8 307 100.0
Potri.005G203100 Populus trichocarpa HOM05D007374 ORTHO05D009283 2.7e-124 449.1 281 89.3
QL08p044444 Quercus lobata HOM05D007374 ORTHO05D009283 8.2e-65 251.5 287 54.0
Prupe.3G174200 Prunus persica HOM05D007374 ORTHO05D009283 1.8e-64 250.4 283 53.0
Atru.chr6.2078 Acer truncatum HOM05D007374 ORTHO05D009283 4.1e-64 249.2 287 53.7
TAR627G0951 Trochodendron aralioides HOM05D007374 ORTHO05D009283 3.4e-63 246.1 282 53.9
Ciclev10032166m.g Citrus clementina HOM05D007374 ORTHO05D009283 5.0e-62 242.3 276 54.3
Glyma.02G285800 Glycine max HOM05D007374 ORTHO05D009283 5.0e-62 242.3 256 53.9
Cfa021554 Carpinus fangiana HOM05D007374 ORTHO05D009283 6.5e-62 241.9 279 52.7
MD17G1138200 Malus domestica HOM05D007374 ORTHO05D009283 6.5e-62 241.9 283 52.7
CiPaw.03G190900 Carya illinoinensis HOM05D007374 ORTHO05D009283 7.2e-61 238.4 268 54.1
FAN14G0493 Fragaria x ananassa HOM05D007374 ORTHO05D009283 1.5e-58 230.7 274 49.6
Gorai.012G040800 Gossypium raimondii HOM05D007374 ORTHO05D009283 1.5e-58 230.7 283 51.9
LjContig00049g0002262 Lotus japonicus HOM05D007374 ORTHO05D009283 1.5e-58 230.7 262 51.5
FvH4_6g38360 Fragaria vesca HOM05D007374 ORTHO05D009283 5.7e-58 228.8 274 48.9
Gohir.D04G035900 Gossypium hirsutum HOM05D007374 ORTHO05D009283 2.8e-57 226.5 283 51.2
Psat2g016160 Pisum sativum HOM05D007374 ORTHO05D009283 2.8e-57 226.5 269 48.0
Gohir.A05G379500 Gossypium hirsutum HOM05D007374 ORTHO05D009283 3.7e-57 226.1 283 50.9
Medtr5g091560 Medicago truncatula HOM05D007374 ORTHO05D009283 3.7e-57 226.1 264 50.4
PGR042G1022 Punica granatum HOM05D007374 ORTHO05D009283 3.7e-57 226.1 279 50.5
Thecc.01G163300 Theobroma cacao HOM05D007374 ORTHO05D009283 4.8e-57 225.7 283 49.8
VMungo0647G1819 Vigna mungo HOM05D007374 ORTHO05D009283 1.1e-56 224.6 256 50.8
Phvul.008G231728 Phaseolus vulgaris HOM05D007374 ORTHO05D009283 1.4e-56 224.2 256 49.6
COL.COLO4_00303 Corchorus olitorius HOM05D007374 ORTHO05D009283 1.8e-56 223.8 287 49.8
Dinv02438 Davidia involucrata HOM05D007374 ORTHO05D009283 9.1e-56 221.5 274 51.1
Solyc10g007730.3 Solanum lycopersicum HOM05D007374 ORTHO05D009283 1.2e-55 221.1 257 50.2
Lalb_Chr10g0106631 Lupinus albus HOM05D007374 ORTHO05D009283 1.5e-55 220.7 253 50.2
Nn4g26487 Nelumbo nucifera HOM05D007374 ORTHO05D009283 2.6e-55 219.9 286 49.3
PGSC0003DMG400021285 Solanum tuberosum HOM05D007374 ORTHO05D009283 1.7e-54 217.2 257 51.4
Cpa.g.sc1195.1 Carica papaya HOM05D007374 ORTHO05D009283 2.2e-54 216.9 295 49.8
vmacro01388 Vaccinium macrocarpon HOM05D007374 ORTHO05D009283 2.2e-54 216.9 281 47.7
Rhsim12G0085200 Rhododendron simsii HOM05D007374 ORTHO05D009283 3.8e-54 216.1 286 49.7
Glyma.14G028800 Glycine max HOM05D007374 ORTHO05D009283 6.5e-54 215.3 257 49.0
Sopen10g003640 Solanum pennellii HOM05D007374 ORTHO05D009283 6.5e-54 215.3 257 49.8
Eucgr.A01989 Eucalyptus grandis HOM05D007374 ORTHO05D009283 1.4e-53 214.2 292 47.6
TPR.G12560 Trifolium pratense HOM05D007374 ORTHO05D009283 1.4e-53 214.2 259 47.9
FAN09G2358 Fragaria x ananassa HOM05D007374 ORTHO05D009283 1.9e-53 213.8 319 43.3
AL1G16540 Arabidopsis lyrata HOM05D007374 ORTHO05D009283 5.5e-53 212.2 281 47.0
FAN05G2216 Fragaria x ananassa HOM05D007374 ORTHO05D009283 2.7e-52 209.9 319 42.9
CAN.G2018.2 Capsicum annuum HOM05D007374 ORTHO05D009283 3.6e-52 209.5 257 50.2
GSVIVG01020866001 Vitis vinifera HOM05D007374 ORTHO05D009283 4.7e-52 209.1 254 51.6
Sp1g05270 Schrenkiella parvula HOM05D007374 ORTHO05D009283 6.1e-52 208.8 278 47.1
BcaB02g06801 Brassica carinata HOM05D007374 ORTHO05D009283 1.4e-51 207.6 278 46.0
Thhalv10009532m.g Eutrema salsugineum HOM05D007374 ORTHO05D009283 3.9e-51 206.1 259 47.5
FAN02G3372 Fragaria x ananassa HOM05D007374 ORTHO05D009283 5.2e-51 205.7 319 42.6
Carub.0001s0588 Capsella rubella HOM05D007374 ORTHO05D009283 8.8e-51 204.9 285 46.7
Nitab4.5_0002209g0060 Nicotiana tabacum HOM05D007374 ORTHO05D009283 8.8e-51 204.9 240 52.1
BraA10t42783Z Brassica rapa HOM05D007374 ORTHO05D009283 2.0e-50 203.8 278 46.0
Sed0010749 Sechium edule HOM05D007374 ORTHO05D009283 2.6e-50 203.4 265 47.2
A10p05160 Brassica napus HOM05D007374 ORTHO05D009283 3.3e-50 203.0 278 46.0
BolC5t29248H Brassica oleracea HOM05D007374 ORTHO05D009283 3.3e-50 203.0 278 46.0
C05p04770 Brassica napus HOM05D007374 ORTHO05D009283 4.4e-50 202.6 278 46.8
Haze_13514 Corylus avellana HOM05D007374 ORTHO05D009283 7.4e-50 201.8 225 52.9
ECA234G2656 Erigeron canadensis HOM05D000461 ORTHO05D001840 1.3e-49 201.1 268 47.4
RcHm_v2.0_Chr2g0151671 Rosa chinensis HOM05D007374 ORTHO05D009283 2.2e-49 200.3 248 48.4
arahy.Tifrunner.gnm1.ann1.PL1TQM Arachis hypogaea HOM05D007374 ORTHO05D009283 1.1e-48 198.0 249 48.2
MELO3C012638.2 Cucumis melo HOM05D007374 ORTHO05D009283 1.4e-48 197.6 270 46.3
HanXRQChr01g0028771 Helianthus annuus HOM05D007374 ORTHO05D009283 1.8e-48 197.2 269 44.6
Hund08257 Selenicereus undatus HOM05D007374 ORTHO05D009283 2.4e-48 196.8 257 47.9
CsaV3_7G022640 Cucumis sativus L. HOM05D007374 ORTHO05D009283 3.1e-48 196.4 270 46.3
arahy.Tifrunner.gnm1.ann1.G50Y2D Arachis hypogaea HOM05D007374 ORTHO05D009283 5.3e-48 195.7 250 50.4
Lsat_1_v5_gn_4_26980 Lactuca sativa HOM05D007374 ORTHO05D009283 5.3e-48 195.7 262 46.6
ClCG09G022490 Citrullus lanatus HOM05D007374 ORTHO05D009283 1.7e-46 190.7 276 45.7
Cc05_g09580 Coffea canephora HOM05D007374 ORTHO05D009283 2.9e-46 189.9 272 45.2
AT1G06510 Arabidopsis thaliana HOM05D007374 ORTHO05D009283 3.8e-46 189.5 278 43.2
Ca_30616_v3 Cicer arietinum L. HOM05D007374 ORTHO05D009283 3.8e-46 189.5 225 48.4
Oeu005608.1 Olea europaea HOM05D007374 ORTHO05D009283 8.5e-46 188.3 238 48.7
Lj1A605T43 Lonicera japonica HOM05D007374 ORTHO05D009283 9.4e-45 184.9 223 49.8
Aqoxy4G00135 Aquilegia oxysepala HOM05D007374 ORTHO05D009283 6.7e-43 178.7 260 43.8
Peaxi162Scf00035g00262 Petunia axillaris HOM05D007374 ORTHO05D009283 1.2e-42 177.9 306 43.5
LjContig00141g0020215 Lotus japonicus HOM05D007374 ORTHO05D009283 5.7e-42 175.6 247 44.1
Migut.M00488 Erythranthe guttata HOM05D007374 ORTHO05D009283 1.3e-41 174.5 250 44.0
BcaC04g23554 Brassica carinata HOM05D007374 ORTHO05D009283 1.1e-40 171.4 267 42.7
EL10Ac9g22854 Beta vulgaris HOM05D007374 ORTHO05D009283 1.4e-40 171.0 281 42.0
AUR62015143 Chenopodium quinoa HOM05D007374 ORTHO05D009283 2.4e-40 170.2 269 43.9
CDE02G0809 Ceratophyllum demersum HOM05D007374 ORTHO05D009283 3.1e-40 169.9 245 40.8
AUR62017602 Chenopodium quinoa HOM05D007374 ORTHO05D009283 5.3e-40 169.1 269 43.5
DCAR_009800 Daucus carota HOM05D007374 ORTHO05D009283 3.5e-39 166.4 268 42.9
Ah.01g013460 Amaranthus hybridus HOM05D007374 ORTHO05D009283 4.5e-39 166.0 254 44.5
SGA_v2.0_scaffold70G23631 Striga asiatica HOM05D007374 ORTHO05D009283 4.5e-39 166.0 256 44.9
HPP92_024591 Vanilla planifolia HOM05D007374 ORTHO05D009283 5.0e-38 162.5 245 41.2
HPP92_024519 Vanilla planifolia HOM05D007374 ORTHO05D009283 4.2e-37 159.5 253 41.1
Ca_06277_v3 Cicer arietinum L. HOM05D007374 ORTHO05D009283 1.2e-36 157.9 206 44.2
Aa31LG1G7610 Aethionema arabicum HOM05D007374 ORTHO05D009283 7.5e-34 148.7 276 39.9
MSTRG.15040 Avicennia marina HOM05D007374 ORTHO05D009283 2.8e-33 146.7 268 38.4
Nitab4.5_0003104g0030 Nicotiana tabacum HOM05D007374 ORTHO05D009283 6.3e-33 145.6 155 52.9
unitig_746.g26685 Utricularia gibba HOM05D002434 ORTHO05D002743 8.0e-28 128.6 225 39.1
QL08p044527 Quercus lobata HOM05D007374 ORTHO05D009283 1.0e-27 128.3 115 65.2
Sc06g0007570 Simmondsia chinensis HOM05D007374 ORTHO05D009283 5.2e-27 125.9 189 41.3
HanXRQChr17g0565851 Helianthus annuus HOM05D007374 ORTHO05D009283 1.5e-26 124.4 153 49.7
MD09G1150800 Malus domestica HOM05D007374 ORTHO05D009283 3.4e-26 123.2 152 52.0
CDE09G1208 Ceratophyllum demersum HOM05D007374 ORTHO05D009283 7.5e-26 122.1 243 33.3
Zm00001eb155870 Zea mays HOM05D007374 ORTHO05D009283 1.6e-23 114.4 254 32.3
Actinidia00867 Actinidia chinensis HOM05D007374 ORTHO05D009283 4.5e-23 112.8 100 64.0
Os01g0696000 Oryza sativa ssp. japonica HOM05D007374 ORTHO05D009283 7.8e-23 112.1 251 32.3
SalBow8G1446 Salvia bowleyana HOM05D007374 ORTHO05D009283 9.5e-21 105.1 114 54.4
CARHR006130 Cardamine hirsuta HOM05D007374 ORTHO05D009283 1.0e-19 101.7 168 40.5
Hma1.2p1_0081F.1_g042230 Hydrangea macrophylla HOM05D007374 ORTHO05D009283 1.4e-16 91.3 76 63.2
Pp3c6_23840 Physcomitrium patens HOM05D007374 ORTHO05D009283 5.4e-16 89.4 103 48.5
Actinidia00868 Actinidia chinensis HOM05D007374 ORTHO05D009283 7.8e-15 85.5 69 62.3
QL08p044531 Quercus lobata HOM05D007374 ORTHO05D009283 1.5e-13 81.3 158 40.5
Mapoly0086s0079 Marchantia polymorpha HOM05D007374 ORTHO05D009283 2.9e-09 67.0 132 36.4
HanXRQChr14g0433321 Helianthus annuus HOM05D007374 ORTHO05D009283 2.4e-08 63.9 78 43.6
CBR_g17125 Chara braunii HOM05D007374 ORTHO05D009283 1.2e-07 61.6 97 36.1


User provided reference genes

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