Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 3.1e-67 258.5 142 100.0
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 3.0e-46 188.7 116 93.1
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 5.3e-43 177.9 148 74.3
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 2.6e-42 175.6 116 87.1
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 7.2e-40 167.5 116 80.2
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 1.6e-39 166.4 127 76.4
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.1e-39 166.0 131 77.9
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 2.7e-39 165.6 127 76.4
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 3.6e-39 165.2 127 76.4
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 6.1e-39 164.5 128 73.4
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 6.1e-39 164.5 112 83.0
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 7.9e-39 164.1 125 73.6
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 7.9e-39 164.1 130 73.8
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 1.4e-38 163.3 128 72.7
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 3.0e-38 162.2 131 71.8
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 3.0e-38 162.2 122 75.4
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 3.0e-38 162.2 122 74.6
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 3.0e-38 162.2 122 75.4
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 5.2e-38 161.4 116 80.2
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 6.7e-38 161.0 122 74.6
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 6.7e-38 161.0 122 74.6
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 6.7e-38 161.0 115 81.7
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 8.8e-38 160.6 122 73.8
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 8.8e-38 160.6 122 74.6
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 8.8e-38 160.6 108 80.6
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 1.1e-37 160.2 122 74.6
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 1.1e-37 160.2 123 74.0
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 1.5e-37 159.8 122 74.6
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 2.0e-37 159.5 108 80.6
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.6e-37 159.1 127 74.0
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 2.6e-37 159.1 122 73.8
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 3.3e-37 158.7 122 73.8
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 3.3e-37 158.7 114 78.9
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 3.3e-37 158.7 127 74.0
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 3.3e-37 158.7 108 82.4
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 4.4e-37 158.3 107 80.4
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 9.7e-37 157.1 122 73.0
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 9.7e-37 157.1 116 77.6
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 9.7e-37 157.1 129 72.1
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.7e-36 156.4 116 75.9
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.7e-36 156.4 108 80.6
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 2.2e-36 156.0 131 70.2
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 2.8e-36 155.6 113 75.2
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 2.8e-36 155.6 125 72.8
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 3.7e-36 155.2 125 72.0
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 4.8e-36 154.8 129 70.5
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 4.8e-36 154.8 129 70.5
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 4.8e-36 154.8 125 72.8
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 4.8e-36 154.8 108 78.7
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 4.8e-36 154.8 131 71.0
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 6.3e-36 154.5 131 71.0
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 8.2e-36 154.1 123 71.5
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 1.1e-35 153.7 122 72.1
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 1.4e-35 153.3 113 74.3
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 1.4e-35 153.3 108 79.6
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.4e-35 153.3 108 79.6
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.4e-35 153.3 97 88.7
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 1.4e-35 153.3 108 78.7
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 1.8e-35 152.9 123 71.5
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 1.8e-35 152.9 123 72.4
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 2.4e-35 152.5 105 81.9
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.1e-35 152.1 108 78.7
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 7.0e-35 151.0 116 77.6
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 7.0e-35 151.0 116 77.6
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 9.1e-35 150.6 108 77.8
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 9.1e-35 150.6 108 77.8
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.2e-34 150.2 116 75.0
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 1.2e-34 150.2 125 71.2
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 1.2e-34 150.2 125 71.2
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.2e-34 150.2 133 66.9
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 1.6e-34 149.8 127 69.3
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 1.6e-34 149.8 128 68.8
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.6e-34 149.1 119 74.8
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 3.5e-34 148.7 118 73.7
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 4.5e-34 148.3 114 74.6
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 5.9e-34 147.9 103 77.7
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 7.7e-34 147.5 127 68.5
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 7.7e-34 147.5 131 67.9
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 1.3e-33 146.7 103 78.6
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 2.9e-33 145.6 118 72.0
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 3.8e-33 145.2 105 77.1
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 3.8e-33 145.2 105 77.1
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 8.5e-33 144.1 109 73.4
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 8.5e-33 144.1 123 65.0
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 1.9e-32 142.9 131 66.4
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 2.5e-32 142.5 98 80.6
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 5.5e-32 141.4 129 65.9
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 5.5e-32 141.4 102 76.5
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 5.5e-32 141.4 131 66.4
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 7.2e-32 141.0 104 76.0
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 7.2e-32 141.0 103 72.8
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 1.2e-31 140.2 98 81.6
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 2.1e-31 139.4 120 66.7
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 4.7e-31 138.3 106 75.5
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 6.1e-31 137.9 120 66.7
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 1.4e-30 136.7 102 76.5
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 2.3e-30 136.0 99 80.8
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 2.3e-30 136.0 112 69.6
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.0e-30 135.2 108 66.7
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 8.8e-30 134.0 103 71.8
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 1.5e-29 133.3 96 81.2
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 4.4e-29 131.7 107 70.1
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 5.7e-29 131.3 131 59.5
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 9.7e-29 130.6 136 60.3
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 6.3e-28 127.9 102 73.5
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 1.4e-27 126.7 91 80.2
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 3.1e-27 125.6 122 62.3
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 7.0e-27 124.4 92 73.9
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 2.7e-26 122.5 88 80.7
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 5.9e-26 121.3 119 58.8
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.9e-25 119.0 84 81.0
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 2.9e-25 119.0 84 81.0
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 3.8e-25 118.6 133 57.9
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 1.6e-23 113.2 131 58.8
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 1.5e-21 106.7 113 53.1
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 2.6e-21 105.9 106 51.9
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 5.7e-21 104.8 108 56.5
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 5.4e-19 98.2 66 80.3
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 5.9e-18 94.7 133 51.1
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 5.5e-16 88.2 103 46.6
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 1.8e-11 73.2 58 67.2
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 2.4e-11 72.8 55 74.5
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 2.0e-10 69.7 46 76.1
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 4.5e-10 68.6 44 77.3
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.6e-07 60.1 45 75.6
Oeu011770.1 Olea europaea HOM05D004115 ORTHO05D005004 2.3e-06 56.2 42 66.7


User provided reference genes

Program Settings