Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 7.4e-160 567.4 339 100.0
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 1.1e-107 394.0 285 92.3
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 1.9e-91 340.1 293 79.9
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 1.1e-81 307.8 281 65.8
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 5.3e-81 305.4 276 67.0
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 2.3e-36 157.1 280 46.4
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 2.7e-29 133.7 272 37.5
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 2.3e-28 130.6 272 41.5
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 2.3e-28 130.6 272 41.5
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 2.2e-26 124.0 284 35.2
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 1.4e-25 121.3 288 34.0
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 9.1e-25 118.6 280 34.3
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 9.1e-25 118.6 243 39.1
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 2.7e-24 117.1 243 38.7
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 3.5e-24 116.7 263 36.9
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 5.9e-24 115.9 298 35.6
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 1.3e-23 114.8 243 39.1
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 8.6e-23 112.1 256 35.5
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 3.3e-22 110.2 259 37.5
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 7.2e-22 109.0 263 36.1
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 7.2e-22 109.0 288 32.3
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 7.2e-22 109.0 247 36.8
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 1.2e-21 108.2 246 33.7
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.1e-21 107.5 268 35.4
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.1e-21 107.5 268 35.4
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.1e-21 107.5 268 35.4
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 2.8e-21 107.1 271 33.6
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 2.8e-21 107.1 276 35.5
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 2.8e-21 107.1 276 35.1
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 8.0e-21 105.5 224 39.7
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 1.0e-20 105.1 263 35.7
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 1.0e-20 105.1 293 32.8
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 5.2e-20 102.8 272 33.8
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 8.9e-20 102.1 170 40.6
TWI23G0841 Tripterygium wilfordii HOM05D003457 ORTHO05D009249 1.5e-19 101.3 254 36.6
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 2.6e-19 100.5 273 33.3
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 2.6e-19 100.5 271 34.7
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 3.4e-19 100.1 273 33.3
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 4.4e-19 99.8 267 33.0
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 1.3e-18 98.2 270 34.4
RcHm_v2.0_Chr1g0382841 Rosa chinensis HOM05D003457 ORTHO05D009249 2.8e-18 97.1 276 35.5
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 4.9e-18 96.3 282 35.8
Cfa016162 Carpinus fangiana HOM05D003457 ORTHO05D009249 6.3e-18 95.9 274 39.1
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 3.2e-17 93.6 269 33.8
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 3.2e-17 93.6 270 33.3
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 4.1e-17 93.2 274 32.8
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 7.0e-17 92.4 171 38.6
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 7.0e-17 92.4 278 31.7
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 1.2e-16 91.7 248 32.3
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 1.2e-16 91.7 295 34.6
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 1.6e-16 91.3 255 34.5
Atru.chr12.2426 Acer truncatum HOM05D003457 ORTHO05D009249 4.5e-16 89.7 167 38.9
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 7.8e-16 89.0 278 35.3
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 7.8e-16 89.0 154 42.2
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 7.8e-16 89.0 283 29.3
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 7.8e-16 89.0 176 40.3
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 1.0e-15 88.6 194 39.7
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 2.3e-15 87.4 232 33.2
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 1.1e-14 85.1 247 34.8
Medtr3g092670 Medicago truncatula HOM05D003457 ORTHO05D009249 1.9e-14 84.3 257 30.4
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 2.5e-14 84.0 210 33.8
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 3.3e-14 83.6 162 38.3
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 3.3e-14 83.6 169 36.1
Glyma.06G136400 Glycine max HOM05D003457 ORTHO05D009249 3.3e-14 83.6 245 32.7
Psat5g072040 Pisum sativum HOM05D003457 ORTHO05D009249 3.3e-14 83.6 257 29.6
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 5.6e-14 82.8 271 30.3
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 9.5e-14 82.0 116 48.3
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 9.5e-14 82.0 149 38.3
EL10Ac3g05182 Beta vulgaris HOM05D003457 ORTHO05D009249 1.2e-13 81.6 162 42.6
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 1.2e-13 81.6 217 33.2
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 1.2e-13 81.6 276 31.9
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 1.6e-13 81.3 272 32.0
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 2.1e-13 80.9 231 33.3
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 2.8e-13 80.5 208 34.1
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 4.7e-13 79.7 266 30.8
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 6.1e-13 79.3 251 29.5
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 6.1e-13 79.3 258 30.6
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 6.1e-13 79.3 170 37.1
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 6.1e-13 79.3 170 37.1
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 8.0e-13 79.0 170 36.5
Lj1g0002342 Lotus japonicus HOM05D003457 ORTHO05D009249 8.0e-13 79.0 259 32.0
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 1.0e-12 78.6 168 36.3
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 1.4e-12 78.2 140 40.7
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 1.4e-12 78.2 241 30.3
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 1.8e-12 77.8 147 39.5
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 2.3e-12 77.4 245 33.5
QL09p007211 Quercus lobata HOM05D003457 ORTHO05D009249 3.1e-12 77.0 251 40.6
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 1.5e-11 74.7 143 39.2
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 2.0e-11 74.3 164 36.0
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 2.6e-11 73.9 243 32.1
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 3.4e-11 73.6 225 32.0
AUR62035619 Chenopodium quinoa HOM05D003457 ORTHO05D009249 4.4e-11 73.2 245 33.9
unitig_90.g27506 Utricularia gibba HOM05D003457 ORTHO05D009249 4.4e-11 73.2 167 36.5
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 5.8e-11 72.8 153 39.9
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 1.3e-10 71.6 145 38.6
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 1.7e-10 71.2 143 39.2
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 1.7e-10 71.2 144 38.9
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 2.9e-10 70.5 146 38.4
Sc13g0010260 Simmondsia chinensis HOM05D003457 ORTHO05D009249 8.3e-10 68.9 280 27.9
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 1.1e-09 68.6 161 36.6
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 4.1e-09 66.6 143 37.1
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 9.2e-09 65.5 305 28.9
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 1.7e-07 61.2 199 33.2
ECA233G2997 Erigeron canadensis HOM05D003457 ORTHO05D009249 5.0e-07 59.7 91 46.2
Lalb_Chr08g0239631 Lupinus albus HOM05D003457 ORTHO05D009249 8.6e-07 58.9 135 34.8
CDE01G0392 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 7.3e-06 55.8 198 29.3


User provided reference genes

Program Settings