Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 4.2e-113 411.4 211 100.0
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.7e-101 372.9 211 90.0
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 2.5e-89 332.4 211 79.6
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 1.6e-88 329.7 212 81.1
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 1.1e-87 327.0 211 82.0
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 1.1e-87 327.0 211 82.0
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 5.2e-87 324.7 213 78.9
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 6.8e-87 324.3 211 81.0
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 9.9e-86 320.5 210 76.7
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 1.3e-85 320.1 210 81.0
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 3.2e-84 315.5 210 77.1
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 3.9e-82 308.5 212 77.4
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 6.6e-82 307.8 212 76.4
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 5.6e-81 304.7 212 73.1
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 2.4e-79 299.3 210 77.6
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 5.2e-79 298.1 181 86.2
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 1.2e-78 297.0 213 74.6
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 2.6e-78 295.8 214 74.3
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 2.6e-78 295.8 209 74.2
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 2.6e-78 295.8 205 75.1
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 4.4e-78 295.0 210 71.0
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 4.4e-78 295.0 215 73.0
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 9.9e-78 293.9 208 73.6
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 1.3e-77 293.5 211 70.1
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.7e-77 293.1 215 72.6
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.2e-77 292.7 215 72.6
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 8.4e-77 290.8 213 72.3
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 1.1e-76 290.4 215 72.6
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 1.9e-76 289.7 216 74.1
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 1.9e-76 289.7 215 72.1
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 5.4e-76 288.1 210 73.8
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 6.0e-75 284.6 218 69.7
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 1.7e-74 283.1 217 66.8
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 1.7e-74 283.1 222 69.4
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 1.7e-74 283.1 211 68.7
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 3.9e-74 282.0 215 72.1
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 3.9e-74 282.0 202 71.8
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 3.9e-74 282.0 212 73.1
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 8.7e-74 280.8 212 66.5
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 1.5e-73 280.0 216 66.7
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 1.5e-73 280.0 216 66.7
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 2.5e-73 279.3 207 68.6
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 7.3e-73 277.7 212 71.7
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 9.6e-73 277.3 212 72.6
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 1.6e-72 276.6 212 67.9
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 4.8e-72 275.0 215 69.8
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 4.8e-72 275.0 212 71.7
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 6.2e-72 274.6 211 72.0
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 6.2e-72 274.6 210 71.9
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 6.2e-72 274.6 209 70.8
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 8.1e-72 274.2 218 70.6
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 1.4e-71 273.5 212 71.7
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 1.4e-71 273.5 206 68.4
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 2.4e-71 272.7 208 67.8
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 2.4e-71 272.7 211 68.2
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 3.1e-71 272.3 209 68.4
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 4.0e-71 271.9 212 70.8
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 2.0e-70 269.6 210 71.0
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 2.0e-70 269.6 174 83.3
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 2.6e-70 269.2 202 69.3
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 4.4e-70 268.5 203 69.0
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 5.8e-70 268.1 211 69.2
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 7.6e-70 267.7 218 63.3
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 7.6e-70 267.7 211 67.3
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 9.9e-70 267.3 218 63.3
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 9.9e-70 267.3 218 63.3
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 1.3e-69 266.9 217 64.5
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 1.7e-69 266.5 208 68.8
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 4.9e-69 265.0 209 64.1
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 4.9e-69 265.0 219 64.4
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.1e-68 263.8 217 64.1
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 1.4e-68 263.5 218 62.4
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 1.4e-68 263.5 212 67.9
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 2.4e-68 262.7 218 62.4
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 3.2e-68 262.3 218 62.4
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 3.2e-68 262.3 206 67.5
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 3.2e-68 262.3 206 67.0
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 4.2e-68 261.9 217 64.1
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 7.1e-68 261.2 207 68.1
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 1.2e-67 260.4 217 63.6
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.6e-67 260.0 190 71.1
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 1.6e-67 260.0 214 65.4
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 6.6e-66 254.6 187 70.6
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.1e-65 253.8 210 65.2
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.9e-65 253.1 141 85.8
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 2.1e-64 249.6 201 69.2
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 3.6e-64 248.8 197 69.5
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.4e-63 246.9 215 64.7
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 1.4e-63 246.9 203 61.6
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.5e-62 243.4 225 62.2
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 2.6e-62 242.7 190 69.5
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 7.6e-62 241.1 203 61.1
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 3.9e-58 228.8 125 84.8
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 3.9e-58 228.8 141 78.0
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 2.1e-56 223.0 211 56.9
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 4.2e-52 208.8 140 74.3
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 4.2e-52 208.8 129 76.7
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 3.5e-51 205.7 152 75.0
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 5.0e-45 185.3 154 64.3
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 1.3e-42 177.2 126 66.7
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 2.3e-42 176.4 142 61.3
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 4.3e-41 172.2 126 65.9
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 5.9e-38 161.8 90 85.6
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 1.9e-36 156.8 128 58.6
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 2.5e-36 156.4 131 58.0
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 6.7e-34 148.3 179 50.3
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 8.8e-34 147.9 174 50.6
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 1.7e-32 143.7 209 46.4
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 3.3e-25 119.4 140 53.6
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 2.6e-22 109.8 71 73.2
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 3.0e-18 96.3 115 49.6


User provided reference genes

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