Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0137700 Salix brachista HOM05D000625 ORTHO05D000467 2.2e-163 578.9 307 100.0
Potri.005G181700 Populus trichocarpa HOM05D000625 ORTHO05D000467 2.1e-100 369.8 317 71.0
Sabra02G0062000 Salix brachista HOM05D000625 ORTHO05D000467 3.3e-82 309.3 312 63.5
Potri.002G079200 Populus trichocarpa HOM05D000625 ORTHO05D000467 2.8e-81 306.2 311 61.4
Manes.02G167200 Manihot esculenta HOM05D000625 ORTHO05D000467 1.8e-40 170.6 320 43.1
Thecc.08G131800 Theobroma cacao HOM05D000625 ORTHO05D000467 1.1e-32 144.8 340 39.1
COL.COLO4_06774 Corchorus olitorius HOM05D000625 ORTHO05D000467 1.8e-32 144.1 337 40.1
TWI32G0027 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 5.9e-31 139.0 325 36.9
Duzib093G1661 Durio zibethinus HOM05D000625 ORTHO05D000467 2.5e-29 133.7 348 37.6
QL09p032974 Quercus lobata HOM05D000625 ORTHO05D000467 4.2e-29 132.9 325 40.0
Haze_18002 Corylus avellana HOM05D000625 ORTHO05D000467 9.5e-29 131.7 315 39.4
Cfa018113 Carpinus fangiana HOM05D000625 ORTHO05D000467 2.1e-28 130.6 317 38.5
Atru.chr13.1547 Acer truncatum HOM05D000625 ORTHO05D000467 4.4e-26 122.9 325 36.6
Cpa.g.sc64.141 Carica papaya HOM05D000625 ORTHO05D000467 8.3e-25 118.6 341 38.7
Aa31LG7G5640 Aethionema arabicum HOM05D000625 ORTHO05D000467 2.7e-23 113.6 333 34.8
Thhalv10007304m.g Eutrema salsugineum HOM05D000625 ORTHO05D000467 2.3e-22 110.5 316 37.0
Gohir.A02G109900 Gossypium hirsutum HOM05D000625 ORTHO05D000467 1.5e-21 107.8 338 34.3
AL1G34820 Arabidopsis lyrata HOM05D000625 ORTHO05D000467 3.3e-21 106.7 316 35.8
AT1G21660 Arabidopsis thaliana HOM05D000625 ORTHO05D000467 2.8e-20 103.6 318 36.5
Gohir.D03G069300 Gossypium hirsutum HOM05D000625 ORTHO05D000467 3.0e-19 100.1 340 34.7
Sp1g19200 Schrenkiella parvula HOM05D000625 ORTHO05D000467 3.0e-19 100.1 335 33.4
Gorai.013G109400 Gossypium raimondii HOM05D000625 ORTHO05D000467 4.0e-19 99.8 340 34.7
RcHm_v2.0_Chr6g0296551 Rosa chinensis HOM05D000625 ORTHO05D000467 6.8e-19 99.0 332 33.4
Sed0023790 Sechium edule HOM05D000625 ORTHO05D000467 2.0e-18 97.4 314 32.8
FAN20G2499 Fragaria x ananassa HOM05D000625 ORTHO05D000467 4.4e-18 96.3 320 33.4
THA.LOC104813676 Tarenaya hassleriana HOM05D000625 ORTHO05D000467 4.4e-18 96.3 343 35.6
Prupe.1G490900 Prunus persica HOM05D000625 ORTHO05D000467 2.9e-17 93.6 350 35.4
ClCG08G005970 Citrullus lanatus HOM05D000625 ORTHO05D000467 3.7e-17 93.2 309 33.3
Ciclev10000812m.g Citrus clementina HOM05D000625 ORTHO05D000467 6.4e-17 92.4 304 32.6
MD00G1063400 Malus domestica HOM05D000625 ORTHO05D000467 6.4e-17 92.4 334 33.5
FvH4_2g27690 Fragaria vesca HOM05D000625 ORTHO05D000467 1.8e-16 90.9 337 32.3
FAN24G3040 Fragaria x ananassa HOM05D000625 ORTHO05D000467 2.4e-16 90.5 330 32.7
Nn1g08903 Nelumbo nucifera HOM05D000625 ORTHO05D000467 5.4e-16 89.4 342 33.3
THA.LOC104810253 Tarenaya hassleriana HOM05D000625 ORTHO05D000467 7.0e-16 89.0 334 33.8
FAN27G0862 Fragaria x ananassa HOM05D000625 ORTHO05D000467 1.6e-15 87.8 325 30.8
CANSAT25G1572 Cannabis sativa HOM05D000625 ORTHO05D000467 2.7e-15 87.0 332 32.8
MELO3C010649.2 Cucumis melo HOM05D000625 ORTHO05D000467 4.6e-15 86.3 312 33.0
Nn5g28425 Nelumbo nucifera HOM05D000625 ORTHO05D000467 5.9e-15 85.9 334 31.7
FAN15G1967 Fragaria x ananassa HOM05D000625 ORTHO05D000467 2.3e-14 84.0 329 31.3
BcaB07g32160 Brassica carinata HOM05D000625 ORTHO05D000467 1.1e-13 81.6 308 27.9
CSS0032437 Camellia sinensis var. sinensis HOM05D000625 ORTHO05D000467 1.1e-13 81.6 280 32.9
Ca_16601_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 1.9e-13 80.9 324 31.5
CsaV3_6G034110 Cucumis sativus L. HOM05D000625 ORTHO05D000467 2.5e-13 80.5 305 31.5
Medtr3g088495 Medicago truncatula HOM05D000625 ORTHO05D000467 4.3e-13 79.7 314 29.9
arahy.Tifrunner.gnm1.ann1.W1K5LL Arachis hypogaea HOM05D000625 ORTHO05D000467 2.8e-12 77.0 326 31.6
Carub.0001s2109 Capsella rubella HOM05D000625 ORTHO05D000467 2.8e-12 77.0 325 30.5
arahy.Tifrunner.gnm1.ann1.K3K33Q Arachis hypogaea HOM05D000625 ORTHO05D000467 1.8e-11 74.3 316 31.0
TPR.G13481 Trifolium pratense HOM05D000625 ORTHO05D000467 5.2e-11 72.8 316 32.6
TAR376G0306 Trochodendron aralioides HOM05D000625 ORTHO05D000467 6.8e-11 72.4 220 35.0
Duzib116G0941 Durio zibethinus HOM05D000625 ORTHO05D000467 8.9e-11 72.0 209 35.9
Psat5g080760 Pisum sativum HOM05D000625 ORTHO05D030191 1.2e-10 71.6 303 31.0
Prupe.4G277600 Prunus persica HOM05D000625 ORTHO05D000467 2.0e-10 70.9 212 34.9
CSS0022253 Camellia sinensis var. sinensis HOM05D000625 ORTHO05D000467 5.8e-10 69.3 173 38.2
arahy.Tifrunner.gnm1.ann1.WBP6BL Arachis hypogaea HOM05D000625 ORTHO05D000467 7.5e-10 68.9 203 34.5
A07p14970 Brassica napus HOM05D000625 ORTHO05D000467 9.8e-10 68.6 170 40.0
arahy.Tifrunner.gnm1.ann1.3HMZ7U Arachis hypogaea HOM05D000625 ORTHO05D000467 1.3e-09 68.2 203 34.5
Lj1g0006269 Lotus japonicus HOM05D000625 ORTHO05D000467 1.3e-09 68.2 310 31.9
COL.COLO4_19725 Corchorus olitorius HOM05D000625 ORTHO05D000467 2.9e-09 67.0 341 30.2
Actinidia29483 Actinidia chinensis HOM05D000625 ORTHO05D000467 8.3e-09 65.5 302 31.1
BcaC06g34899 Brassica carinata HOM05D000625 ORTHO05D000467 1.9e-08 64.3 311 32.2
BolC7t42732H Brassica oleracea HOM05D000625 ORTHO05D000467 1.9e-08 64.3 311 32.2
BcaC05g26084 Brassica carinata HOM05D000625 ORTHO05D000467 3.2e-08 63.5 201 32.8
BraA07t29243Z Brassica rapa HOM05D000625 ORTHO05D000467 4.1e-08 63.2 114 43.0
CARHR022010 Cardamine hirsuta HOM05D000625 ORTHO05D000467 7.0e-08 62.4 333 28.2
C07p22020 Brassica napus HOM05D000625 ORTHO05D000467 9.2e-08 62.0 311 31.8
MD15G1135900 Malus domestica HOM05D000625 ORTHO05D000467 1.2e-07 61.6 205 35.1
Lalb_Chr23g0271151 Lupinus albus HOM05D000625 ORTHO05D000467 1.6e-07 61.2 86 50.0
BcaC08g44790 Brassica carinata HOM05D000625 ORTHO05D000467 2.0e-07 60.8 111 40.5
BolC5t30762H Brassica oleracea HOM05D000625 ORTHO05D000467 2.0e-07 60.8 193 31.1
TAR628G1328 Trochodendron aralioides HOM05D000625 ORTHO05D000467 2.0e-07 60.8 303 32.7
BraA06t24866Z Brassica rapa HOM05D000625 ORTHO05D000467 2.7e-07 60.5 103 43.7
Actinidia23136 Actinidia chinensis HOM05D000625 ORTHO05D000467 3.5e-07 60.1 317 27.8
BolC6t37531H Brassica oleracea HOM05D000625 ORTHO05D000467 3.5e-07 60.1 93 43.0
Hund17319 Selenicereus undatus HOM05D000625 ORTHO05D000467 3.5e-07 60.1 129 40.3
Sc02g0005090 Simmondsia chinensis HOM05D000625 ORTHO05D000467 4.6e-07 59.7 153 34.6
HanXRQChr01g0013781 Helianthus annuus HOM05D000625 ORTHO05D000467 7.8e-07 58.9 216 29.2
Dinv14665 Davidia involucrata HOM05D000625 ORTHO05D000467 1.0e-06 58.5 218 33.0
HanXRQChr16g0508381 Helianthus annuus HOM05D000625 ORTHO05D000467 1.0e-06 58.5 296 28.4
MD00G1181300 Malus domestica HOM05D000625 ORTHO05D000467 1.0e-06 58.5 204 29.4
PGR044G1332 Punica granatum HOM05D000625 ORTHO05D000467 1.0e-06 58.5 307 28.0
CDE06G2822 Ceratophyllum demersum HOM05D000625 ORTHO05D004359 1.3e-06 58.2 214 33.6
DCAR_014375 Daucus carota HOM05D000625 ORTHO05D000467 1.3e-06 58.2 196 34.7
Thecc.01G204100 Theobroma cacao HOM05D000625 ORTHO05D000467 3.0e-06 57.0 333 27.3
Lalb_Chr11g0066151 Lupinus albus HOM05D000625 ORTHO05D000467 3.9e-06 56.6 265 26.8
Nitab4.5_0000322g0020 Nicotiana tabacum HOM05D000625 ORTHO05D000467 6.6e-06 55.8 188 34.6


User provided reference genes

Program Settings