Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 3.2e-156 555.1 283 100.0
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.5e-145 519.6 283 93.6
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 8.7e-138 493.8 283 88.0
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 6.9e-127 457.6 283 80.6
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 2.0e-121 439.5 283 79.2
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 1.4e-116 423.3 283 77.7
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 9.4e-116 420.6 277 75.5
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 9.4e-116 420.6 277 75.5
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 2.1e-115 419.5 280 75.4
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 2.7e-115 419.1 284 72.5
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 4.7e-115 418.3 270 77.4
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 6.1e-115 417.9 279 76.0
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 1.4e-114 416.8 274 74.1
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 3.0e-114 415.6 280 75.0
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 3.9e-114 415.2 289 70.9
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 5.2e-114 414.8 283 74.6
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 8.8e-114 414.1 285 71.9
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.5e-113 413.3 284 71.8
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 3.3e-113 412.1 283 73.1
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 7.4e-113 411.0 274 75.9
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 7.4e-113 411.0 283 73.1
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 7.4e-113 411.0 278 72.7
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.3e-112 410.2 282 72.3
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 1.7e-112 409.8 283 73.9
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 3.7e-112 408.7 274 75.2
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 6.3e-112 407.9 283 71.4
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.1e-111 407.1 277 75.1
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 1.4e-111 406.8 266 76.7
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 3.1e-111 405.6 278 71.9
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 3.1e-111 405.6 278 71.9
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 4.1e-111 405.2 278 71.9
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 5.3e-111 404.8 278 71.9
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 5.3e-111 404.8 276 76.4
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 1.6e-110 403.3 269 75.1
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 1.6e-110 403.3 278 71.6
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 5.9e-110 401.4 277 72.6
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 7.7e-110 401.0 279 73.1
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 1.5e-108 396.7 261 75.9
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.9e-108 396.4 274 73.7
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 5.5e-108 394.8 292 69.2
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 9.4e-108 394.0 274 73.7
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 9.4e-108 394.0 274 73.7
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 1.6e-107 393.3 281 69.8
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 1.4e-106 390.2 352 61.9
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 2.0e-105 386.3 278 69.8
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 5.7e-105 384.8 274 71.9
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 2.8e-104 382.5 266 72.6
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 3.7e-104 382.1 278 66.9
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.1e-103 380.6 278 66.9
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 2.4e-103 379.4 273 69.6
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 7.0e-103 377.9 269 70.6
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 1.2e-102 377.1 276 69.6
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 1.6e-102 376.7 282 66.0
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 3.5e-102 375.6 276 67.8
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 4.5e-102 375.2 282 69.9
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 1.0e-101 374.0 275 69.1
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 1.7e-101 373.2 253 73.9
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 2.2e-101 372.9 264 72.0
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 6.5e-101 371.3 275 68.7
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 1.1e-100 370.5 272 69.9
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 3.2e-100 369.0 283 65.7
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 2.7e-99 365.9 261 73.2
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 8.0e-99 364.4 267 71.2
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 1.0e-98 364.0 286 65.0
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 1.4e-98 363.6 275 67.6
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 4.0e-98 362.1 283 65.0
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 1.2e-97 360.5 286 64.3
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 1.5e-97 360.1 277 67.5
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 2.6e-97 359.4 272 68.4
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 5.7e-97 358.2 276 65.9
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 3.7e-96 355.5 293 67.9
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 6.3e-96 354.8 274 66.1
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.4e-95 353.6 280 67.1
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.4e-95 353.6 280 67.1
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.8e-95 353.2 265 67.9
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 3.1e-95 352.4 269 66.5
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 5.4e-95 351.7 293 66.9
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 1.2e-94 350.5 280 66.4
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 2.0e-94 349.7 253 70.4
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 2.0e-94 349.7 274 66.8
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 2.7e-94 349.4 280 66.4
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 4.5e-94 348.6 284 66.5
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.0e-93 347.4 267 63.7
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 1.0e-93 347.4 262 67.9
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 6.5e-93 344.7 262 67.2
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 2.8e-91 339.3 262 65.6
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 8.0e-91 337.8 276 65.9
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 8.6e-85 317.8 276 59.8
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.0e-82 310.8 271 61.6
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.1e-76 290.8 197 73.1
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 9.8e-73 277.7 174 78.2
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 1.7e-69 266.9 178 75.3
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.7e-69 266.9 173 75.7
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 3.0e-69 266.2 178 71.9
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 2.2e-64 250.0 187 69.5
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 3.5e-62 242.7 169 71.6
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 2.8e-59 233.0 280 46.8
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 4.7e-59 232.3 264 49.2
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 7.6e-57 224.9 137 76.6
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 9.2e-55 218.0 174 66.1
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 4.6e-54 215.7 281 43.8
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 5.1e-53 212.2 157 70.7
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.1e-52 211.1 270 45.6
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 2.0e-49 200.3 277 44.8
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 3.0e-45 186.4 231 46.8
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 1.1e-44 184.5 267 43.4
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.5e-41 174.1 275 43.6
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.8e-35 153.3 134 61.2
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 4.6e-30 136.0 280 33.6
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 7.4e-28 128.6 92 65.2
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.8e-27 126.7 78 76.9
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 2.7e-22 110.2 75 69.3
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 6.7e-21 105.5 150 42.0
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 3.3e-20 103.2 76 64.5
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 6.9e-18 95.5 173 39.3
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.9e-15 87.4 65 61.5
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.9e-15 87.4 73 60.3
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.7e-14 83.6 131 38.9
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 2.2e-11 73.9 79 48.1
Manes.02G163600 Manihot esculenta HOM05D006622 ORTHO05D007939 1.2e-06 58.2 44 59.1


User provided reference genes

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