Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0129400 Salix brachista HOM05D005489 ORTHO05D006629 2.3e-75 285.4 141 100.0
Potri.005G171901 Populus trichocarpa HOM05D005489 ORTHO05D006629 1.5e-45 186.4 125 79.2
Sabra02G0070300 Salix brachista HOM05D005489 ORTHO05D006629 1.3e-44 183.3 125 76.8
Potri.002G089300 Populus trichocarpa HOM05D005489 ORTHO05D006629 2.1e-44 182.6 125 78.4
Atru.chr13.1318 Acer truncatum HOM05D005489 ORTHO05D006629 3.7e-44 181.8 137 72.3
Atru.chr13.1362 Acer truncatum HOM05D005489 ORTHO05D006629 3.7e-44 181.8 137 72.3
Manes.18G073000 Manihot esculenta HOM05D005489 ORTHO05D006629 4.8e-44 181.4 125 76.8
Thecc.08G116800 Theobroma cacao HOM05D005489 ORTHO05D006629 4.8e-44 181.4 125 77.6
Dinv26716 Davidia involucrata HOM05D005489 ORTHO05D006629 2.4e-43 179.1 125 76.0
Sed0015736 Sechium edule HOM05D005489 ORTHO05D006629 5.3e-43 177.9 125 75.2
TWI56G0906 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 5.3e-43 177.9 125 75.2
COL.COLO4_32811 Corchorus olitorius HOM05D005489 ORTHO05D006629 6.9e-43 177.6 125 75.2
TWI12G0464 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 6.9e-43 177.6 125 76.0
MELO3C022783.2 Cucumis melo HOM05D005489 ORTHO05D006629 1.2e-42 176.8 125 74.4
Gohir.A02G075000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.2e-42 176.8 132 71.2
Ciclev10002818m.g Citrus clementina HOM05D005489 ORTHO05D006629 1.5e-42 176.4 125 73.6
QL12p035283 Quercus lobata HOM05D005489 ORTHO05D006629 1.5e-42 176.4 125 75.2
Gohir.D02G082100 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.6e-42 175.6 132 70.5
TAR628G1556 Trochodendron aralioides HOM05D005489 ORTHO05D006629 2.6e-42 175.6 132 68.9
Aqoxy5G02479 Aquilegia oxysepala HOM05D005489 ORTHO05D006629 7.6e-42 174.1 125 71.2
CiPaw.05G228700 Carya illinoinensis HOM05D005489 ORTHO05D006629 7.6e-42 174.1 125 72.0
Duzib093G1687 Durio zibethinus HOM05D005489 ORTHO05D006629 7.6e-42 174.1 125 75.2
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla HOM05D005489 ORTHO05D006629 7.6e-42 174.1 125 72.0
FvH4_5g38950 Fragaria vesca HOM05D005489 ORTHO05D006629 1.3e-41 173.3 125 72.8
FAN04G1587 Fragaria x ananassa HOM05D005489 ORTHO05D006629 1.3e-41 173.3 125 72.8
FAN08G2064 Fragaria x ananassa HOM05D005489 ORTHO05D006629 1.3e-41 173.3 125 72.8
FAN18G3455 Fragaria x ananassa HOM05D005489 ORTHO05D006629 1.3e-41 173.3 125 72.8
PGR044G1289 Punica granatum HOM05D005489 ORTHO05D006629 1.3e-41 173.3 125 71.2
Dinv27383 Davidia involucrata HOM05D005489 ORTHO05D006629 2.2e-41 172.6 125 72.8
Cc10_g10440 Coffea canephora HOM05D005489 ORTHO05D006629 2.9e-41 172.2 123 72.4
Gohir.A06G041000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 4.9e-41 171.4 125 70.4
Gohir.D06G041900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 4.9e-41 171.4 125 70.4
Gorai.010G047100 Gossypium raimondii HOM05D005489 ORTHO05D006629 4.9e-41 171.4 125 70.4
Gohir.A01G187700 Gossypium hirsutum HOM05D005489 ORTHO05D006629 6.5e-41 171.0 125 71.2
Duzib041G0073 Durio zibethinus HOM05D005489 ORTHO05D006629 8.4e-41 170.6 132 68.9
MBI06_g01046_MAGBIO Magnolia biondii HOM05D005489 ORTHO05D006629 8.4e-41 170.6 128 68.0
MD15G1359200 Malus domestica HOM05D005489 ORTHO05D006629 8.4e-41 170.6 125 71.2
PSO017G5790 Papaver somniferum HOM05D005489 ORTHO05D006629 8.4e-41 170.6 125 72.8
PSO170G3859 Papaver somniferum HOM05D005489 ORTHO05D006629 8.4e-41 170.6 125 72.8
GSVIVG01008943001 Vitis vinifera HOM05D005489 ORTHO05D006629 8.4e-41 170.6 125 71.2
Aa31LG6G9070 Aethionema arabicum HOM05D005489 ORTHO05D006629 1.1e-40 170.2 124 70.2
RcHm_v2.0_Chr7g0240921 Rosa chinensis HOM05D005489 ORTHO05D006629 1.4e-40 169.9 125 71.2
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 1.9e-40 169.5 124 71.8
TAR197G0004 Trochodendron aralioides HOM05D005489 ORTHO05D006629 1.9e-40 169.5 125 69.6
THA.LOC104806808 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 4.2e-40 168.3 125 68.8
AL1G51120 Arabidopsis lyrata HOM05D005489 ORTHO05D006629 5.5e-40 167.9 125 68.8
AT1G36980 Arabidopsis thaliana HOM05D005489 ORTHO05D006629 5.5e-40 167.9 125 68.8
BcaB03g13640 Brassica carinata HOM05D005489 ORTHO05D006629 5.5e-40 167.9 125 68.8
A05p23180 Brassica napus HOM05D005489 ORTHO05D006629 5.5e-40 167.9 125 68.8
C05p36630 Brassica napus HOM05D005489 ORTHO05D006629 5.5e-40 167.9 125 68.8
BraA05t21185Z Brassica rapa HOM05D005489 ORTHO05D006629 5.5e-40 167.9 125 68.8
Carub.0001s3388 Capsella rubella HOM05D005489 ORTHO05D006629 5.5e-40 167.9 125 68.8
CAN.G255.20 Capsicum annuum HOM05D005489 ORTHO05D006629 5.5e-40 167.9 125 69.6
SGA_v2.0_scaffold118G32436 Striga asiatica HOM05D005489 ORTHO05D006629 5.5e-40 167.9 125 71.2
Nn5g27958 Nelumbo nucifera HOM05D005489 ORTHO05D006629 7.1e-40 167.5 125 68.8
CARHR034780 Cardamine hirsuta HOM05D005489 ORTHO05D006629 9.3e-40 167.2 125 68.8
Sc01g0001550 Simmondsia chinensis HOM05D005489 ORTHO05D006629 9.3e-40 167.2 127 65.4
Nitab4.5_0000051g0120 Nicotiana tabacum HOM05D005489 ORTHO05D006629 1.2e-39 166.8 124 68.5
Nn1g08538 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.6e-39 166.4 125 68.8
Sp1g31180 Schrenkiella parvula HOM05D005489 ORTHO05D006629 1.6e-39 166.4 125 68.0
PGSC0003DMG400027793 Solanum tuberosum HOM05D005489 ORTHO05D006629 1.6e-39 166.4 125 68.8
EL10Ac1g00039 Beta vulgaris HOM05D005489 ORTHO05D006629 2.1e-39 166.0 125 69.6
Glyma.06G108600 Glycine max HOM05D005489 ORTHO05D006629 2.1e-39 166.0 125 71.2
Gorai.002G220400 Gossypium raimondii HOM05D005489 ORTHO05D006629 2.1e-39 166.0 124 69.4
HanXRQChr11g0326271 Helianthus annuus HOM05D005489 ORTHO05D006629 2.1e-39 166.0 125 68.0
Thhalv10005115m.g Eutrema salsugineum HOM05D005489 ORTHO05D006629 2.7e-39 165.6 125 68.0
Glyma.04G253700 Glycine max HOM05D005489 ORTHO05D006629 3.5e-39 165.2 124 71.0
Lsat_1_v5_gn_4_135561 Lactuca sativa HOM05D005489 ORTHO05D006629 3.5e-39 165.2 125 68.8
HanXRQChr09g0260151 Helianthus annuus HOM05D005489 ORTHO05D006629 6.0e-39 164.5 125 68.0
Solyc11g013550.2 Solanum lycopersicum HOM05D005489 ORTHO05D006629 6.0e-39 164.5 125 68.0
Sopen11g008580 Solanum pennellii HOM05D005489 ORTHO05D006629 6.0e-39 164.5 125 68.0
SGA_v2.0_scaffold24G10504 Striga asiatica HOM05D005489 ORTHO05D006629 6.0e-39 164.5 125 68.8
THA.LOC104813132 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 7.9e-39 164.1 125 66.4
Ca_25761_v3 Cicer arietinum L. HOM05D005489 ORTHO05D006629 1.0e-38 163.7 125 69.6
arahy.Tifrunner.gnm1.ann1.204R5H Arachis hypogaea HOM05D005489 ORTHO05D006629 1.3e-38 163.3 125 69.6
arahy.Tifrunner.gnm1.ann1.64ZY3M Arachis hypogaea HOM05D005489 ORTHO05D006629 1.3e-38 163.3 125 69.6
Medtr3g073300 Medicago truncatula HOM05D005489 ORTHO05D006629 1.3e-38 163.3 125 69.6
CDE06G1809 Ceratophyllum demersum HOM05D005489 ORTHO05D006629 1.8e-38 162.9 125 66.4
SalBow1G3581 Salvia bowleyana HOM05D005489 ORTHO05D006629 1.8e-38 162.9 125 67.2
TPR.G32948 Trifolium pratense HOM05D005489 ORTHO05D006629 1.8e-38 162.9 125 68.8
Migut.C01190 Erythranthe guttata HOM05D005489 ORTHO05D006629 2.3e-38 162.5 125 67.2
Gorai.005G092000 Gossypium raimondii HOM05D005489 ORTHO05D006629 2.3e-38 162.5 92 84.8
Rhsim06G0109100 Rhododendron simsii HOM05D005489 ORTHO05D006629 2.3e-38 162.5 124 69.4
Lalb_Chr08g0241711 Lupinus albus HOM05D005489 ORTHO05D006629 3.0e-38 162.2 125 68.0
Prupe.1G506000 Prunus persica HOM05D005489 ORTHO05D006629 3.0e-38 162.2 125 68.0
Psat5g135600 Pisum sativum HOM05D005489 ORTHO05D006629 3.9e-38 161.8 125 68.8
Hund16821 Selenicereus undatus HOM05D005489 ORTHO05D006629 3.9e-38 161.8 134 61.9
MSTRG.1486 Avicennia marina HOM05D005489 ORTHO05D006629 6.7e-38 161.0 125 66.4
Lalb_Chr11g0065701 Lupinus albus HOM05D005489 ORTHO05D006629 8.7e-38 160.6 125 67.2
VMungo1127G1458 Vigna mungo HOM05D005489 ORTHO05D006629 1.1e-37 160.2 125 68.0
Nitab4.5_0002332g0020 Nicotiana tabacum HOM05D005489 ORTHO05D006629 1.9e-37 159.5 119 67.2
Peaxi162Scf01011g00023 Petunia axillaris HOM05D005489 ORTHO05D006629 1.9e-37 159.5 125 67.2
Phvul.011G165300 Phaseolus vulgaris HOM05D005489 ORTHO05D006629 1.9e-37 159.5 125 67.2
DCAR_014792 Daucus carota HOM05D005489 ORTHO05D006629 2.5e-37 159.1 124 65.3
Lj1g0000272 Lotus japonicus HOM05D005489 ORTHO05D006629 4.3e-37 158.3 125 68.8
Gohir.D01G181900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 5.7e-37 157.9 124 67.7
ECA232G0625 Erigeron canadensis HOM05D005489 ORTHO05D006629 1.6e-36 156.4 121 68.6
Migut.N03320 Erythranthe guttata HOM05D005489 ORTHO05D006629 2.8e-36 155.6 125 65.6
Oeu043793.1 Olea europaea HOM05D005489 ORTHO05D006629 3.1e-35 152.1 134 59.7
BolC5t32398H Brassica oleracea HOM05D005489 ORTHO05D006629 3.4e-34 148.7 120 63.3
Oeu032962.1 Olea europaea HOM05D005489 ORTHO05D006629 2.2e-33 146.0 125 61.6
Actinidia29431 Actinidia chinensis HOM05D005489 ORTHO05D006629 3.6e-31 138.7 125 59.2
HPP92_002297 Vanilla planifolia HOM05D005489 ORTHO05D006629 7.9e-31 137.5 130 57.7
HPP92_005944 Vanilla planifolia HOM05D005489 ORTHO05D006629 2.3e-30 136.0 130 56.9
BcaC05g27681 Brassica carinata HOM05D005489 ORTHO05D006629 3.0e-30 135.6 121 62.8
Os02g0566900 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 3.0e-30 135.6 132 55.3
Zm00001eb244520 Zea mays HOM05D005489 ORTHO05D006629 1.5e-29 133.3 134 52.2
Zm00001eb100550 Zea mays HOM05D005489 ORTHO05D006629 1.1e-27 127.1 135 52.6
unitig_747.g21477 Utricularia gibba HOM05D003597 ORTHO05D004420 2.4e-27 125.9 195 42.1
Os09g0453000 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 6.9e-27 124.4 135 51.9
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis HOM05D005489 ORTHO05D006629 9.1e-27 124.0 126 52.4
SMO116G0262 Selaginella moellendorffii HOM05D005489 ORTHO05D006629 1.5e-26 123.2 122 55.7
AUR62004694 Chenopodium quinoa HOM05D005489 ORTHO05D006629 2.0e-26 122.9 141 50.4
SEGI_34511 Sequoiadendron giganteum HOM05D005489 ORTHO05D006629 8.5e-25 117.5 126 51.6
Mapoly0004s0020 Marchantia polymorpha HOM05D005489 ORTHO05D006629 4.2e-24 115.2 83 71.1
Pp3c1_10200 Physcomitrium patens HOM05D005489 ORTHO05D006629 8.8e-22 107.5 127 46.5
Pp3c2_28270 Physcomitrium patens HOM05D005489 ORTHO05D006629 8.8e-22 107.5 127 47.2
ClCG03G009140 Citrullus lanatus HOM05D005489 ORTHO05D006629 1.5e-18 96.7 50 96.0
CBR_g30829 Chara braunii HOM05D005489 ORTHO05D006629 4.5e-18 95.1 119 43.7
Sopen11g008620 Solanum pennellii HOM05D000147 ORTHO05D004360 1.9e-16 89.7 62 74.2
Haze_00523 Corylus avellana HOM05D005489 ORTHO05D006629 4.2e-16 88.6 76 60.5
CANSAT25G2554 Cannabis sativa HOM05D005489 ORTHO05D006629 2.1e-15 86.3 92 51.1
Cfa015959 Carpinus fangiana HOM05D005489 ORTHO05D006629 6.1e-15 84.7 74 59.5
ClCG03G009110 Citrullus lanatus HOM05D005489 ORTHO05D006629 1.0e-14 84.0 74 60.8
CsaV3_5G023520 Cucumis sativus L. HOM05D005489 ORTHO05D006629 1.0e-14 84.0 74 60.8
TAR127G0005 Trochodendron aralioides HOM05D005489 ORTHO05D006629 3.9e-14 82.0 75 54.7
BcaC05g27682 Brassica carinata HOM05D005489 ORTHO05D006629 6.7e-14 81.3 74 55.4
C05p36640 Brassica napus HOM05D005489 ORTHO05D006629 6.7e-14 81.3 74 55.4
DCAR_023128 Daucus carota HOM05D005489 ORTHO05D006629 5.7e-13 78.2 75 53.3
ATR0121G008 Amborella trichopoda HOM05D005489 ORTHO05D006629 2.4e-11 72.8 74 50.0
Solyc11g013660.1 Solanum lycopersicum HOM05D005489 ORTHO05D006629 9.1e-11 70.9 72 54.2
Nn2g15248 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.0e-09 67.4 73 49.3
Cre01.g042950 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 1.2e-07 60.5 92 33.7
PRCOL_00003843 Prasinoderma coloniale HOM05D005489 ORTHO05D006629 1.6e-07 60.1 84 42.9
Os08g0469200 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 3.6e-07 58.9 79 41.8
Oeu050268.1 Olea europaea HOM05D005489 ORTHO05D006629 1.0e-06 57.4 76 44.7


User provided reference genes

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