Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 2.3e-108 395.6 199 100.0
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.9e-83 312.8 199 81.4
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.9e-78 296.2 202 75.7
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 7.9e-61 237.7 178 73.0
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 3.9e-60 235.3 206 68.4
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 1.7e-58 229.9 202 61.4
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 1.1e-57 227.3 202 58.4
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 3.1e-57 225.7 201 59.7
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.5e-56 223.4 205 62.9
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 9.4e-54 214.2 204 56.4
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 7.7e-48 194.5 215 52.6
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.7e-47 193.4 209 53.6
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.7e-47 193.4 211 53.1
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.9e-47 192.6 211 53.1
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.4e-44 183.7 200 52.5
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.3e-44 183.0 209 52.2
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 6.7e-44 181.4 214 47.7
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 1.5e-43 180.3 208 52.9
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 8.2e-42 174.5 205 53.2
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 8.2e-42 174.5 205 53.2
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 1.8e-41 173.3 190 50.5
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 7.0e-41 171.4 189 49.2
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 7.0e-41 171.4 193 49.2
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 6.5e-39 164.9 204 51.0
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.5e-38 162.9 214 48.1
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 1.4e-36 157.1 227 44.5
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.0e-36 156.0 214 47.2
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.0e-36 156.0 214 46.7
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 4.0e-36 155.6 203 48.3
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 1.5e-35 153.7 203 42.4
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 9.8e-35 151.0 215 43.7
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 3.7e-34 149.1 226 40.3
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 4.8e-34 148.7 209 45.0
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.1e-33 147.5 216 44.9
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 1.4e-33 147.1 165 47.3
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 1.8e-33 146.7 193 45.6
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 2.4e-33 146.4 216 44.4
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 3.1e-33 146.0 218 45.4
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 7.0e-33 144.8 190 41.6
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 1.2e-32 144.1 200 46.0
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 1.6e-32 143.7 266 37.2
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 5.9e-32 141.7 213 43.2
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 1.3e-31 140.6 226 38.9
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 2.9e-31 139.4 201 42.8
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 6.5e-31 138.3 214 43.5
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 8.5e-31 137.9 198 47.5
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.2e-30 136.0 218 38.1
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 4.2e-30 135.6 178 46.1
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.5e-30 135.2 205 39.5
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 9.5e-30 134.4 213 41.3
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 2.8e-29 132.9 217 42.4
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 3.6e-29 132.5 207 44.9
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 4.7e-29 132.1 218 37.6
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 8.0e-29 131.3 218 37.2
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.4e-28 130.6 217 37.3
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 1.8e-28 130.2 212 43.9
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 4.0e-28 129.0 237 38.8
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.2e-28 128.6 214 38.3
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 5.2e-28 128.6 171 45.0
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 6.8e-28 128.3 201 40.8
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 6.8e-28 128.3 190 41.1
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 8.8e-28 127.9 212 43.4
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.5e-27 127.1 185 45.9
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 2.0e-27 126.7 180 43.9
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 7.5e-27 124.8 190 40.0
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 9.8e-27 124.4 183 41.5
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 1.3e-26 124.0 191 40.8
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 1.7e-26 123.6 188 41.5
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 8.3e-26 121.3 176 42.0
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 8.3e-26 121.3 228 37.7
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 1.8e-25 120.2 229 38.9
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 2.4e-25 119.8 209 37.8
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.4e-25 119.8 188 41.0
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.7e-23 113.6 195 37.9
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 2.9e-23 112.8 187 43.3
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 3.8e-23 112.5 204 39.7
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 6.6e-23 111.7 184 41.8
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 1.5e-22 110.5 194 37.1
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 2.5e-22 109.8 222 37.4
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 3.3e-22 109.4 234 35.9
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 3.3e-22 109.4 183 39.3
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 4.3e-22 109.0 184 40.2
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 4.3e-22 109.0 184 40.2
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 5.6e-22 108.6 189 38.6
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 5.6e-22 108.6 189 38.6
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 9.5e-22 107.8 200 36.0
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 3.6e-21 105.9 186 39.2
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.4e-20 104.0 140 43.6
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 8.9e-20 101.3 181 38.7
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.2e-19 100.9 192 38.0
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 1.7e-18 97.1 218 32.1
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.9e-18 96.3 188 35.6
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 1.1e-17 94.4 147 41.5
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 4.1e-17 92.4 194 36.6
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 7.3e-14 81.6 183 33.3
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 5.2e-12 75.5 191 35.1
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 6.8e-12 75.1 120 40.0
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 6.4e-10 68.6 203 32.5
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 3.2e-09 66.2 160 33.1
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 7.0e-09 65.1 172 32.0
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 9.2e-09 64.7 165 33.3
Cpa.g.sc828.3 Carica papaya HOM05D007182 ORTHO05D008919 1.0e-07 61.2 59 52.5
Zm00001eb216790 Zea mays HOM05D049283 ORTHO05D049509 3.9e-07 59.3 174 29.9
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 1.1e-06 57.8 186 29.6
Lj7P307T15 Lonicera japonica HOM05D007182 ORTHO05D008919 3.3e-06 56.2 58 44.8
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 5.6e-06 55.5 167 29.3
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 5.6e-06 55.5 167 29.3


User provided reference genes

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