Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0127300 Salix brachista HOM05D004520 ORTHO05D005520 2.6e-192 675.2 351 100.0
Potri.005G169900 Populus trichocarpa HOM05D004520 ORTHO05D005520 2.9e-143 512.3 340 82.4
Manes.02G156700 Manihot esculenta HOM05D004520 ORTHO05D005520 9.1e-60 235.0 366 47.0
CiPaw.05G232100 Carya illinoinensis HOM05D004520 ORTHO05D005520 2.9e-50 203.4 343 39.7
COL.COLO4_16493 Corchorus olitorius HOM05D004520 ORTHO05D005520 9.7e-46 188.3 346 39.3
Thecc.08G113500 Theobroma cacao HOM05D004520 ORTHO05D005520 2.8e-45 186.8 358 42.2
Gorai.009G240500 Gossypium raimondii HOM05D004520 ORTHO05D005520 5.5e-41 172.6 333 39.9
Gohir.D05G232300 Gossypium hirsutum HOM05D004520 ORTHO05D005520 7.2e-41 172.2 333 39.6
Gohir.A05G230000 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.1e-40 170.6 328 39.6
Cpa.g.sc66.103 Carica papaya HOM05D004520 ORTHO05D005520 3.5e-35 153.3 323 37.5
Prupe.1G510300 Prunus persica HOM05D004520 ORTHO05D005520 3.5e-35 153.3 230 44.3
QL12p035728 Quercus lobata HOM05D004520 ORTHO05D005520 5.9e-35 152.5 305 37.4
Ciclev10003675m.g Citrus clementina HOM05D004520 ORTHO05D005520 3.0e-31 140.2 336 38.1
FAN04G0088 Fragaria x ananassa HOM05D004520 ORTHO05D005520 2.6e-30 137.1 257 37.4
FAN13G0916 Fragaria x ananassa HOM05D004520 ORTHO05D005520 7.5e-30 135.6 256 36.3
FAN18G1022 Fragaria x ananassa HOM05D004520 ORTHO05D005520 7.5e-30 135.6 257 37.0
FvH4_5g38160 Fragaria vesca HOM05D004520 ORTHO05D005520 2.2e-29 134.0 257 35.8
MD15G1409900 Malus domestica HOM05D004520 ORTHO05D005520 9.1e-28 128.6 257 37.7
Actinidia10293 Actinidia chinensis HOM05D001087 ORTHO05D005520 5.9e-27 125.9 218 39.9
Dinv44734 Davidia involucrata HOM05D001087 ORTHO05D001846 7.7e-27 125.6 315 34.0
FAN08G0369 Fragaria x ananassa HOM05D004520 ORTHO05D005520 3.8e-26 123.2 207 37.7
Potri.002G092000 Populus trichocarpa HOM05D004520 ORTHO05D005520 4.7e-24 116.3 159 41.5
QL12p035753 Quercus lobata HOM05D004520 ORTHO05D005520 1.8e-23 114.4 176 43.2
Sabra05G0127200 Salix brachista HOM05D004520 ORTHO05D005520 1.8e-23 114.4 142 45.1
Cc00_g24440 Coffea canephora HOM05D004520 ORTHO05D005520 4.0e-23 113.2 118 49.2
Manes.02G156600 Manihot esculenta HOM05D004520 ORTHO05D005520 4.0e-23 113.2 130 49.2
Potri.005G166900 Populus trichocarpa HOM05D004520 ORTHO05D005520 4.0e-23 113.2 166 43.4
Oeu024567.1 Olea europaea HOM05D004520 ORTHO05D005520 5.2e-23 112.8 145 42.1
RcHm_v2.0_Chr7g0240121 Rosa chinensis HOM05D004520 ORTHO05D005520 2.0e-22 110.9 127 44.9
Haze_00561 Corylus avellana HOM05D004520 ORTHO05D005520 2.6e-22 110.5 125 51.2
Prupe.1G510900 Prunus persica HOM05D004520 ORTHO05D005520 4.4e-22 109.8 182 39.0
CsaV3_5G023830 Cucumis sativus L. HOM05D004520 ORTHO05D005520 7.5e-22 109.0 248 35.5
Cfa015929 Carpinus fangiana HOM05D004520 ORTHO05D005520 1.3e-21 108.2 141 46.1
A07p14760 Brassica napus HOM05D004520 ORTHO05D005520 2.2e-21 107.5 212 35.8
C05p21170 Brassica napus HOM05D004520 ORTHO05D005520 2.2e-21 107.5 170 43.5
BolC5t30811H Brassica oleracea HOM05D004520 ORTHO05D005520 2.2e-21 107.5 170 43.5
CiPaw.06G022900 Carya illinoinensis HOM05D004520 ORTHO05D005520 2.2e-21 107.5 130 45.4
FAN18G4472 Fragaria x ananassa HOM05D004520 ORTHO05D005520 2.9e-21 107.1 130 47.7
A09p42670 Brassica napus HOM05D004520 ORTHO05D005520 3.7e-21 106.7 159 44.7
BraA09t39742Z Brassica rapa HOM05D004520 ORTHO05D005520 3.7e-21 106.7 159 44.7
Haze_00560 Corylus avellana HOM05D004520 ORTHO05D005520 3.7e-21 106.7 274 35.0
Haze_00569 Corylus avellana HOM05D004520 ORTHO05D005520 3.7e-21 106.7 274 35.0
FvH4_5g38140 Fragaria vesca HOM05D004520 ORTHO05D000031 3.7e-21 106.7 130 46.9
BcaB03g14234 Brassica carinata HOM05D004520 ORTHO05D005520 6.4e-21 105.9 250 33.6
ClCG03G008900 Citrullus lanatus HOM05D004520 ORTHO05D005520 8.3e-21 105.5 253 32.8
FAN08G3230 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.1e-20 105.1 130 47.7
FAN13G2359 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.1e-20 105.1 174 40.8
BcaB07g32230 Brassica carinata HOM05D004520 ORTHO05D005520 1.4e-20 104.8 198 42.4
BraA07t29221Z Brassica rapa HOM05D004520 ORTHO05D005520 1.4e-20 104.8 217 36.4
BcaC05g26135 Brassica carinata HOM05D004520 ORTHO05D005520 1.8e-20 104.4 160 43.1
MD15G1408400 Malus domestica HOM05D004520 ORTHO05D005520 1.8e-20 104.4 134 43.3
AT1G22110 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 2.4e-20 104.0 212 39.6
MD08G1176500 Malus domestica HOM05D004520 ORTHO05D005520 3.2e-20 103.6 159 39.6
CARHR022460 Cardamine hirsuta HOM05D004520 ORTHO05D005520 4.1e-20 103.2 150 44.0
BcaB03g11898 Brassica carinata HOM05D003425 ORTHO05D003897 5.4e-20 102.8 114 50.9
Carub.0001s2166 Capsella rubella HOM05D004520 ORTHO05D005520 5.4e-20 102.8 142 46.5
AL1G35550 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 7.0e-20 102.4 199 43.7
BolC7t42702H Brassica oleracea HOM05D004520 ORTHO05D005520 7.0e-20 102.4 146 43.8
MD15G1363200 Malus domestica HOM05D004520 ORTHO05D005520 7.0e-20 102.4 149 43.6
Cfa015930 Carpinus fangiana HOM05D004520 ORTHO05D005520 1.2e-19 101.7 269 32.7
Dinv44735 Davidia involucrata HOM05D004520 ORTHO05D005520 1.2e-19 101.7 147 42.9
MBI02_g37831_MAGBIO Magnolia biondii HOM05D004520 ORTHO05D005520 1.2e-19 101.7 79 58.2
MELO3C022817.2 Cucumis melo HOM05D004520 ORTHO05D005520 1.6e-19 101.3 132 45.5
FAN04G1722 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.6e-19 101.3 164 41.5
CiPaw.05G232200 Carya illinoinensis HOM05D004520 ORTHO05D005520 2.0e-19 100.9 207 38.2
Duzib041G0365 Durio zibethinus HOM05D004520 ORTHO05D005520 2.0e-19 100.9 144 43.1
PSO210G7148 Papaver somniferum HOM05D004520 ORTHO05D005520 2.0e-19 100.9 71 63.4
PSO447G0143 Papaver somniferum HOM05D004520 ORTHO05D005520 2.0e-19 100.9 71 63.4
Aa31LG7G6090 Aethionema arabicum HOM05D004520 ORTHO05D005520 3.5e-19 100.1 131 45.0
Duzib041G0092 Durio zibethinus HOM05D004520 ORTHO05D005520 3.5e-19 100.1 164 39.0
COL.COLO4_16491 Corchorus olitorius HOM05D004520 ORTHO05D005520 1.0e-18 98.6 227 32.2
Prupe.1G552400 Prunus persica HOM05D004520 ORTHO05D005520 1.3e-18 98.2 131 45.0
TWI12G0901 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 1.3e-18 98.2 256 33.6
C07p21720 Brassica napus HOM05D004520 ORTHO05D005520 1.7e-18 97.8 146 42.5
Lj1g0026094 Lotus japonicus HOM05D004520 ORTHO05D005520 1.7e-18 97.8 154 40.9
Duzib116G0626 Durio zibethinus HOM05D004520 ORTHO05D005520 2.3e-18 97.4 120 46.7
Dinv13052 Davidia involucrata HOM05D004520 ORTHO05D005520 2.9e-18 97.1 229 31.4
Migut.N02919 Erythranthe guttata HOM05D004520 ORTHO05D005520 3.9e-18 96.7 113 41.6
Lalb_Chr10g0102151 Lupinus albus HOM05D004520 ORTHO05D005520 3.9e-18 96.7 117 43.6
BcaC06g34928 Brassica carinata HOM05D004520 ORTHO05D005520 6.6e-18 95.9 152 41.4
BcaC07g39145 Brassica carinata HOM05D003425 ORTHO05D003897 6.6e-18 95.9 116 47.4
TWI56G1051 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 6.6e-18 95.9 217 36.9
MD08G1219800 Malus domestica HOM05D004520 ORTHO05D005520 1.5e-17 94.7 180 34.4
PGR042G0053 Punica granatum HOM05D004520 ORTHO05D005520 1.5e-17 94.7 169 39.1
Duzib093G1357 Durio zibethinus HOM05D004520 ORTHO05D005520 1.9e-17 94.4 226 29.2
Peaxi162Scf00168g00043 Petunia axillaris HOM05D004520 ORTHO05D005520 1.9e-17 94.4 155 39.4
Gohir.D06G040100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.5e-17 94.0 117 44.4
Manes.18G070900 Manihot esculenta HOM05D004520 ORTHO05D005520 2.5e-17 94.0 148 39.9
BolC8t49777H Brassica oleracea HOM05D004520 ORTHO05D005520 3.3e-17 93.6 208 34.6
Gorai.010G044800 Gossypium raimondii HOM05D004520 ORTHO05D005520 3.3e-17 93.6 136 42.6
CANSAT25G0040 Cannabis sativa HOM05D004520 ORTHO05D005520 4.3e-17 93.2 63 63.5
CANSAT25G0424 Cannabis sativa HOM05D004520 ORTHO05D005520 4.3e-17 93.2 63 63.5
Ca_05234_v3 Cicer arietinum L. HOM05D004520 ORTHO05D005520 5.6e-17 92.8 123 43.9
Gohir.A06G039100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 5.6e-17 92.8 119 43.7
Sed0003147 Sechium edule HOM05D004520 ORTHO05D005520 7.3e-17 92.4 162 40.1
Glyma.14G168100 Glycine max HOM05D004520 ORTHO05D005520 9.5e-17 92.0 113 46.9
CDE10G0363 Ceratophyllum demersum HOM05D004520 ORTHO05D005520 2.1e-16 90.9 121 41.3
Ciclev10003829m.g Citrus clementina HOM05D004520 ORTHO05D005520 2.1e-16 90.9 183 35.5
Thecc.08G113300 Theobroma cacao HOM05D004520 ORTHO05D005520 2.1e-16 90.9 234 30.8
Aqoxy6G00530 Aquilegia oxysepala HOM05D004520 ORTHO05D005520 2.8e-16 90.5 92 53.3
Nitab4.5_0006678g0010 Nicotiana tabacum HOM05D004520 ORTHO05D005520 2.8e-16 90.5 133 42.1
CDE10G1290 Ceratophyllum demersum HOM05D004520 ORTHO05D005520 3.6e-16 90.1 94 48.9
Nitab4.5_0002534g0030 Nicotiana tabacum HOM05D004520 ORTHO05D005520 4.7e-16 89.7 165 35.2
TPR.G39080 Trifolium pratense HOM05D004520 ORTHO05D005520 6.2e-16 89.4 112 43.8
Peaxi162Scf00160g01523 Petunia axillaris HOM05D004520 ORTHO05D005520 1.0e-15 88.6 151 39.1
Psat2g075760 Pisum sativum HOM05D004520 ORTHO05D005520 1.0e-15 88.6 106 44.3
Glyma.13G086100 Glycine max HOM05D004520 ORTHO05D005520 1.4e-15 88.2 81 55.6
arahy.Tifrunner.gnm1.ann1.1581IW Arachis hypogaea HOM05D004520 ORTHO05D005520 1.8e-15 87.8 75 56.0
Phvul.008G170000 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 2.3e-15 87.4 77 54.5
Atru.chr13.1276 Acer truncatum HOM05D004520 ORTHO05D005520 3.1e-15 87.0 61 65.6
arahy.Tifrunner.gnm1.ann1.8K5I59 Arachis hypogaea HOM05D004520 ORTHO05D005520 3.1e-15 87.0 65 58.5
Gohir.A02G075405 Gossypium hirsutum HOM05D004520 ORTHO05D005520 4.0e-15 86.7 116 42.2
Glyma.04G106800 Glycine max HOM05D016564 ORTHO05D019006 6.8e-15 85.9 259 30.9
Medtr5g061650 Medicago truncatula HOM05D004520 ORTHO05D005520 2.0e-14 84.3 135 40.7
Gorai.005G092700 Gossypium raimondii HOM05D004520 ORTHO05D005520 4.4e-14 83.2 117 41.9
PGSC0003DMG400027533 Solanum tuberosum HOM05D004520 ORTHO05D005520 4.4e-14 83.2 77 48.1
ClCG03G008910 Citrullus lanatus HOM05D004520 ORTHO05D005520 7.5e-14 82.4 74 48.6
Gohir.D02G082633 Gossypium hirsutum HOM05D004520 ORTHO05D005520 1.7e-13 81.3 117 41.9
PGSC0003DMG400046169 Solanum tuberosum HOM05D004520 ORTHO05D005520 2.9e-13 80.5 101 39.6
Solyc04g072650.1 Solanum lycopersicum HOM05D004520 ORTHO05D005520 6.4e-13 79.3 75 46.7
SalBow6G4633 Salvia bowleyana HOM05D004520 ORTHO05D005520 1.1e-12 78.6 109 40.4
Sopen04g028850 Solanum pennellii HOM05D004520 ORTHO05D005520 1.1e-12 78.6 77 45.5
Gorai.009G282400 Gossypium raimondii HOM05D004520 ORTHO05D005520 1.4e-12 78.2 103 39.8
Gohir.D05G269800 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.4e-12 77.4 103 39.8
Sed0005622 Sechium edule HOM05D004520 ORTHO05D005520 2.4e-12 77.4 123 39.8
SalBow6G1129 Salvia bowleyana HOM05D004520 ORTHO05D005520 3.2e-12 77.0 109 39.4
ATR0564G398 Amborella trichopoda HOM05D004520 ORTHO05D005520 5.4e-12 76.3 59 59.3
Gohir.A05G268200 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.7e-11 73.9 154 32.5
Migut.C00189 Erythranthe guttata HOM05D004520 ORTHO05D005520 3.5e-11 73.6 120 37.5
Prupe.1G096600 Prunus persica HOM05D004520 ORTHO05D005520 3.5e-11 73.6 74 47.3
SEGI_20648 Sequoiadendron giganteum HOM05D004520 ORTHO05D005520 1.0e-10 72.0 124 35.5
TPR.G28946 Trifolium pratense HOM05D016564 ORTHO05D019006 1.7e-10 71.2 128 39.8
Medtr3g073650 Medicago truncatula HOM05D016564 ORTHO05D019006 1.5e-09 68.2 180 33.9
CAN.G689.16 Capsicum annuum HOM05D004520 ORTHO05D005520 2.5e-09 67.4 92 39.1
VMungo1309G1791 Vigna mungo HOM05D016564 ORTHO05D019006 5.6e-09 66.2 184 31.0
CSS0031359 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 1.6e-08 64.7 131 35.9
Sp1g19610 Schrenkiella parvula HOM05D004520 ORTHO05D005520 1.6e-08 64.7 91 45.1
SGA_v2.0_scaffold315G48386 Striga asiatica HOM05D004520 ORTHO05D005520 2.1e-08 64.3 63 47.6
SalBow7G1906 Salvia bowleyana HOM05D004520 ORTHO05D005520 2.8e-08 63.9 75 41.3
Actinidia10294 Actinidia chinensis HOM05D004520 ORTHO05D005520 3.6e-08 63.5 127 35.4
CAN.G535.13 Capsicum annuum HOM05D004520 ORTHO05D005520 4.7e-08 63.2 52 50.0
TPR.G34 Trifolium pratense HOM05D004520 ORTHO05D005520 4.7e-08 63.2 115 36.5
A08p28610 Brassica napus HOM05D003425 ORTHO05D003897 6.2e-08 62.8 91 41.8
BraA08t34791Z Brassica rapa HOM05D003425 ORTHO05D003897 6.2e-08 62.8 91 41.8
Phvul.009G027400 Phaseolus vulgaris HOM05D016564 ORTHO05D019006 1.1e-07 62.0 205 27.3
Phvul.009G027500 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 1.1e-07 62.0 106 35.8
MELO3C022816.2 Cucumis melo HOM05D004520 ORTHO05D005520 1.8e-07 61.2 107 35.5
CSS0017832 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 4.0e-07 60.1 178 32.0
Ca_26311_v3 Cicer arietinum L. HOM05D016564 ORTHO05D019006 6.8e-07 59.3 144 32.6
Rhsim06G0085800 Rhododendron simsii HOM05D004520 ORTHO05D005520 8.9e-07 58.9 141 31.9
Oeu061390.1 Olea europaea HOM05D004520 ORTHO05D005520 1.5e-06 58.2 53 47.2
TAR381G0361 Trochodendron aralioides HOM05D004520 ORTHO05D005520 1.5e-06 58.2 153 30.7
AL2G38200 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 2.6e-06 57.4 104 36.5
CsaV3_5G023810 Cucumis sativus L. HOM05D004520 ORTHO05D005520 2.6e-06 57.4 107 33.6
C08p21380 Brassica napus HOM05D003425 ORTHO05D003897 3.4e-06 57.0 93 40.9
Peaxi162Scf00040g00012 Petunia axillaris HOM05D004622 ORTHO05D005431 3.4e-06 57.0 131 30.5
CARHR071410 Cardamine hirsuta HOM05D004520 ORTHO05D005520 4.4e-06 56.6 117 35.0
AT1G77932 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 5.8e-06 56.2 76 36.8
Carub.0002s2483 Capsella rubella HOM05D004520 ORTHO05D005520 9.8e-06 55.5 87 37.9


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