Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 1.6e-167 592.8 322 100.0
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 1.6e-167 592.8 322 100.0
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 2.5e-117 426.0 330 77.3
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 4.8e-92 342.0 320 69.1
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 1.4e-78 297.4 329 63.2
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 3.3e-56 223.0 326 51.8
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 5.4e-43 179.1 316 45.9
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 7.1e-43 178.7 313 44.1
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 9.2e-43 178.3 296 46.3
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.6e-42 177.6 317 42.9
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.6e-42 177.6 317 42.3
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.5e-42 176.4 314 41.4
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 4.6e-42 176.0 307 44.3
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 1.7e-41 174.1 311 41.5
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 6.2e-39 165.6 303 44.9
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 6.2e-39 165.6 300 45.7
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 8.1e-39 165.2 296 44.9
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 2.4e-38 163.7 329 43.8
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 6.9e-38 162.2 338 37.3
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.2e-37 161.4 303 44.2
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 1.5e-37 161.0 318 40.3
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 1.5e-37 161.0 311 39.2
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 7.6e-37 158.7 320 40.0
Manes.12G112400 Manihot esculenta HOM05D005407 ORTHO05D006544 1.3e-36 157.9 323 44.3
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 2.2e-36 157.1 318 44.0
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 4.9e-36 156.0 323 44.0
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 4.2e-35 152.9 324 41.7
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 1.6e-34 151.0 314 38.9
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 2.1e-34 150.6 313 39.0
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 2.7e-34 150.2 326 41.7
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 1.7e-33 147.5 303 43.6
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 1.7e-33 147.5 302 41.1
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.9e-33 146.4 335 40.9
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 2.0e-29 134.0 310 40.6
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 2.6e-29 133.7 306 42.2
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 8.4e-28 128.6 324 40.7
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 9.3e-27 125.2 310 38.4
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 1.0e-25 121.7 279 37.3
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 1.0e-25 121.7 293 36.9
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 1.3e-25 121.3 200 45.0
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 3.9e-25 119.8 319 34.5
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 5.1e-25 119.4 255 43.9
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 2.5e-24 117.1 315 39.4
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 3.3e-24 116.7 295 36.9
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 4.3e-24 116.3 345 35.4
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 5.6e-24 115.9 253 44.3
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 7.4e-24 115.5 226 42.0
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 7.4e-24 115.5 237 38.4
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 2.1e-23 114.0 318 37.4
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 2.1e-23 114.0 308 38.6
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 3.6e-23 113.2 292 36.0
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 6.2e-23 112.5 210 38.6
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 6.2e-23 112.5 322 36.3
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 1.1e-22 111.7 303 33.0
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 1.8e-22 110.9 312 37.8
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 2.4e-22 110.5 294 37.1
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 4.0e-22 109.8 287 38.0
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 6.9e-22 109.0 301 35.9
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 1.2e-21 108.2 311 32.5
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 2.6e-21 107.1 320 34.4
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 7.6e-21 105.5 298 37.9
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 7.6e-21 105.5 309 35.6
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 9.9e-21 105.1 224 40.6
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 9.9e-21 105.1 292 31.8
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 2.2e-20 104.0 302 36.8
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 2.9e-20 103.6 309 33.7
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 3.8e-20 103.2 302 36.4
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 3.8e-20 103.2 302 36.4
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 6.4e-20 102.4 315 35.9
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 8.4e-20 102.1 313 35.1
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.1e-19 101.7 295 31.5
Dinv30062 Davidia involucrata HOM05D005407 ORTHO05D006544 2.4e-19 100.5 326 35.9
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 5.5e-19 99.4 315 35.2
Medtr4g095320 Medicago truncatula HOM05D005407 ORTHO05D006544 7.1e-19 99.0 308 35.7
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 1.2e-18 98.2 321 34.3
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.2e-18 98.2 292 31.2
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 6.0e-18 95.9 298 38.6
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 6.0e-18 95.9 296 35.1
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 7.9e-18 95.5 249 31.3
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 1.0e-17 95.1 338 30.5
Lalb_Chr16g0389101 Lupinus albus HOM05D005407 ORTHO05D006544 3.0e-17 93.6 290 31.0
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 3.0e-17 93.6 301 30.6
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 5.1e-17 92.8 276 36.6
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 5.1e-17 92.8 272 33.5
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 1.5e-16 91.3 237 31.6
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 1.9e-16 90.9 264 35.6
TAR376G1145 Trochodendron aralioides HOM05D005407 ORTHO05D006544 4.3e-16 89.7 271 35.8
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 9.6e-16 88.6 311 36.3
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 9.6e-16 88.6 313 35.5
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 1.3e-15 88.2 297 32.7
Peaxi162Scf00365g00076 Petunia axillaris HOM05D005407 ORTHO05D006544 2.1e-15 87.4 279 31.9
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 2.8e-15 87.0 321 33.0
AL8G43980 Arabidopsis lyrata HOM05D005407 ORTHO05D006544 6.2e-15 85.9 215 35.3
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 6.2e-15 85.9 329 31.9
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 3.1e-14 83.6 212 34.0
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 3.1e-14 83.6 212 34.0
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 3.1e-14 83.6 212 34.0
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 3.1e-14 83.6 223 37.7
BraA09t36591Z Brassica rapa HOM05D005407 ORTHO05D006544 4.0e-14 83.2 234 32.1
AT5G67350 Arabidopsis thaliana HOM05D005407 ORTHO05D006544 6.9e-14 82.4 212 34.4
A09p09420 Brassica napus HOM05D005407 ORTHO05D006544 6.9e-14 82.4 205 34.1
Thhalv10005384m.g Eutrema salsugineum HOM05D005407 ORTHO05D006544 9.0e-14 82.0 217 35.0
CDE04G2817 Ceratophyllum demersum HOM05D005407 ORTHO05D006544 2.0e-13 80.9 221 36.2
Sed0011473 Sechium edule HOM05D005407 ORTHO05D006544 2.0e-13 80.9 205 39.5
Sp2g29310 Schrenkiella parvula HOM05D005407 ORTHO05D006544 3.4e-13 80.1 210 34.8
CSS0012811 Camellia sinensis var. sinensis HOM05D005407 ORTHO05D006544 4.5e-13 79.7 320 31.6
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 5.8e-13 79.3 256 32.8
Phvul.003G237500 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 5.8e-13 79.3 313 32.6
unitig_62.g23420 Utricularia gibba HOM05D005407 ORTHO05D006544 7.6e-13 79.0 237 33.8
Carub.0008s2714 Capsella rubella HOM05D005407 ORTHO05D006544 1.0e-12 78.6 198 33.3
Rhsim08G0096100 Rhododendron simsii HOM05D005407 ORTHO05D006544 1.3e-12 78.2 164 40.9
HPP92_007853 Vanilla planifolia HOM05D005407 ORTHO05D006544 2.9e-12 77.0 254 32.7
ClCG02G012410 Citrullus lanatus HOM05D005407 ORTHO05D006544 3.8e-12 76.6 215 37.2
BolC7t42952H Brassica oleracea HOM05D005407 ORTHO05D006544 8.4e-12 75.5 209 34.9
Solyc03g150114.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 1.4e-11 74.7 252 31.0
CARHR280260 Cardamine hirsuta HOM05D005407 ORTHO05D006544 2.5e-11 73.9 209 35.4
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.5e-11 73.9 212 38.2
C09p11100 Brassica napus HOM05D005407 ORTHO05D006544 3.2e-11 73.6 233 32.2
unitig_52.g17607 Utricularia gibba HOM05D005407 ORTHO05D006544 9.3e-11 72.0 250 31.6
BolC9t53999H Brassica oleracea HOM05D005407 ORTHO05D006544 2.7e-10 70.5 233 31.8
Peaxi162Scf00264g00321 Petunia axillaris HOM05D005407 ORTHO05D006544 2.7e-10 70.5 165 34.5
MELO3C020864.2 Cucumis melo HOM05D005407 ORTHO05D006544 6.0e-10 69.3 243 36.2
SGA_v2.0_scaffold143G35780 Striga asiatica HOM05D005407 ORTHO05D006544 7.9e-10 68.9 241 34.9
A07p16540 Brassica napus HOM05D005407 ORTHO05D006544 1.3e-09 68.2 208 33.2
BraA07t29378Z Brassica rapa HOM05D005407 ORTHO05D006544 1.3e-09 68.2 208 33.2
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 2.3e-09 67.4 226 29.6
Migut.H00374 Erythranthe guttata HOM05D005407 ORTHO05D006544 5.1e-09 66.2 217 33.2
BcaB04g20064 Brassica carinata HOM05D005407 ORTHO05D006544 1.5e-08 64.7 217 31.3
BcaC04g23209 Brassica carinata HOM05D005407 ORTHO05D006544 3.3e-08 63.5 233 31.3
Aa31LG1G15900 Aethionema arabicum HOM05D005407 ORTHO05D006544 1.3e-07 61.6 247 27.5
CsaV3_2G016540 Cucumis sativus L. HOM05D005407 ORTHO05D006544 1.6e-07 61.2 268 33.6
vmacro17985 Vaccinium macrocarpon HOM05D005407 ORTHO05D006544 2.8e-07 60.5 120 37.5
ATR0661G396 Amborella trichopoda HOM05D005407 ORTHO05D006544 1.4e-06 58.2 207 30.9
Nitab4.5_0005127g0050 Nicotiana tabacum HOM05D005407 ORTHO05D006544 2.4e-06 57.4 104 39.4
HanXRQChr11g0322471 Helianthus annuus HOM05D005407 ORTHO05D006544 4.1e-06 56.6 121 37.2
Ah.02g125610 Amaranthus hybridus HOM05D005407 ORTHO05D006544 9.0e-06 55.5 183 29.5


User provided reference genes

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