Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 3.8e-283 977.6 537 100.0
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 3.2e-157 559.3 597 62.8
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 2.1e-156 556.6 558 63.3
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 1.4e-147 527.3 517 63.2
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 2.0e-146 523.5 577 58.2
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 1.7e-142 510.4 552 58.7
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 1.0e-139 501.1 559 58.5
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.4e-139 500.7 516 61.8
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 6.7e-139 498.4 573 56.7
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 6.7e-139 498.4 512 62.5
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 4.8e-137 492.3 512 62.9
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 4.8e-137 492.3 573 56.7
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 2.4e-136 490.0 563 58.4
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 1.9e-133 480.3 559 56.0
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 4.2e-133 479.2 529 61.1
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 5.5e-133 478.8 529 60.3
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 7.2e-133 478.4 520 59.6
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 7.2e-133 478.4 525 61.1
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 9.4e-133 478.0 518 58.7
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 2.1e-132 476.9 540 58.0
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.1e-132 476.9 509 60.3
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 3.6e-132 476.1 558 55.7
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 6.1e-132 475.3 532 60.2
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 2.3e-131 473.4 545 56.5
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 8.8e-131 471.5 574 56.3
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 1.1e-130 471.1 562 57.7
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 1.7e-129 467.2 517 58.8
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 8.2e-129 464.9 558 56.3
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 1.1e-128 464.5 577 55.3
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 5.3e-128 462.2 516 57.9
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 2.0e-127 460.3 526 56.7
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.7e-126 457.2 512 57.6
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 2.2e-126 456.8 479 59.9
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 1.1e-125 454.5 526 58.0
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 1.1e-125 454.5 530 56.0
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 7.2e-125 451.8 553 56.2
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 1.6e-124 450.7 444 63.7
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 1.0e-123 448.0 524 54.4
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 1.4e-123 447.6 524 54.4
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 1.8e-123 447.2 526 60.6
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 1.8e-123 447.2 528 58.7
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 2.0e-122 443.7 522 56.7
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 7.5e-122 441.8 509 59.1
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 9.8e-122 441.4 513 56.3
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 9.8e-122 441.4 576 51.6
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 9.8e-122 441.4 530 55.7
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 2.8e-121 439.9 559 54.9
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 1.8e-120 437.2 519 56.5
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 3.1e-120 436.4 529 58.0
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 5.4e-120 435.6 490 59.8
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 9.1e-120 434.9 521 56.0
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 3.5e-119 433.0 557 54.2
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 3.5e-119 433.0 479 57.6
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 7.7e-119 431.8 573 55.7
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 1.0e-118 431.4 521 58.0
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 8.5e-118 428.3 508 58.3
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.9e-117 427.2 507 57.2
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 3.2e-117 426.4 503 58.1
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 1.2e-116 424.5 559 51.5
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 1.2e-116 424.5 559 51.5
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 1.6e-116 424.1 530 55.8
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 2.1e-116 423.7 521 55.9
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 4.7e-116 422.5 514 55.8
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 8.0e-116 421.8 529 55.8
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 5.7e-114 415.6 537 55.9
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 9.8e-114 414.8 508 55.7
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.8e-113 413.3 524 52.9
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 3.7e-113 412.9 470 58.7
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 3.7e-113 412.9 516 53.7
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 8.3e-113 411.8 512 56.2
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 9.2e-112 408.3 470 58.3
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 7.7e-111 405.2 586 50.2
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 2.9e-110 403.3 473 59.0
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 6.6e-110 402.1 497 54.5
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 2.1e-108 397.1 558 49.3
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.4e-107 394.4 490 53.1
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 1.5e-106 391.0 526 53.6
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 4.9e-105 386.0 308 76.3
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 4.9e-105 386.0 534 54.9
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 1.4e-104 384.4 342 69.0
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 2.4e-104 383.6 495 53.5
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 1.6e-103 380.9 400 60.2
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 2.7e-103 380.2 502 51.6
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 1.0e-102 378.3 472 55.3
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 1.1e-101 374.8 346 67.6
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 2.3e-99 367.1 551 49.2
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 2.0e-98 364.0 344 68.6
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 9.8e-98 361.7 324 70.1
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 1.2e-95 354.8 288 71.2
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.0e-95 354.0 401 57.1
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 6.0e-95 352.4 401 56.4
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 3.9e-94 349.7 527 50.1
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 6.6e-94 349.0 391 61.1
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 9.5e-93 345.1 519 47.0
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 2.1e-92 344.0 471 52.2
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 4.7e-92 342.8 400 56.8
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 8.1e-92 342.0 313 69.6
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 8.1e-92 342.0 516 47.1
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 7.1e-88 328.9 408 54.2
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 1.1e-75 288.5 239 70.3
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 3.4e-74 283.5 328 58.2
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 2.2e-73 280.8 254 69.3
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 5.4e-72 276.2 254 68.5
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 3.5e-71 273.5 516 40.7
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 1.5e-69 268.1 337 58.5
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 3.6e-68 263.5 295 60.7
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 1.9e-64 251.1 403 47.1
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.3e-62 244.2 316 54.7
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 5.3e-59 233.0 272 55.5
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 4.5e-58 229.9 494 39.5
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 3.1e-51 207.2 494 38.9
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 2.5e-45 187.6 481 36.6
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 4.1e-43 180.3 371 38.3
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 3.4e-34 150.6 396 40.2
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 4.8e-28 130.2 125 69.6
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 9.1e-27 125.9 67 91.0
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 9.1e-27 125.9 67 92.5
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.2e-26 125.6 137 64.2
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 2.9e-25 120.9 110 66.4
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 3.8e-25 120.6 67 88.1
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 1.1e-24 119.0 67 86.6
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 1.1e-24 119.0 267 34.1
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 1.4e-24 118.6 88 69.3
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 1.9e-24 118.2 73 82.2
VMungo1309G1585 Vigna mungo HOM05D005490 ORTHO05D006606 4.7e-23 113.6 90 67.8
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 2.3e-22 111.3 163 42.9
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 3.9e-22 110.5 490 27.6
VMungo0251G2361 Vigna mungo HOM05D007793 ORTHO05D010104 1.5e-21 108.6 82 69.5
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 6.3e-20 103.2 67 76.1
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 8.2e-20 102.8 66 77.3
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.9e-17 94.4 78 69.2
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 2.1e-15 88.2 92 66.3
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 8.0e-15 86.3 78 67.9
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 8.8e-14 82.8 66 65.2
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 1.3e-12 79.0 50 78.0
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.3e-12 79.0 399 29.1


User provided reference genes

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