Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 0.0e+00 1362.1 708 100.0
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 0.0e+00 1271.9 708 93.2
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 1.9e-311 1072.0 720 77.8
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 3.0e-288 995.0 730 73.0
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 6.7e-288 993.8 721 72.8
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 9.7e-287 989.9 716 74.9
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 5.9e-284 980.7 710 74.5
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 1.0e-280 969.9 711 71.9
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 2.0e-279 965.7 720 72.2
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 1.7e-278 962.6 727 72.1
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 4.1e-277 958.0 712 71.5
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 7.0e-277 957.2 712 71.5
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 7.7e-276 953.7 726 71.2
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 1.0e-275 953.4 714 71.8
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 6.5e-275 950.7 731 70.9
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 7.2e-274 947.2 709 72.5
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 1.6e-273 946.0 719 68.7
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 8.0e-273 943.7 719 69.4
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 3.0e-272 941.8 721 69.5
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 3.4e-271 938.3 709 70.5
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 1.7e-270 936.0 723 71.9
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 2.8e-270 935.3 719 68.6
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 3.7e-270 934.9 729 70.2
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 3.1e-269 931.8 719 68.2
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 4.1e-269 931.4 719 68.0
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 5.4e-269 931.0 718 69.5
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.6e-268 929.5 719 71.2
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 2.0e-268 929.1 717 69.2
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 4.5e-268 927.9 728 68.8
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 5.9e-268 927.5 717 70.7
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 1.3e-267 926.4 719 68.7
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.7e-267 926.0 717 70.2
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 2.2e-267 925.6 721 70.2
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 2.9e-267 925.2 717 68.8
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 2.9e-267 925.2 725 69.0
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 5.0e-267 924.5 719 71.1
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.1e-266 923.3 719 70.9
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 1.4e-264 916.4 725 68.1
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 9.8e-263 910.2 721 68.4
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 1.4e-261 906.4 723 67.6
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 1.6e-260 902.9 737 68.0
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 2.0e-260 902.5 721 68.4
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 4.9e-254 881.3 726 67.2
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.9e-254 881.3 709 67.3
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 6.4e-254 880.9 723 67.1
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.1e-253 880.2 719 66.5
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 2.4e-253 879.0 799 60.8
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 9.2e-253 877.1 712 67.3
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 5.9e-252 874.4 726 66.5
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.0e-251 873.6 721 67.3
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 6.6e-251 870.9 717 67.2
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 3.3e-250 868.6 721 67.0
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 6.2e-249 864.4 635 70.9
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 1.4e-248 863.2 710 66.1
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 6.8e-248 860.9 714 66.5
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.1e-245 853.6 726 65.0
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 7.0e-245 850.9 941 54.1
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 2.8e-241 839.0 730 63.0
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 1.5e-239 833.2 712 63.9
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 4.9e-238 828.2 593 74.0
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.9e-237 826.2 718 63.4
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 7.8e-236 820.8 721 63.0
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 8.6e-235 817.4 718 63.8
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 1.5e-234 816.6 928 53.0
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 7.3e-234 814.3 726 62.1
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 4.7e-233 811.6 756 61.0
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 4.7e-233 811.6 726 62.0
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 6.2e-233 811.2 716 62.0
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 7.6e-231 804.3 707 63.9
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 9.9e-231 803.9 727 62.2
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 4.9e-230 801.6 703 64.6
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 8.4e-230 800.8 724 63.3
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 4.1e-229 798.5 707 62.9
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 5.4e-229 798.1 720 63.9
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 5.4e-229 798.1 724 63.7
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 2.1e-225 786.2 730 61.8
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 6.8e-224 781.2 720 60.4
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 2.0e-223 779.6 716 62.0
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 4.2e-221 771.9 716 59.6
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 2.7e-220 769.2 767 58.5
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 4.6e-220 768.5 707 60.8
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 3.1e-216 755.7 718 57.9
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 4.0e-216 755.4 723 59.6
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 6.4e-214 748.0 733 59.8
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 4.2e-213 745.3 718 58.5
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 5.4e-213 745.0 716 58.2
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 3.5e-212 742.3 722 58.3
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 7.9e-212 741.1 716 58.0
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 2.3e-211 739.6 569 69.2
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 3.9e-211 738.8 719 58.3
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 4.8e-209 731.9 740 56.4
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 4.8e-209 731.9 724 58.1
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 1.2e-207 727.2 750 57.6
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 1.5e-207 726.9 717 57.5
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 4.9e-206 721.8 552 70.3
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 4.2e-205 718.8 618 62.8
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 9.6e-202 707.6 615 62.4
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 2.1e-201 706.4 728 55.6
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 3.2e-197 692.6 729 54.7
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.3e-195 686.4 576 67.2
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 5.3e-192 675.2 717 55.9
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 1.7e-190 670.2 534 65.9
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 2.2e-182 643.3 588 61.6
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 2.8e-169 599.7 588 57.7
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 2.0e-151 540.4 511 59.9
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 4.9e-137 492.7 770 43.0
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 5.2e-131 472.6 790 39.5
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 9.8e-122 441.8 466 57.3
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 4.6e-111 406.4 711 36.8
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 1.6e-100 371.3 297 67.3
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 3.4e-98 363.6 271 68.6
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 6.2e-92 342.8 449 49.4
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 2.3e-78 297.7 425 44.7
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.9e-73 280.8 310 53.9
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 1.6e-63 248.4 198 66.7
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 4.4e-61 240.4 368 44.3
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 2.0e-58 231.5 182 65.4
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 2.4e-51 208.0 288 46.5
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 4.4e-45 187.2 151 69.5
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 2.8e-44 184.5 156 59.0
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.5e-37 162.2 144 61.8
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 2.6e-37 161.4 107 80.4
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 4.4e-37 160.6 97 83.5
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 6.3e-36 156.8 128 71.1
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 8.3e-36 156.4 133 69.2
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 6.1e-31 140.2 127 59.8
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 8.3e-28 129.8 156 49.4
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 4.1e-27 127.5 115 59.1
CAN.G363.39 Capsicum annuum HOM05D005929 ORTHO05D007869 2.3e-09 68.6 135 40.7
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 5.0e-09 67.4 121 37.2
MBI16_g22817_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 3.1e-06 58.2 35 80.0


User provided reference genes

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