Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 0.0e+00 1385.9 687 100.0
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 0.0e+00 1204.5 669 90.0
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 4.5e-188 662.1 686 55.0
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 2.7e-177 626.3 696 48.3
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 1.0e-171 607.8 706 48.7
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 1.3e-171 607.4 682 49.9
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 1.8e-165 587.0 675 48.4
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 2.2e-163 580.1 686 47.8
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.0e-160 571.2 683 48.2
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 3.0e-160 569.7 682 48.5
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 5.2e-160 568.9 686 48.1
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 7.5e-159 565.1 675 47.4
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 7.5e-159 565.1 681 48.2
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 7.5e-159 565.1 608 49.5
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 4.1e-157 559.3 685 47.4
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 1.3e-155 554.3 714 45.4
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 1.9e-154 550.4 694 47.1
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 4.2e-154 549.3 716 45.8
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 3.7e-150 536.2 672 47.0
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 3.5e-148 529.6 683 44.8
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 5.9e-148 528.9 703 46.1
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 1.0e-147 528.1 676 45.9
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 7.3e-146 521.9 675 45.9
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 2.1e-145 520.4 675 45.6
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 4.7e-145 519.2 675 45.5
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 1.5e-143 514.2 686 44.8
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 2.2e-142 510.4 614 46.1
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 1.1e-141 508.1 687 43.8
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 3.2e-141 506.5 686 43.6
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 3.2e-141 506.5 676 45.1
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 1.1e-138 498.0 679 42.6
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 1.2e-137 494.6 687 43.1
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 2.1e-137 493.8 688 42.2
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 5.2e-136 489.2 682 40.2
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 6.8e-136 488.8 680 41.2
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 1.7e-134 484.2 681 41.9
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 2.1e-132 477.2 690 40.9
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 3.5e-132 476.5 610 44.8
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 1.7e-126 457.6 668 41.3
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 3.7e-126 456.4 576 45.1
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 4.9e-126 456.1 680 40.6
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 6.4e-126 455.7 679 39.0
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 1.2e-124 451.4 542 48.2
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 5.1e-123 446.0 666 41.6
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 1.1e-122 444.9 678 43.1
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 1.1e-122 444.9 683 41.0
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 3.3e-122 443.4 682 41.3
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 1.2e-121 441.4 688 40.7
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 2.4e-120 437.2 691 38.8
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 3.4e-119 433.3 709 39.4
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 8.4e-118 428.7 728 39.0
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 1.9e-117 427.6 672 39.0
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 3.5e-116 423.3 681 38.6
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 3.0e-115 420.2 696 38.8
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 3.3e-114 416.8 656 39.5
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 7.3e-114 415.6 701 38.8
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 9.6e-114 415.2 669 38.6
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 1.3e-113 414.8 579 43.2
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 8.1e-113 412.1 651 39.5
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 1.1e-112 411.8 672 38.5
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 1.4e-112 411.4 683 38.9
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 4.0e-112 409.8 670 38.7
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 1.2e-111 408.3 559 43.8
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 1.5e-111 407.9 691 37.6
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 4.4e-111 406.4 654 38.7
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 2.2e-110 404.1 645 38.3
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 8.4e-110 402.1 689 37.7
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 2.7e-108 397.1 686 37.3
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 3.5e-108 396.7 647 37.9
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 3.0e-107 393.7 594 40.4
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 8.7e-107 392.1 645 39.8
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 2.5e-106 390.6 654 38.2
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 5.6e-106 389.4 685 36.1
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 2.6e-103 380.6 702 36.9
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 2.6e-103 380.6 593 40.6
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 2.1e-100 370.9 685 35.9
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 2.3e-99 367.5 735 35.5
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 3.9e-99 366.7 433 46.9
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 5.1e-99 366.3 633 37.1
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 4.3e-98 363.2 588 39.8
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 1.6e-97 361.3 693 35.9
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 1.4e-96 358.2 671 36.5
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 1.2e-92 345.1 562 38.1
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 3.3e-90 337.0 501 40.5
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 4.5e-87 326.6 677 34.0
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 2.2e-86 324.3 568 37.9
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 4.8e-81 306.6 682 34.0
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 6.5e-78 296.2 682 31.8
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 1.2e-76 292.0 431 40.4
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 2.1e-76 291.2 427 39.8
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 7.4e-74 282.7 696 31.5
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 3.2e-69 267.3 433 40.0
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 1.6e-68 265.0 360 42.5
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 5.7e-66 256.5 666 30.9
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 1.7e-65 255.0 716 31.6
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 4.8e-65 253.4 687 30.9
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 2.4e-64 251.1 687 30.7
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 2.9e-62 244.2 325 43.7
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 4.8e-57 226.9 331 43.8
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 2.0e-55 221.5 373 37.8
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 3.4e-42 177.6 353 35.4
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.9e-38 164.5 196 49.5
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 2.3e-30 138.3 196 40.8
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 3.3e-29 134.4 139 51.8
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 3.4e-26 124.4 140 45.7
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 8.3e-17 93.2 76 59.2
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 8.3e-17 93.2 76 59.2
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 1.9e-16 92.0 223 32.7
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 1.6e-15 89.0 366 27.3
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 1.1e-13 82.8 99 50.5
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 1.2e-12 79.3 342 24.3
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 6.8e-11 73.6 474 25.7
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 1.5e-10 72.4 690 21.2
AagrBONN_evm.TU.Sc2ySwM_117.3678 Anthoceros agrestis HOM05D039764 ORTHO05D031174 1.9e-08 65.5 473 23.5
SEGI_32623 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 3.2e-08 64.7 269 25.7
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 1.3e-06 59.3 34 76.5


User provided reference genes

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