Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 1.5e-121 439.5 215 100.0
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 1.0e-85 320.5 178 89.3
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 1.9e-84 316.2 178 88.8
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 1.4e-82 310.1 159 93.7
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 5.2e-82 308.1 192 77.1
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 1.1e-81 307.0 159 92.5
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.5e-81 306.6 194 77.3
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 1.5e-81 306.6 159 92.5
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 2.0e-81 306.2 159 89.9
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 4.4e-81 305.1 159 91.8
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 4.4e-81 305.1 159 91.8
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 9.7e-81 303.9 159 91.2
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 2.2e-80 302.8 159 90.6
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 2.8e-80 302.4 159 89.9
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 1.1e-79 300.4 159 89.3
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 1.8e-79 299.7 159 89.9
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 1.8e-79 299.7 160 90.6
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 2.4e-79 299.3 159 89.9
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 4.1e-79 298.5 156 90.4
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 5.3e-79 298.1 182 80.2
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 7.0e-79 297.7 183 79.8
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 9.1e-79 297.4 159 88.1
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 9.1e-79 297.4 159 89.3
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 1.2e-78 297.0 156 90.4
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 2.0e-78 296.2 178 80.3
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 2.7e-78 295.8 159 89.3
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 2.7e-78 295.8 175 82.3
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 3.5e-78 295.4 159 88.7
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 4.5e-78 295.0 159 88.1
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 7.7e-78 294.3 159 88.7
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 1.3e-77 293.5 159 88.1
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 1.7e-77 293.1 159 86.8
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 1.7e-77 293.1 159 87.4
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.2e-77 292.7 192 75.5
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 2.9e-77 292.4 159 88.1
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 3.8e-77 292.0 159 86.8
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 5.0e-77 291.6 156 87.8
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 5.0e-77 291.6 159 88.1
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 6.5e-77 291.2 159 86.2
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 8.5e-77 290.8 159 86.2
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 8.5e-77 290.8 175 81.1
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 1.1e-76 290.4 159 86.8
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 1.1e-76 290.4 156 88.5
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 1.1e-76 290.4 159 86.8
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 1.1e-76 290.4 159 86.8
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 1.1e-76 290.4 159 86.2
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 1.5e-76 290.0 159 86.8
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 1.5e-76 290.0 159 86.8
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 1.9e-76 289.7 159 86.2
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 5.5e-76 288.1 159 85.5
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 7.2e-76 287.7 181 77.3
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 7.2e-76 287.7 159 84.9
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 7.2e-76 287.7 159 84.9
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 9.4e-76 287.3 156 87.2
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 1.6e-75 286.6 159 86.2
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 2.1e-75 286.2 159 85.5
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 2.7e-75 285.8 178 77.5
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 2.7e-75 285.8 159 86.2
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 3.6e-75 285.4 156 84.6
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 3.6e-75 285.4 156 84.6
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 3.6e-75 285.4 159 84.3
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 3.6e-75 285.4 159 84.9
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 6.1e-75 284.6 156 85.9
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 6.1e-75 284.6 156 85.9
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 1.0e-74 283.9 156 85.9
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 1.4e-74 283.5 185 76.2
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 1.4e-74 283.5 159 86.8
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 1.4e-74 283.5 156 86.5
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 1.8e-74 283.1 159 82.4
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 3.0e-74 282.3 159 82.4
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 3.0e-74 282.3 159 82.4
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 3.0e-74 282.3 159 82.4
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 5.2e-74 281.6 160 85.0
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 1.2e-73 280.4 159 81.8
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 1.2e-73 280.4 159 83.6
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 1.2e-73 280.4 159 83.6
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 1.5e-73 280.0 156 84.0
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 2.0e-73 279.6 156 83.3
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 3.4e-73 278.9 159 81.8
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 3.4e-73 278.9 159 81.1
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 5.7e-73 278.1 159 81.8
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 2.8e-72 275.8 159 83.6
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 4.8e-72 275.0 159 81.8
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 8.3e-72 274.2 156 85.3
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 3.1e-71 272.3 159 81.1
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.1e-71 271.9 176 75.6
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 1.6e-70 270.0 156 83.3
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 2.0e-70 269.6 159 81.8
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 2.0e-70 269.6 159 81.8
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 3.5e-70 268.9 213 66.7
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 3.5e-70 268.9 198 69.2
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 1.5e-68 263.5 159 80.5
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 2.7e-67 259.2 139 88.5
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.8e-66 256.5 159 78.0
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 2.3e-66 256.1 130 92.3
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 2.3e-66 256.1 166 74.7
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 8.8e-66 254.2 151 78.8
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 1.5e-65 253.4 143 82.5
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 1.8e-63 246.5 175 71.4
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 9.2e-63 244.2 130 84.6
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 3.5e-62 242.3 143 78.3
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 1.1e-60 237.3 158 72.2
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 3.4e-57 225.7 133 82.7
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 5.4e-55 218.4 121 81.8
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 5.2e-50 201.8 136 68.4
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 8.9e-50 201.1 100 94.0
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 4.4e-49 198.7 132 75.0
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.4e-47 193.7 193 56.0
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 3.2e-47 192.6 139 64.0
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 3.2e-47 192.6 156 64.1
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 3.2e-47 192.6 136 64.7
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 7.0e-47 191.4 136 65.4
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 1.0e-45 187.6 160 61.9
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 2.1e-43 179.9 140 60.0
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 6.2e-43 178.3 142 58.5
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 1.8e-42 176.8 108 75.0
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 7.1e-39 164.9 132 57.6
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 3.5e-38 162.5 112 64.3
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 8.1e-35 151.4 78 89.7
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 8.4e-32 141.4 110 53.6
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 4.6e-30 135.6 135 54.8
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 7.8e-30 134.8 135 54.8
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 9.6e-28 127.9 135 54.8
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.1e-27 126.7 181 47.0
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 4.9e-24 115.5 126 48.4
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.3e-21 107.5 70 71.4
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.3e-21 106.7 135 46.7
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 6.6e-21 105.1 123 48.8
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.3e-20 102.8 150 45.3
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 7.6e-17 91.7 57 71.9
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 7.6e-17 91.7 53 83.0
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 3.8e-16 89.4 50 86.0
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 2.7e-14 83.2 57 64.9
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 2.0e-09 67.0 33 84.8
MBI16_g04464_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.5e-07 58.9 102 36.3


User provided reference genes

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