Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0099100 Salix brachista HOM05D008143 ORTHO05D010256 9.8e-81 303.5 166 100.0
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 2.5e-15 86.3 60 93.3
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 4.2e-15 85.5 66 83.3
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 1.0e-13 80.9 60 90.0
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 2.5e-12 76.3 60 68.3
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 1.7e-11 73.6 60 65.0
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 3.7e-11 72.4 60 70.0
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 1.1e-10 70.9 60 75.0
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 6.9e-10 68.2 60 75.0
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 6.9e-10 68.2 55 69.1
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 6.9e-10 68.2 60 75.0
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 6.9e-10 68.2 60 58.3
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 6.9e-10 68.2 60 58.3
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 9.1e-10 67.8 57 59.6
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 9.1e-10 67.8 67 56.7
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 9.1e-10 67.8 60 60.0
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 1.5e-09 67.0 60 73.3
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 1.5e-09 67.0 61 60.7
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 2.6e-09 66.2 60 58.3
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 2.6e-09 66.2 60 71.7
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 2.6e-09 66.2 60 71.7
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 3.4e-09 65.9 67 58.2
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 3.4e-09 65.9 67 55.2
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 4.5e-09 65.5 57 61.4
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 2.9e-08 62.8 61 57.4
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 2.9e-08 62.8 61 57.4
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 2.9e-08 62.8 56 71.4
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 3.8e-08 62.4 57 59.6
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 3.8e-08 62.4 61 68.9
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 5.0e-08 62.0 58 56.9
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 5.0e-08 62.0 58 56.9
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 6.5e-08 61.6 74 51.4
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 6.5e-08 61.6 59 64.4
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 8.5e-08 61.2 64 53.1
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 8.5e-08 61.2 56 58.9
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 8.5e-08 61.2 55 60.0
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 8.5e-08 61.2 60 68.3
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 1.1e-07 60.8 64 50.0
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 1.1e-07 60.8 57 59.6
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 2.5e-07 59.7 60 55.0
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 2.5e-07 59.7 60 51.7
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 2.5e-07 59.7 87 47.1
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 3.2e-07 59.3 60 58.3
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 3.2e-07 59.3 57 56.1
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 3.2e-07 59.3 60 65.0
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 3.2e-07 59.3 60 53.3
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 3.2e-07 59.3 64 62.5
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 5.5e-07 58.5 57 56.1
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 5.5e-07 58.5 57 56.1
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 5.5e-07 58.5 57 56.1
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 1.2e-06 57.4 57 59.6
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 1.2e-06 57.4 60 53.3
VMungo1080G1030 Vigna mungo HOM05D008143 ORTHO05D010256 2.7e-06 56.2 36 77.8
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 2.7e-06 56.2 58 55.2
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 3.6e-06 55.8 67 52.2
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 3.6e-06 55.8 53 58.5
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 4.7e-06 55.5 57 52.6
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 6.1e-06 55.1 67 49.3
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 7.9e-06 54.7 60 50.0
Rhsim01G0146400 Rhododendron simsii HOM05D002374 ORTHO05D010256 7.9e-06 54.7 36 77.8


User provided reference genes

Program Settings