Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 4.0e-114 414.8 221 100.0
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 1.6e-102 376.3 221 92.3
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.9e-84 316.2 224 76.8
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 4.5e-81 305.1 221 76.5
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.7e-80 303.1 223 73.5
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 1.4e-79 300.1 222 73.4
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 3.2e-79 298.9 221 73.8
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 5.5e-79 298.1 243 70.4
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 2.1e-78 296.2 226 73.0
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 7.9e-78 294.3 221 72.4
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 7.9e-78 294.3 221 72.4
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 5.1e-77 291.6 222 72.5
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.6e-76 289.3 222 70.7
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 3.3e-76 288.9 223 72.2
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 5.7e-76 288.1 221 71.9
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.3e-75 287.0 221 70.6
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.2e-75 286.2 223 70.0
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 2.8e-75 285.8 222 74.3
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 2.8e-75 285.8 221 68.3
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 3.7e-75 285.4 222 69.8
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 6.3e-75 284.6 223 70.4
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 1.5e-73 280.0 221 71.0
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.5e-73 280.0 222 67.6
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 5.9e-73 278.1 221 69.2
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 7.7e-73 277.7 221 69.7
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.4e-71 273.5 223 69.1
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 1.4e-71 273.5 223 68.2
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.4e-71 273.5 221 68.8
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 1.9e-71 273.1 221 67.0
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 3.2e-71 272.3 221 67.0
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 5.5e-71 271.6 226 65.5
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 7.2e-71 271.2 229 68.6
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 1.2e-70 270.4 233 65.2
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 1.6e-70 270.0 222 67.1
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.6e-70 270.0 231 67.5
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 2.1e-70 269.6 223 67.3
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 2.1e-70 269.6 241 65.1
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 1.4e-69 266.9 221 66.5
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 3.9e-69 265.4 230 67.4
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 5.2e-69 265.0 197 69.5
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 6.7e-69 264.6 228 67.5
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 8.8e-69 264.2 155 85.2
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 1.5e-68 263.5 229 64.6
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.0e-68 263.1 221 67.4
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 2.0e-68 263.1 201 70.1
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.3e-67 260.4 230 63.5
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 2.2e-67 259.6 149 85.9
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 4.8e-67 258.5 222 63.5
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.1e-66 257.3 228 65.8
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.8e-66 256.5 224 64.7
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 4.1e-66 255.4 205 65.4
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 7.0e-66 254.6 221 65.2
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.2e-65 253.8 149 83.9
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.2e-65 253.8 222 63.1
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 2.0e-65 253.1 223 64.6
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 2.6e-65 252.7 194 68.6
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 2.6e-65 252.7 147 83.7
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 7.7e-65 251.1 222 63.5
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.2e-64 249.6 201 69.2
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 6.5e-64 248.1 225 64.0
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 8.5e-64 247.7 203 63.5
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 3.2e-63 245.7 203 66.5
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 4.2e-63 245.4 221 61.5
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 9.4e-63 244.2 152 79.6
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 9.4e-63 244.2 224 62.1
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 1.6e-62 243.4 221 62.9
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 2.7e-62 242.7 221 61.5
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 4.7e-62 241.9 221 61.5
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.8e-61 240.0 224 64.3
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 3.0e-61 239.2 150 79.3
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 4.0e-61 238.8 201 68.2
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 8.8e-61 237.7 221 65.2
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.0e-60 236.5 223 63.7
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 2.0e-60 236.5 158 75.9
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 1.3e-59 233.8 221 58.8
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 1.7e-59 233.4 152 77.0
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.8e-59 232.6 151 79.5
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.4e-58 230.3 180 72.2
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.8e-58 229.9 222 59.5
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 9.1e-58 227.6 199 62.8
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 1.2e-57 227.3 202 65.3
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 2.0e-57 226.5 223 58.3
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 7.7e-57 224.6 225 59.1
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 7.7e-57 224.6 221 60.2
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.0e-56 224.2 226 59.3
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 2.2e-56 223.0 227 59.9
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 2.9e-56 222.6 223 57.8
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 2.9e-56 222.6 223 57.8
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.9e-56 222.6 221 59.3
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 8.5e-56 221.1 225 56.9
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.9e-55 219.9 226 57.1
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 9.4e-55 217.6 233 56.2
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 9.4e-55 217.6 128 81.2
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 4.0e-53 212.2 186 60.8
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 2.6e-52 209.5 135 72.6
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 9.8e-52 207.6 243 55.1
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.6e-49 200.3 156 60.9
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 1.6e-49 200.3 109 91.7
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 4.5e-49 198.7 199 51.8
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 2.7e-46 189.5 108 85.2
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 3.0e-45 186.0 167 58.1
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 8.8e-45 184.5 182 60.4
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 6.3e-43 178.3 110 81.8
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 1.6e-41 173.7 156 64.7
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 2.9e-40 169.5 156 60.9
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.5e-39 167.2 163 60.1
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 7.0e-34 148.3 170 54.7
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 1.2e-33 147.5 101 70.3
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 7.8e-33 144.8 157 58.0
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 3.3e-31 139.4 72 93.1
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 3.7e-27 125.9 147 43.5
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 2.1e-22 110.2 68 77.9
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 2.1e-22 110.2 68 77.9
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 4.0e-21 105.9 111 55.0
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 2.3e-16 90.1 58 70.7
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.2e-14 84.3 52 78.8
HPP92_025903 Vanilla planifolia HOM05D006610 ORTHO05D008447 2.1e-06 57.0 38 68.4


User provided reference genes

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