Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 1.0e-210 736.5 374 100.0
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 4.5e-198 694.5 375 93.3
Dinv40154 Davidia involucrata HOM05D005912 ORTHO05D007329 8.8e-138 494.2 377 66.8
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 9.8e-137 490.7 375 68.3
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 1.1e-132 477.2 383 65.3
Manes.01G152000 Manihot esculenta HOM05D005912 ORTHO05D007329 1.2e-131 473.8 350 70.0
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 1.6e-131 473.4 383 64.5
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 2.1e-131 473.0 370 65.7
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 5.7e-129 464.9 352 67.0
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 9.8e-129 464.2 373 65.1
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 1.7e-128 463.4 373 65.1
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 2.2e-128 463.0 374 65.5
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 2.8e-128 462.6 373 64.9
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 2.8e-128 462.6 379 62.5
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 9.2e-127 457.6 371 65.5
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 2.7e-126 456.1 384 63.3
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 1.0e-125 454.1 373 63.8
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 1.3e-125 453.8 327 70.0
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 2.9e-125 452.6 300 73.0
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 1.5e-124 450.3 378 63.2
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 4.7e-123 445.3 376 64.6
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 3.0e-122 442.6 379 59.9
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 1.2e-121 440.7 372 60.8
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 3.4e-121 439.1 370 62.4
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 4.4e-121 438.7 368 61.1
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 1.3e-120 437.2 352 63.9
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 3.7e-120 435.6 371 63.6
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 8.3e-120 434.5 378 62.7
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 1.9e-119 433.3 323 68.4
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 4.1e-119 432.2 376 62.8
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 5.4e-119 431.8 369 63.4
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 1.2e-118 430.6 369 63.4
THA.LOC104807519 Tarenaya hassleriana HOM05D005912 ORTHO05D007329 2.7e-118 429.5 386 58.5
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 3.9e-117 425.6 309 69.3
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 3.9e-117 425.6 369 59.1
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 3.9e-117 425.6 325 66.5
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 1.1e-116 424.1 368 58.7
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 2.5e-116 422.9 322 66.1
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 7.3e-116 421.4 307 68.4
Thhalv10025477m.g Eutrema salsugineum HOM05D005912 ORTHO05D007329 7.3e-116 421.4 375 57.9
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 2.1e-115 419.9 292 69.5
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 6.2e-115 418.3 365 59.5
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 1.1e-114 417.5 373 57.6
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 2.3e-114 416.4 374 59.1
Carub.0007s0449 Capsella rubella HOM05D005912 ORTHO05D007329 5.2e-114 415.2 377 56.5
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 6.8e-114 414.8 343 62.1
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 6.8e-114 414.8 291 69.1
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 1.5e-113 413.7 317 66.6
Sp7g33520 Schrenkiella parvula HOM05D005912 ORTHO05D007329 2.0e-113 413.3 375 56.5
CARHR244100 Cardamine hirsuta HOM05D005912 ORTHO05D007329 9.8e-113 411.0 375 56.0
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 9.8e-113 411.0 355 59.4
Sc07g0001240 Simmondsia chinensis HOM05D005912 ORTHO05D007329 9.8e-113 411.0 369 57.7
BolC1t00315H Brassica oleracea HOM05D005912 ORTHO05D007329 1.3e-112 410.6 370 56.2
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 1.7e-112 410.2 374 57.8
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 2.2e-112 409.8 310 67.7
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 2.9e-112 409.5 365 58.9
A01p02950 Brassica napus HOM05D005912 ORTHO05D007329 3.7e-112 409.1 310 62.6
C01p03300 Brassica napus HOM05D005912 ORTHO05D007329 3.7e-112 409.1 314 61.8
BraA01t00278Z Brassica rapa HOM05D005912 ORTHO05D007329 3.7e-112 409.1 310 62.6
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 3.7e-112 409.1 368 58.7
Ah.11g045130 Amaranthus hybridus HOM05D005912 ORTHO05D007329 4.9e-112 408.7 375 57.6
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 4.9e-112 408.7 377 59.7
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 6.4e-112 408.3 408 54.9
AUR62029896 Chenopodium quinoa HOM05D005912 ORTHO05D007329 6.4e-112 408.3 369 56.6
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 8.3e-112 407.9 374 57.5
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 3.2e-111 406.0 374 57.2
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 5.4e-111 405.2 312 67.3
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 2.7e-110 402.9 413 54.2
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 3.5e-110 402.5 326 63.8
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 3.5e-110 402.5 326 63.8
EL10Ac5g11470 Beta vulgaris HOM05D005912 ORTHO05D007329 3.0e-109 399.4 332 61.1
ATR0661G434 Amborella trichopoda HOM05D005912 ORTHO05D007329 8.6e-109 397.9 307 63.2
BraA08t34122Z Brassica rapa HOM05D005912 ORTHO05D007329 3.4e-105 386.0 283 65.0
Lsat_1_v5_gn_2_75281 Lactuca sativa HOM05D005912 ORTHO05D007329 5.8e-105 385.2 387 53.5
Migut.L00742 Erythranthe guttata HOM05D005912 ORTHO05D007329 2.2e-104 383.3 339 56.6
Os03g0131500 Oryza sativa ssp. japonica HOM05D005912 ORTHO05D007329 2.2e-104 383.3 340 57.6
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 3.7e-104 382.5 378 53.4
Lalb_Chr05g0212091 Lupinus albus HOM05D005912 ORTHO05D007329 3.7e-104 382.5 320 61.6
MSTRG.2738 Avicennia marina HOM05D005912 ORTHO05D007329 1.9e-103 380.2 385 53.0
CDE06G1293 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 3.5e-102 375.9 315 58.4
Zm00001eb002560 Zea mays HOM05D005912 ORTHO05D007329 7.8e-102 374.8 374 54.3
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 6.6e-101 371.7 371 53.4
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 5.6e-100 368.6 363 52.3
AL7G15340 Arabidopsis lyrata HOM05D005912 ORTHO05D007329 1.1e-98 364.4 374 51.6
AT4G35760 Arabidopsis thaliana HOM05D005912 ORTHO05D007329 2.6e-97 359.8 359 52.9
HPP92_022166 Vanilla planifolia HOM05D005912 ORTHO05D007329 4.9e-96 355.5 289 59.5
AUR62033809 Chenopodium quinoa HOM05D005912 ORTHO05D007329 1.4e-95 354.0 263 63.9
SalBow3G0555 Salvia bowleyana HOM05D005912 ORTHO05D007329 5.4e-95 352.1 369 52.0
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 1.6e-94 350.5 308 63.6
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 1.9e-92 343.6 292 60.6
SGA_v2.0_scaffold108G30993 Striga asiatica HOM05D005912 ORTHO05D007329 1.2e-91 340.9 321 54.8
CANSAT25G2212 Cannabis sativa HOM05D005912 ORTHO05D007329 3.2e-87 326.2 235 68.1
Oeu012550.1 Olea europaea HOM05D005912 ORTHO05D007329 4.2e-87 325.9 298 54.0
MELO3C007950.2 Cucumis melo HOM05D005912 ORTHO05D007329 5.1e-85 318.9 290 55.9
CDE03G0408 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 7.9e-78 295.0 297 50.5
SMO119G0150 Selaginella moellendorffii HOM05D005912 ORTHO05D007329 4.5e-73 279.3 292 49.3
unitig_88.g27769 Utricularia gibba HOM05D005912 ORTHO05D007329 7.6e-73 278.5 235 57.4
Mapoly0023s0120 Marchantia polymorpha HOM05D005912 ORTHO05D007329 8.4e-72 275.0 315 48.9
Glyma.01G161400 Glycine max HOM05D005912 ORTHO05D007329 3.5e-70 269.6 214 63.6
CBR_g79494 Chara braunii HOM05D005912 ORTHO05D007329 1.3e-69 267.7 348 42.5
Pp3c3_30980 Physcomitrium patens HOM05D005912 ORTHO05D007329 5.3e-66 255.8 326 43.6
A08p21710 Brassica napus HOM05D000088 ORTHO05D000933 2.6e-65 253.4 297 48.5
C03p80880 Brassica napus HOM05D000088 ORTHO05D000933 4.9e-64 249.2 335 44.8
BolC3t20343H Brassica oleracea HOM05D000088 ORTHO05D000933 9.3e-63 245.0 335 44.5
Migut.H02191 Erythranthe guttata HOM05D005912 ORTHO05D007329 5.1e-61 239.2 379 40.1
BcaC01g00519 Brassica carinata HOM05D005912 ORTHO05D007329 8.7e-61 238.4 291 48.5
VMungo1215G0927 Vigna mungo HOM05D005912 ORTHO05D007329 2.2e-59 233.8 202 60.9
Peaxi162Scf00300g00017 Petunia axillaris HOM05D005912 ORTHO05D007329 1.1e-58 231.5 256 51.2
DCAR_011589 Daucus carota HOM05D005912 ORTHO05D007329 9.4e-55 218.4 212 55.7
BcaNung05729 Brassica carinata HOM05D005912 ORTHO05D007329 1.6e-54 217.6 256 50.8
SGA_v2.0_scaffold132G34545 Striga asiatica HOM05D005912 ORTHO05D007329 1.5e-52 211.1 172 58.7
PRCOL_00003732 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 3.2e-47 193.4 288 39.6
MCO13G425 Micromonas commoda HOM05D005912 ORTHO05D007329 1.0e-45 188.3 327 36.4
Actinidia22932 Actinidia chinensis HOM05D005912 ORTHO05D007329 4.8e-43 179.5 114 69.3
SGA_v2.0_scaffold132G34543 Striga asiatica HOM05D005912 ORTHO05D007329 5.3e-42 176.0 118 63.6
Cre12.g493150 Chlamydomonas reinhardtii HOM05D005912 ORTHO05D007329 2.6e-41 173.7 326 35.0
SEGI_31957 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 1.7e-40 171.0 166 52.4
MSTRG.15589 Avicennia marina HOM05D005912 ORTHO05D007329 2.9e-40 170.2 110 70.0
Lj2A933T26 Lonicera japonica HOM05D005912 ORTHO05D007329 7.4e-36 155.6 123 69.1
Pp3c1_24560 Physcomitrium patens HOM05D005912 ORTHO05D007329 1.4e-34 151.4 144 50.7
AagrBONN_evm.TU.Sc2ySwM_340.180 Anthoceros agrestis HOM05D005912 ORTHO05D007329 5.0e-32 142.9 210 43.3
arahy.Tifrunner.gnm1.ann1.SP2XL4 Arachis hypogaea HOM05D005912 ORTHO05D007329 1.9e-31 141.0 129 57.4
AagrBONN_evm.TU.Sc2ySwM_228.1421 Anthoceros agrestis HOM05D005912 ORTHO05D007329 2.2e-24 117.5 174 36.2
PRCOL_00002964 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 6.5e-24 115.9 122 50.8
Peaxi162Scf56132g00003 Petunia axillaris HOM05D005912 ORTHO05D007329 1.1e-23 115.2 67 73.1
Gohir.D03G004450 Gossypium hirsutum HOM05D005912 ORTHO05D007329 1.5e-23 114.8 67 73.1
MD15G1236200 Malus domestica HOM05D005912 ORTHO05D007329 1.6e-22 111.3 72 68.1
FAN28G1872 Fragaria x ananassa HOM05D005912 ORTHO05D007329 3.4e-20 103.6 70 64.3
Hma1.2p1_4017F.1_g338140 Hydrangea macrophylla HOM05D005912 ORTHO05D007329 2.2e-19 100.9 56 76.8
SEGI_22324 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 8.3e-19 99.0 68 61.8
Lj2P933T24 Lonicera japonica HOM05D005912 ORTHO05D007329 4.5e-17 93.2 53 71.7
unitig_88.g27770 Utricularia gibba HOM05D005912 ORTHO05D007329 3.6e-14 83.6 55 61.8
MCO11G735 Micromonas commoda HOM05D005912 ORTHO05D007329 2.3e-13 80.9 128 31.2
Lj2A1074G31 Lonicera japonica HOM05D005912 ORTHO05D007329 4.4e-12 76.6 81 50.6
RcHm_v2.0_Chr4g0418411 Rosa chinensis HOM05D005912 ORTHO05D007329 3.9e-08 63.5 68 51.5
RcHm_v2.0_Chr7g0224811 Rosa chinensis HOM05D005912 ORTHO05D007329 1.5e-07 61.6 68 51.5
SEGI_06824 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 1.5e-07 61.6 91 37.4


User provided reference genes

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