Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 1.6e-89 332.8 172 100.0
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.3e-59 233.4 175 73.1
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 4.3e-47 191.8 152 65.1
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 5.3e-45 184.9 152 63.2
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.6e-44 182.6 154 63.6
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 5.8e-44 181.4 150 62.0
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 4.9e-43 178.3 152 60.5
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 6.4e-43 177.9 152 63.2
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 6.4e-43 177.9 150 61.3
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 8.4e-43 177.6 152 60.5
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 1.1e-42 177.2 152 59.9
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.4e-42 176.8 152 62.5
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 1.9e-42 176.4 154 58.4
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 2.4e-42 176.0 173 54.3
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 9.3e-42 174.1 151 60.3
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 1.6e-41 173.3 149 63.1
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 1.6e-41 173.3 152 59.9
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 1.6e-41 173.3 176 56.8
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.5e-41 172.2 150 58.7
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 3.5e-41 172.2 153 59.5
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 4.6e-41 171.8 155 58.1
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 4.6e-41 171.8 140 62.1
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 4.6e-41 171.8 151 60.9
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 6.0e-41 171.4 152 57.9
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 1.3e-40 170.2 173 50.9
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 2.3e-40 169.5 155 57.4
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 2.3e-40 169.5 174 55.7
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 3.0e-40 169.1 152 57.2
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 3.0e-40 169.1 152 57.9
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 3.9e-40 168.7 155 56.1
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 5.1e-40 168.3 150 58.7
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 8.7e-40 167.5 155 56.1
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 8.7e-40 167.5 153 57.5
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 2.5e-39 166.0 152 57.9
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 3.3e-39 165.6 176 50.0
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 3.3e-39 165.6 170 51.8
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 3.3e-39 165.6 149 57.0
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 5.6e-39 164.9 147 55.1
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 7.4e-39 164.5 148 56.8
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.3e-38 163.7 150 57.3
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 1.6e-38 163.3 150 57.3
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.6e-38 163.3 146 61.6
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 3.7e-38 162.2 150 52.0
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 4.8e-38 161.8 149 58.4
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 4.8e-38 161.8 152 52.6
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 4.8e-38 161.8 148 58.1
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 8.2e-38 161.0 150 56.7
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 1.1e-37 160.6 155 56.1
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 1.4e-37 160.2 147 54.4
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 2.4e-37 159.5 146 60.3
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 4.0e-37 158.7 149 57.0
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 6.9e-37 157.9 144 58.3
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 6.9e-37 157.9 141 58.2
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 6.9e-37 157.9 142 59.2
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 6.9e-37 157.9 147 59.2
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 9.0e-37 157.5 147 55.1
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 9.0e-37 157.5 142 58.5
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 2.0e-36 156.4 197 47.2
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 4.5e-36 155.2 159 49.1
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 1.0e-35 154.1 154 51.3
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 2.2e-35 152.9 155 50.3
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 2.9e-35 152.5 153 50.3
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 3.8e-35 152.1 143 55.2
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 6.5e-35 151.4 142 58.5
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 8.4e-35 151.0 153 50.3
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 8.4e-35 151.0 153 49.0
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 2.5e-34 149.4 155 51.6
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 5.5e-34 148.3 150 56.0
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 5.5e-34 148.3 153 47.7
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 5.5e-34 148.3 139 56.8
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 7.1e-34 147.9 154 48.7
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 9.3e-34 147.5 157 48.4
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 1.2e-33 147.1 150 50.7
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 1.6e-33 146.7 150 48.7
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 2.1e-33 146.4 153 51.0
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 2.1e-33 146.4 148 53.4
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 3.5e-33 145.6 150 50.0
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 3.5e-33 145.6 147 52.4
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 3.5e-33 145.6 141 51.8
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.8e-32 143.3 144 52.8
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.3e-32 142.9 146 51.4
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.1e-31 140.6 144 47.9
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 5.7e-31 138.3 154 51.3
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 2.9e-27 125.9 65 89.2
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 6.9e-21 104.8 134 43.3
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.5e-20 103.6 62 72.6
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 1.1e-18 97.4 157 36.9
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 3.3e-15 85.9 113 38.1
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 5.7e-15 85.1 148 33.8
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 4.8e-14 82.0 121 40.5
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 1.2e-12 77.4 65 58.5
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 3.8e-11 72.4 70 52.9
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 1.2e-09 67.4 133 29.3
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 1.4e-08 63.9 78 48.7
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 1.8e-08 63.5 78 48.7
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 8.8e-08 61.2 43 65.1
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 1.1e-07 60.8 107 33.6


User provided reference genes

Program Settings