Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0070700 Salix brachista HOM05D006367 ORTHO05D007942 0.0e+00 1116.3 542 100.0
Potri.005G085800 Populus trichocarpa HOM05D006367 ORTHO05D007942 4.2e-306 1053.9 542 94.5
Manes.12G144300 Manihot esculenta HOM05D006367 ORTHO05D007942 2.0e-244 849.0 537 75.8
Thecc.01G115500 Theobroma cacao HOM05D006367 ORTHO05D007942 1.6e-236 822.8 545 73.2
Duzib187G0980 Durio zibethinus HOM05D006367 ORTHO05D007942 1.1e-234 816.6 544 72.6
Gohir.A02G136100 Gossypium hirsutum HOM05D006367 ORTHO05D007942 5.6e-234 814.3 537 73.2
Gorai.003G048000 Gossypium raimondii HOM05D006367 ORTHO05D007942 1.6e-233 812.8 537 73.4
TAR625G1249 Trochodendron aralioides HOM05D006367 ORTHO05D007942 1.4e-232 809.7 496 77.0
Ciclev10025312m.g Citrus clementina HOM05D006367 ORTHO05D007942 4.4e-231 804.7 541 72.6
COL.COLO4_10985 Corchorus olitorius HOM05D006367 ORTHO05D007942 3.7e-230 801.6 543 72.7
QL06p031689 Quercus lobata HOM05D006367 ORTHO05D007942 7.1e-229 797.3 470 80.2
Atru.chr7.1822 Acer truncatum HOM05D006367 ORTHO05D007942 1.3e-227 793.1 524 75.0
CiPaw.04G090000 Carya illinoinensis HOM05D006367 ORTHO05D007942 5.6e-226 787.7 520 73.8
RcHm_v2.0_Chr2g0117401 Rosa chinensis HOM05D006367 ORTHO05D007942 1.1e-221 773.5 494 75.1
CANSAT21G2601 Cannabis sativa HOM05D006367 ORTHO05D007942 1.4e-221 773.1 543 70.7
TWI75G1400 Tripterygium wilfordii HOM05D006367 ORTHO05D007942 2.4e-221 772.3 474 76.8
Haze_25063 Corylus avellana HOM05D006367 ORTHO05D007942 4.2e-221 771.5 475 78.1
Cfa002770 Carpinus fangiana HOM05D006367 ORTHO05D007942 2.7e-220 768.8 545 70.6
Eucgr.I00312 Eucalyptus grandis HOM05D006367 ORTHO05D007942 2.7e-220 768.8 496 75.0
FAN19G1918 Fragaria x ananassa HOM05D006367 ORTHO05D007942 3.5e-220 768.5 541 70.4
FAN26G2292 Fragaria x ananassa HOM05D006367 ORTHO05D007942 6.6e-219 764.2 538 69.9
Prupe.6G168900 Prunus persica HOM05D006367 ORTHO05D007942 6.6e-219 764.2 546 69.6
RcHm_v2.0_Chr2g0117461 Rosa chinensis HOM05D006367 ORTHO05D007942 8.7e-219 763.8 494 74.3
Nn5g28853 Nelumbo nucifera HOM05D006367 ORTHO05D007942 4.8e-217 758.1 481 74.0
FAN23G0352 Fragaria x ananassa HOM05D006367 ORTHO05D007942 4.0e-216 755.0 539 69.8
PGR004G1961 Punica granatum HOM05D006367 ORTHO05D007942 9.0e-216 753.8 533 70.0
MD10G1028700 Malus domestica HOM05D006367 ORTHO05D007942 4.4e-215 751.5 542 68.5
Oeu028362.1 Olea europaea HOM05D006367 ORTHO05D007942 1.3e-214 750.0 472 74.6
Cc07_g16470 Coffea canephora HOM05D006367 ORTHO05D007942 2.2e-214 749.2 502 71.3
Dinv42673 Davidia involucrata HOM05D006367 ORTHO05D007942 6.4e-214 747.7 441 80.0
Aqoxy6G00434 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 1.9e-213 746.1 485 72.4
MSTRG.23307 Avicennia marina HOM05D006367 ORTHO05D007942 3.2e-213 745.3 522 69.7
arahy.Tifrunner.gnm1.ann1.511U58 Arachis hypogaea HOM05D006367 ORTHO05D007942 2.3e-211 739.2 475 71.2
PSO675G5206 Papaver somniferum HOM05D006367 ORTHO05D007942 6.6e-211 737.6 485 73.0
arahy.Tifrunner.gnm1.ann1.GSD986 Arachis hypogaea HOM05D006367 ORTHO05D007942 8.7e-211 737.3 475 70.9
Hund02300 Selenicereus undatus HOM05D006367 ORTHO05D007942 7.3e-210 734.2 455 74.9
VMungo0251G2542 Vigna mungo HOM05D006367 ORTHO05D007942 9.6e-210 733.8 476 72.3
Ah.15g092040 Amaranthus hybridus HOM05D006367 ORTHO05D007942 6.2e-209 731.1 474 73.0
Psat7g050440 Pisum sativum HOM05D006367 ORTHO05D007942 1.4e-208 729.9 536 65.1
Sc14g0009250 Simmondsia chinensis HOM05D006367 ORTHO05D007942 4.5e-207 724.9 502 70.5
Solyc04g051610.3 Solanum lycopersicum HOM05D006367 ORTHO05D007942 7.6e-207 724.2 465 73.8
MBI04_g33338_MAGBIO Magnolia biondii HOM05D006367 ORTHO05D007942 2.2e-206 722.6 477 71.5
Sopen04g022980 Solanum pennellii HOM05D006367 ORTHO05D007942 3.8e-206 721.8 465 73.5
THA.LOC104807726 Tarenaya hassleriana HOM05D006367 ORTHO05D007942 8.4e-206 720.7 487 70.0
BcaB06g27790 Brassica carinata HOM05D006367 ORTHO05D007942 1.4e-205 719.9 528 66.1
Thhalv10000126m.g Eutrema salsugineum HOM05D006367 ORTHO05D007942 2.4e-205 719.2 490 68.8
AT2G21860 Arabidopsis thaliana HOM05D006367 ORTHO05D007942 3.2e-205 718.8 521 66.4
Carub.0004s0089 Capsella rubella HOM05D006367 ORTHO05D007942 5.5e-205 718.0 493 68.4
Sp4g00950 Schrenkiella parvula HOM05D006367 ORTHO05D007942 5.5e-205 718.0 529 66.4
Nitab4.5_0009050g0050 Nicotiana tabacum HOM05D006367 ORTHO05D007942 9.3e-205 717.2 502 69.1
Nitab4.5_0000184g0160 Nicotiana tabacum HOM05D006367 ORTHO05D007942 1.2e-204 716.8 515 67.8
AL4G11170 Arabidopsis lyrata HOM05D006367 ORTHO05D007942 2.7e-204 715.7 477 70.6
SalBow6G4439 Salvia bowleyana HOM05D006367 ORTHO05D007942 3.5e-204 715.3 469 71.2
BcaC02g08760 Brassica carinata HOM05D006367 ORTHO05D007942 4.6e-204 714.9 523 66.5
C04p50960 Brassica napus HOM05D006367 ORTHO05D007942 4.6e-204 714.9 523 66.5
Lj4g0025161 Lotus japonicus HOM05D006367 ORTHO05D007942 6.0e-204 714.5 502 67.7
AUR62040525 Chenopodium quinoa HOM05D006367 ORTHO05D007942 1.0e-203 713.8 446 75.3
CARHR112860 Cardamine hirsuta HOM05D006367 ORTHO05D007942 1.5e-202 709.9 478 70.5
CSS0012231 Camellia sinensis var. sinensis HOM05D006367 ORTHO05D007942 1.9e-202 709.5 422 77.7
SGA_v2.0_scaffold2G01287 Striga asiatica HOM05D006367 ORTHO05D007942 3.3e-202 708.8 478 70.3
A04p16450 Brassica napus HOM05D006367 ORTHO05D007942 4.3e-202 708.4 490 68.8
BraA04t17280Z Brassica rapa HOM05D006367 ORTHO05D007942 5.6e-202 708.0 490 68.8
Glyma.05G184900 Glycine max HOM05D006367 ORTHO05D007942 9.6e-202 707.2 507 66.9
RcHm_v2.0_Chr2g0117441 Rosa chinensis HOM05D006367 ORTHO05D007942 8.1e-201 704.1 420 78.6
Lalb_Chr07g0184731 Lupinus albus HOM05D006367 ORTHO05D007942 1.1e-200 703.7 527 64.7
HanXRQChr03g0078741 Helianthus annuus HOM05D006367 ORTHO05D007942 9.0e-200 700.7 540 64.3
TPR.G2178 Trifolium pratense HOM05D006367 ORTHO05D007942 1.2e-199 700.3 463 70.4
AUR62039784 Chenopodium quinoa HOM05D006367 ORTHO05D007942 2.0e-199 699.5 441 75.7
Medtr8g092050 Medicago truncatula HOM05D006367 ORTHO05D007942 3.4e-199 698.7 463 70.8
Migut.H02447 Erythranthe guttata HOM05D006367 ORTHO05D007942 4.5e-199 698.4 465 71.4
FvH4_1g22940 Fragaria vesca HOM05D006367 ORTHO05D007942 5.8e-199 698.0 420 78.3
Ca_17687_v3 Cicer arietinum L. HOM05D006367 ORTHO05D007942 7.6e-199 697.6 512 66.2
ECA240G4594 Erigeron canadensis HOM05D006367 ORTHO05D007942 1.3e-198 696.8 452 72.3
Hma1.2p1_0696F.1_g204660 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 4.9e-198 694.9 435 76.3
MELO3C034581.2 Cucumis melo HOM05D006367 ORTHO05D007942 1.1e-197 693.7 486 68.7
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 2.5e-197 692.6 465 72.9
Lsat_1_v5_gn_5_44981 Lactuca sativa HOM05D006367 ORTHO05D007942 2.1e-196 689.5 542 63.7
CARHR112850 Cardamine hirsuta HOM05D006367 ORTHO05D007942 4.3e-194 681.8 473 69.3
CsaV3_2G017740 Cucumis sativus L. HOM05D006367 ORTHO05D007942 4.3e-194 681.8 461 70.9
Aa31LG7G14760 Aethionema arabicum HOM05D006367 ORTHO05D007942 5.7e-194 681.4 531 64.8
Zm00001eb361490 Zea mays HOM05D006367 ORTHO05D007942 7.4e-194 681.0 520 63.8
ClCG02G000950 Citrullus lanatus HOM05D006367 ORTHO05D007942 1.3e-193 680.2 493 67.1
MELO3C020965.2 Cucumis melo HOM05D006367 ORTHO05D007942 1.6e-193 679.9 475 69.7
Os01g0716400 Oryza sativa ssp. japonica HOM05D006367 ORTHO05D007942 4.1e-192 675.2 452 70.4
EL10Ac7g17324 Beta vulgaris HOM05D006367 ORTHO05D007942 1.7e-190 669.8 425 74.4
DCAR_011462 Daucus carota HOM05D006367 ORTHO05D007942 1.7e-190 669.8 488 67.2
CAN.G1044.2 Capsicum annuum HOM05D006367 ORTHO05D007942 5.5e-189 664.8 463 69.3
CDE06G2209 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 3.7e-185 652.1 432 69.4
Sed0027379 Sechium edule HOM05D006367 ORTHO05D007942 9.0e-184 647.5 418 73.9
CDE04G0187 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 1.2e-183 647.1 474 63.1
ATR1120G154 Amborella trichopoda HOM05D006367 ORTHO05D007942 1.4e-181 640.2 499 61.7
Lj4P863T60 Lonicera japonica HOM05D006367 ORTHO05D007942 2.7e-180 636.0 417 73.1
Actinidia05379 Actinidia chinensis HOM05D006367 ORTHO05D007942 1.4e-179 633.6 425 70.8
Gohir.D03G046900 Gossypium hirsutum HOM05D006367 ORTHO05D007942 1.4e-173 613.6 346 82.4
Cc04_g11230 Coffea canephora HOM05D006367 ORTHO05D007942 1.9e-173 613.2 421 70.5
Pp3c8_810 Physcomitrium patens HOM05D006367 ORTHO05D007942 5.5e-149 531.9 484 53.5
AagrBONN_evm.TU.Sc2ySwM_344.2769 Anthoceros agrestis HOM05D006367 ORTHO05D007942 2.7e-148 529.6 460 56.1
SMO367G0721 Selaginella moellendorffii HOM05D006367 ORTHO05D007942 2.0e-146 523.5 456 54.6
Phvul.002G265800 Phaseolus vulgaris HOM05D006367 ORTHO05D007942 7.3e-141 505.0 349 68.8
Nitab4.5_0005102g0010 Nicotiana tabacum HOM05D006367 ORTHO05D007942 1.0e-139 501.1 527 51.4
CBR_g8843 Chara braunii HOM05D006367 ORTHO05D007942 5.6e-133 478.8 506 47.4
PGSC0003DMG400020963 Solanum tuberosum HOM05D006367 ORTHO05D007942 1.7e-126 457.2 425 55.3
Peaxi162Scf00106g01216 Petunia axillaris HOM05D006367 ORTHO05D007942 7.3e-117 425.2 477 49.3
PGSC0003DMG400023291 Solanum tuberosum HOM05D006367 ORTHO05D007942 3.9e-110 402.9 289 67.5
Eucgr.L02754 Eucalyptus grandis HOM05D006367 ORTHO05D007942 6.2e-108 395.6 300 64.7
Cre09.g388060 Chlamydomonas reinhardtii HOM05D006367 ORTHO05D007942 1.3e-105 387.9 475 44.4
PGSC0003DMG400031203 Solanum tuberosum HOM05D006367 ORTHO05D007942 2.9e-97 360.1 204 80.9
AagrBONN_evm.TU.Sc2ySwM_344.1355 Anthoceros agrestis HOM05D006367 ORTHO05D007942 2.5e-93 347.1 452 40.5
MCO11G553 Micromonas commoda HOM05D006367 ORTHO05D007942 3.1e-91 340.1 460 41.1
unitig_899.g14612 Utricularia gibba HOM05D006367 ORTHO05D007942 1.1e-88 331.6 234 69.7
Glyma.08G142950 Glycine max HOM05D006367 ORTHO05D007942 2.6e-82 310.5 187 74.9
PRCOL_00006729 Prasinoderma coloniale HOM05D006367 ORTHO05D007942 1.3e-78 298.1 448 36.4
Hma1.2p1_0696F.1_g204650 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 3.7e-76 290.0 225 65.8
Glyma.08G142900 Glycine max HOM05D006367 ORTHO05D007942 5.7e-69 266.2 245 57.1
HPP92_027992 Vanilla planifolia HOM05D006367 ORTHO05D007942 4.8e-68 263.1 226 56.2
Aqoxy4G01385 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 1.8e-67 261.2 150 78.7
Aqoxy4G01201 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 3.4e-66 256.9 150 77.3
PGSC0003DMG400004546 Solanum tuberosum HOM05D006367 ORTHO05D007942 1.2e-39 168.7 425 30.4
GSVIVG01022252001 Vitis vinifera HOM05D006367 ORTHO05D007942 8.8e-38 162.5 204 48.0
Haze_08452 Corylus avellana HOM05D014029 ORTHO05D044818 8.9e-22 109.4 73 65.8
vmacro12891 Vaccinium macrocarpon HOM05D006367 ORTHO05D007942 2.7e-18 97.8 105 54.3
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 5.2e-14 83.6 88 50.0
Haze_24492 Corylus avellana HOM05D001078 ORTHO05D000927 5.2e-14 83.6 57 75.4
Hma1.2p1_0696F.1_g204670 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 1.5e-13 82.0 47 74.5
CARHR293120 Cardamine hirsuta HOM05D006367 ORTHO05D007942 2.9e-12 77.8 87 47.1
arahy.Tifrunner.gnm1.ann1.ZGZX3T Arachis hypogaea HOM05D006573 ORTHO05D008073 6.4e-12 76.6 273 24.2
SalBow1G0293 Salvia bowleyana HOM05D006573 ORTHO05D008073 8.3e-12 76.3 270 23.7
arahy.Tifrunner.gnm1.ann1.L0KK3Q Arachis hypogaea HOM05D006573 ORTHO05D008073 2.4e-11 74.7 273 24.2
MCO16G084 Micromonas commoda HOM05D006573 ORTHO05D008073 7.0e-11 73.2 269 24.9
SalBow1G2715 Salvia bowleyana HOM05D006573 ORTHO05D008073 7.0e-11 73.2 270 23.3
Zm00001eb085840 Zea mays HOM05D006573 ORTHO05D008073 7.0e-11 73.2 270 23.0
Dinv19279 Davidia involucrata HOM05D006573 ORTHO05D008073 9.2e-11 72.8 313 22.4
CARHR034070 Cardamine hirsuta HOM05D006367 ORTHO05D007942 1.6e-10 72.0 135 37.8
Glyma.03G253500 Glycine max HOM05D006573 ORTHO05D008073 2.0e-10 71.6 299 23.7
Glyma.19G251000 Glycine max HOM05D006573 ORTHO05D008073 2.0e-10 71.6 299 23.4
Pp3c3_13220 Physcomitrium patens HOM05D006573 ORTHO05D008073 3.5e-10 70.9 277 23.1
Ca_09476_v3 Cicer arietinum L. HOM05D006573 ORTHO05D008073 4.6e-10 70.5 273 22.7
Mapoly0111s0023 Marchantia polymorpha HOM05D006573 ORTHO05D008073 4.6e-10 70.5 285 23.9
Phvul.006G108200 Phaseolus vulgaris HOM05D006573 ORTHO05D008073 4.6e-10 70.5 271 23.2
Medtr7g116630 Medicago truncatula HOM05D006573 ORTHO05D008073 6.0e-10 70.1 272 23.5
VMungo0540G0667 Vigna mungo HOM05D006573 ORTHO05D008073 7.8e-10 69.7 272 23.2
AagrBONN_evm.TU.Sc2ySwM_228.1660 Anthoceros agrestis HOM05D006573 ORTHO05D008073 1.0e-09 69.3 270 22.6
CBR_g38554 Chara braunii HOM05D006573 ORTHO05D008073 2.3e-09 68.2 264 21.6
Lalb_Chr18g0044221 Lupinus albus HOM05D006573 ORTHO05D008073 2.3e-09 68.2 271 24.4
TPR.G4727 Trifolium pratense HOM05D006573 ORTHO05D008073 3.0e-09 67.8 272 22.4
SEGI_03231 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 3.9e-09 67.4 270 22.2
Psat3g005000 Pisum sativum HOM05D006573 ORTHO05D008073 6.6e-09 66.6 236 22.5


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