Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 5.8e-141 504.2 256 100.0
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 3.0e-129 465.3 256 93.4
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 6.7e-129 464.2 256 93.0
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 3.7e-79 298.9 252 62.3
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 1.4e-78 297.0 255 60.8
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 6.6e-76 288.1 298 53.7
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 3.1e-73 279.3 255 60.0
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 5.2e-73 278.5 257 56.8
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 2.6e-72 276.2 259 58.7
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 1.4e-70 270.4 256 57.8
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 3.9e-68 262.3 252 55.6
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 1.6e-66 256.9 251 56.2
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 2.1e-66 256.5 264 52.7
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 4.7e-66 255.4 259 53.7
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 4.7e-66 255.4 259 55.6
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 4.7e-66 255.4 267 54.3
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 1.4e-65 253.8 249 54.2
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 1.8e-65 253.4 250 56.0
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 2.3e-65 253.1 249 54.6
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 3.1e-65 252.7 249 53.0
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 6.8e-65 251.5 256 55.5
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 8.9e-65 251.1 251 55.8
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 1.2e-64 250.8 257 55.3
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 2.0e-64 250.0 213 62.0
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 2.0e-64 250.0 251 55.8
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 2.6e-64 249.6 256 54.7
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 1.1e-62 244.2 254 53.9
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 3.2e-62 242.7 248 54.4
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 1.2e-61 240.7 257 52.1
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 1.3e-60 237.3 265 51.7
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 1.7e-60 236.9 260 52.7
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 3.0e-60 236.1 250 50.8
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 1.9e-59 233.4 249 50.6
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 7.3e-59 231.5 258 51.2
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 2.8e-58 229.6 256 53.5
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 3.6e-58 229.2 253 53.8
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 2.2e-55 219.9 263 48.7
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 6.4e-55 218.4 251 50.2
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 2.7e-53 213.0 256 46.9
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 4.6e-53 212.2 250 47.6
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 3.9e-52 209.1 375 38.1
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 3.9e-52 209.1 260 47.3
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 5.1e-52 208.8 271 49.8
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 6.6e-52 208.4 260 48.1
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 8.7e-52 208.0 262 45.4
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 1.5e-51 207.2 254 45.3
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 3.3e-51 206.1 260 47.7
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 6.2e-50 201.8 263 44.1
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 3.1e-49 199.5 251 45.0
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 4.0e-49 199.1 271 44.3
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 5.3e-49 198.7 253 46.2
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 5.3e-49 198.7 255 44.7
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 3.4e-48 196.1 253 44.7
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 5.8e-48 195.3 235 48.5
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 1.7e-47 193.7 271 42.8
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 4.9e-47 192.2 269 43.1
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 4.9e-47 192.2 269 43.1
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 3.2e-46 189.5 171 55.6
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 7.1e-46 188.3 253 44.3
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 2.1e-45 186.8 269 42.8
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 2.7e-45 186.4 213 50.2
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 1.3e-44 184.1 249 45.0
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 2.3e-44 183.3 232 47.8
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 3.0e-44 183.0 260 45.8
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 5.1e-44 182.2 252 43.7
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 8.7e-44 181.4 252 42.9
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 7.3e-43 178.3 253 43.9
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 7.3e-43 178.3 173 52.6
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 9.6e-43 177.9 157 56.1
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 3.1e-41 172.9 253 42.3
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 6.9e-41 171.8 253 41.9
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 1.2e-40 171.0 308 37.7
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 3.4e-40 169.5 252 40.9
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 7.6e-40 168.3 252 40.5
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 7.6e-40 168.3 252 40.5
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 1.3e-39 167.5 263 39.5
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 1.3e-39 167.5 252 41.7
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 1.1e-38 164.5 178 48.9
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 6.7e-36 155.2 270 35.9
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 1.5e-35 154.1 252 39.7
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 3.3e-35 152.9 267 37.8
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 4.3e-35 152.5 168 55.4
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 1.1e-33 147.9 156 49.4
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 3.1e-33 146.4 238 39.1
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 6.9e-33 145.2 245 38.8
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 5.8e-32 142.1 185 46.5
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 8.4e-31 138.3 255 38.0
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 2.5e-30 136.7 203 39.4
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 2.7e-29 133.3 201 40.3
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 1.8e-28 130.6 167 44.9
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 3.0e-28 129.8 105 57.1
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 3.0e-28 129.8 244 36.9
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 2.5e-27 126.7 97 58.8
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 7.4e-27 125.2 272 32.0
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 1.1e-25 121.3 114 55.3
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 1.3e-23 114.4 216 33.3
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 3.8e-23 112.8 234 32.9
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 3.2e-22 109.8 217 33.2
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 5.5e-22 109.0 149 47.0
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 1.2e-21 107.8 279 28.3
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 3.9e-20 102.8 149 45.0
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 9.7e-19 98.2 269 29.4
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 1.1e-17 94.7 96 49.0
AagrBONN_evm.TU.Sc2ySwM_117.1984 Anthoceros agrestis HOM05D007225 ORTHO05D009062 2.9e-15 86.7 257 29.2
GSVIVG01022344001 Vitis vinifera HOM05D007225 ORTHO05D009062 1.1e-14 84.7 107 53.3
arahy.Tifrunner.gnm1.ann1.LBHD5T Arachis hypogaea HOM05D007225 ORTHO05D009062 4.8e-10 69.3 147 34.7
SHI11459 Sapria himalayana HOM05D038817 ORTHO05D009062 4.5e-08 62.8 57 56.1
SEGI_25786 Sequoiadendron giganteum HOM05D021798 ORTHO05D009062 5.9e-08 62.4 155 24.5
Zm00001eb434540 Zea mays HOM05D007225 ORTHO05D009062 1.1e-06 58.2 110 33.6


User provided reference genes

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