Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 2.4e-117 425.6 232 100.0
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 3.5e-68 262.3 229 71.2
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 2.6e-47 193.0 227 51.5
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 2.9e-46 189.5 233 51.5
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 2.9e-46 189.5 233 52.8
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 3.2e-45 186.0 231 51.9
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 4.6e-44 182.2 229 50.2
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 6.0e-44 181.8 251 49.0
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 1.3e-43 180.6 231 50.2
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 1.9e-42 176.8 234 48.3
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 7.4e-42 174.9 199 54.8
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 9.6e-42 174.5 241 49.0
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.1e-41 173.3 237 47.7
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 2.8e-41 172.9 199 53.8
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 4.8e-41 172.2 231 51.5
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 6.2e-41 171.8 232 49.6
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 8.1e-41 171.4 199 53.8
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 1.4e-40 170.6 245 46.1
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.8e-40 170.2 246 45.9
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 2.4e-40 169.9 232 49.1
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 2.4e-40 169.9 246 45.9
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 4.0e-40 169.1 240 48.3
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 5.3e-40 168.7 232 48.7
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 5.3e-40 168.7 240 46.7
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 6.9e-40 168.3 239 47.3
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 9.0e-40 167.9 236 44.5
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 3.4e-39 166.0 232 48.7
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 4.5e-39 165.6 227 48.9
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 7.6e-39 164.9 230 48.7
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 9.9e-39 164.5 231 48.5
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 4.9e-38 162.2 155 57.4
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 6.4e-38 161.8 230 47.8
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 1.4e-37 160.6 230 48.3
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 1.9e-37 160.2 234 47.4
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 4.2e-37 159.1 231 45.0
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 5.5e-37 158.7 203 50.2
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 7.1e-37 158.3 231 45.0
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 1.6e-36 157.1 231 45.9
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 1.6e-36 157.1 202 50.0
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 2.7e-36 156.4 239 47.3
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 3.5e-36 156.0 232 44.8
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 2.3e-35 153.3 128 70.3
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 3.9e-35 152.5 233 46.4
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 3.9e-35 152.5 240 45.0
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 6.7e-35 151.8 170 51.2
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 2.5e-34 149.8 238 45.0
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 4.3e-34 149.1 198 47.5
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 5.6e-34 148.7 198 48.0
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 9.6e-34 147.9 198 47.0
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 1.3e-33 147.5 159 53.5
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 1.3e-33 147.5 243 42.8
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 2.1e-33 146.7 153 52.9
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 2.1e-33 146.7 228 44.7
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 2.8e-33 146.4 241 42.3
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 4.8e-33 145.6 238 42.4
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 3.1e-32 142.9 233 42.5
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 2.6e-31 139.8 199 45.2
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 4.5e-31 139.0 201 44.8
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 4.5e-31 139.0 234 41.9
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 1.7e-30 137.1 147 51.7
Potri.007G105401 Populus trichocarpa HOM05D007927 ORTHO05D010029 7.1e-29 131.7 106 74.5
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 2.1e-28 130.2 153 47.1
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 7.9e-28 128.3 172 45.3
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 2.5e-26 123.2 152 46.7
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.3e-25 120.9 184 42.4
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 2.2e-25 120.2 154 44.2
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 3.7e-25 119.4 62 93.5
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 6.9e-24 115.2 177 41.2
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 6.1e-20 102.1 148 40.5
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 9.7e-18 94.7 62 69.4
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 1.3e-14 84.3 48 83.3
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 1.7e-14 84.0 48 81.2
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.7e-14 84.0 52 75.0
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 3.8e-14 82.8 46 82.6
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 8.5e-14 81.6 46 80.4
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 4.2e-13 79.3 46 78.3
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 7.2e-13 78.6 46 78.3
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.8e-11 73.9 46 76.1
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 5.3e-08 62.4 89 47.2
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 6.5e-06 55.5 55 43.6


User provided reference genes

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