Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0034600 Salix brachista HOM05D006420 ORTHO05D008009 3.7e-131 471.5 226 100.0
Manes.08G120400 Manihot esculenta HOM05D006420 ORTHO05D008009 3.7e-38 162.5 138 59.4
Potri.005G032100 Populus trichocarpa HOM05D006420 ORTHO05D008009 1.2e-36 157.5 130 63.1
THA.LOC104820863 Tarenaya hassleriana HOM05D006420 ORTHO05D008009 2.6e-36 156.4 134 59.0
Potri.013G021600 Populus trichocarpa HOM05D006420 ORTHO05D008009 1.3e-35 154.1 130 61.5
QL03p007116 Quercus lobata HOM05D006420 ORTHO05D008009 3.8e-35 152.5 147 55.1
CARHR287540 Cardamine hirsuta HOM05D006420 ORTHO05D008009 6.5e-35 151.8 128 60.2
BcaC06g31763 Brassica carinata HOM05D006420 ORTHO05D008009 1.9e-34 150.2 134 56.0
Thecc.05G302400 Theobroma cacao HOM05D006420 ORTHO05D008009 2.5e-34 149.8 128 60.9
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 4.2e-34 149.1 136 55.1
Carub.0002s0818 Capsella rubella HOM05D006420 ORTHO05D008009 5.5e-34 148.7 134 56.0
Hma1.2p1_0928F.1_g237740 Hydrangea macrophylla HOM05D006420 ORTHO05D008009 5.5e-34 148.7 134 56.7
AL1G65580 Arabidopsis lyrata HOM05D006420 ORTHO05D008009 9.4e-34 147.9 134 55.2
SpUn0004_0090 Schrenkiella parvula HOM05D006420 ORTHO05D008009 9.4e-34 147.9 134 56.0
Cfa006594 Carpinus fangiana HOM05D006420 ORTHO05D008009 1.2e-33 147.5 134 56.0
Cpa.g.sc48.61 Carica papaya HOM05D006420 ORTHO05D008009 2.1e-33 146.7 130 58.5
Duzib177G0348 Durio zibethinus HOM05D006420 ORTHO05D008009 2.7e-33 146.4 145 54.5
Thhalv10023646m.g Eutrema salsugineum HOM05D006420 ORTHO05D008009 4.7e-33 145.6 134 55.2
RhsimUnG0226900 Rhododendron simsii HOM05D006420 ORTHO05D008009 6.1e-33 145.2 134 56.0
COL.COLO4_13456 Corchorus olitorius HOM05D006420 ORTHO05D008009 1.0e-32 144.4 128 58.6
AT1G55000 Arabidopsis thaliana HOM05D006420 ORTHO05D008009 1.4e-32 144.1 134 54.5
Cfa006595 Carpinus fangiana HOM05D006420 ORTHO05D008009 1.4e-32 144.1 134 53.7
Nn4g26277 Nelumbo nucifera HOM05D006420 ORTHO05D008009 1.4e-32 144.1 149 51.7
BcaC02g10755 Brassica carinata HOM05D006420 ORTHO05D008009 1.8e-32 143.7 134 54.5
C04p25420 Brassica napus HOM05D006420 ORTHO05D008009 1.8e-32 143.7 134 54.5
BolC4t24060H Brassica oleracea HOM05D006420 ORTHO05D008009 1.8e-32 143.7 134 54.5
CiPaw.07G020700 Carya illinoinensis HOM05D006420 ORTHO05D008009 1.8e-32 143.7 134 54.5
Ciclev10002177m.g Citrus clementina HOM05D006420 ORTHO05D008009 1.8e-32 143.7 136 54.4
Actinidia05697 Actinidia chinensis HOM05D006420 ORTHO05D008009 2.3e-32 143.3 136 54.4
CAN.G1034.41 Capsicum annuum HOM05D006420 ORTHO05D008009 3.0e-32 142.9 135 54.1
Atru.chr2.393 Acer truncatum HOM05D006420 ORTHO05D008009 3.9e-32 142.5 156 48.7
Peaxi162Scf00037g00513 Petunia axillaris HOM05D006420 ORTHO05D008009 5.1e-32 142.1 134 54.5
Sabra13G0024000 Salix brachista HOM05D006420 ORTHO05D008009 6.7e-32 141.7 130 58.5
AUR62005152 Chenopodium quinoa HOM05D006420 ORTHO05D008009 8.8e-32 141.4 134 53.7
TAR365G0270 Trochodendron aralioides HOM05D006420 ORTHO05D008009 8.8e-32 141.4 149 50.3
A03p68650 Brassica napus HOM05D006420 ORTHO05D008009 1.1e-31 141.0 134 53.0
BraSC39t46193Z Brassica rapa HOM05D006420 ORTHO05D008009 1.1e-31 141.0 134 53.0
TAR636G1821 Trochodendron aralioides HOM05D006420 ORTHO05D008009 1.5e-31 140.6 128 54.7
arahy.Tifrunner.gnm1.ann1.7ESY4D Arachis hypogaea HOM05D006420 ORTHO05D008009 2.0e-31 140.2 196 43.4
EL10Ac4g09358 Beta vulgaris HOM05D006420 ORTHO05D008009 2.0e-31 140.2 134 54.5
Prupe.6G324800 Prunus persica HOM05D006420 ORTHO05D008009 2.0e-31 140.2 154 50.0
Solyc01g099130.3 Solanum lycopersicum HOM05D006420 ORTHO05D008009 2.0e-31 140.2 129 55.0
Sopen01g042690 Solanum pennellii HOM05D006420 ORTHO05D008009 2.0e-31 140.2 129 55.0
Duzib106G1877 Durio zibethinus HOM05D006420 ORTHO05D008009 3.3e-31 139.4 128 57.8
PGSC0003DMG400024687 Solanum tuberosum HOM05D006420 ORTHO05D008009 3.3e-31 139.4 129 55.0
Ca_10114_v3 Cicer arietinum L. HOM05D006420 ORTHO05D008009 4.4e-31 139.0 130 54.6
FAN05G1000 Fragaria x ananassa HOM05D006420 ORTHO05D008009 4.4e-31 139.0 134 54.5
Dinv23938 Davidia involucrata HOM05D006420 ORTHO05D008009 5.7e-31 138.7 128 54.7
Lj9A85G78 Lonicera japonica HOM05D006420 ORTHO05D008009 5.7e-31 138.7 134 54.5
Lj9A86G16 Lonicera japonica HOM05D006420 ORTHO05D008009 5.7e-31 138.7 134 54.5
Gohir.A08G210900 Gossypium hirsutum HOM05D006420 ORTHO05D008009 7.4e-31 138.3 128 55.5
Ah.04g160290 Amaranthus hybridus HOM05D006420 ORTHO05D008009 9.7e-31 137.9 147 51.0
arahy.Tifrunner.gnm1.ann1.GHU2GX Arachis hypogaea HOM05D006420 ORTHO05D008009 9.7e-31 137.9 130 54.6
MBI04_g29616_MAGBIO Magnolia biondii HOM05D006420 ORTHO05D008009 9.7e-31 137.9 134 52.2
Nitab4.5_0000137g0140 Nicotiana tabacum HOM05D006420 ORTHO05D008009 9.7e-31 137.9 134 52.2
Haze_04190 Corylus avellana HOM05D006420 ORTHO05D008009 1.3e-30 137.5 201 42.8
DCAR_029409 Daucus carota HOM05D006420 ORTHO05D008009 1.3e-30 137.5 136 52.9
Glyma.10G154000 Glycine max HOM05D006420 ORTHO05D008009 1.7e-30 137.1 128 54.7
Gohir.D08G227700 Gossypium hirsutum HOM05D006420 ORTHO05D008009 1.7e-30 137.1 128 55.5
Gorai.004G241900 Gossypium raimondii HOM05D006420 ORTHO05D008009 1.7e-30 137.1 128 55.5
vmacro05011 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 1.7e-30 137.1 134 52.2
Medtr1g082950 Medicago truncatula HOM05D006420 ORTHO05D008009 2.2e-30 136.7 130 54.6
GSVIVG01000081001 Vitis vinifera HOM05D006420 ORTHO05D008009 2.2e-30 136.7 134 53.0
Glyma.20G234300 Glycine max HOM05D006420 ORTHO05D008009 2.8e-30 136.3 128 54.7
CANSAT54G1557 Cannabis sativa HOM05D006420 ORTHO05D008009 3.7e-30 136.0 128 53.9
AUR62000819 Chenopodium quinoa HOM05D006420 ORTHO05D008009 3.7e-30 136.0 134 53.0
PGR083G0891 Punica granatum HOM05D006420 ORTHO05D008009 3.7e-30 136.0 134 53.0
Aqoxy5G00493 Aquilegia oxysepala HOM05D006420 ORTHO05D008009 4.8e-30 135.6 133 52.6
Cc02_g33350 Coffea canephora HOM05D006420 ORTHO05D008009 6.3e-30 135.2 133 51.1
PSO210G7816 Papaver somniferum HOM05D006420 ORTHO05D008009 6.3e-30 135.2 148 49.3
RcHm_v2.0_Chr3g0454981 Rosa chinensis HOM05D006420 ORTHO05D008009 6.3e-30 135.2 158 45.6
Sed0005627 Sechium edule HOM05D006420 ORTHO05D008009 6.3e-30 135.2 128 53.9
FvH4_6g06020 Fragaria vesca HOM05D006420 ORTHO05D008009 8.2e-30 134.8 158 46.2
FAN14G2531 Fragaria x ananassa HOM05D006420 ORTHO05D008009 8.2e-30 134.8 158 46.2
Hund21694 Selenicereus undatus HOM05D006420 ORTHO05D008009 8.2e-30 134.8 134 53.7
Sc06g0003280 Simmondsia chinensis HOM05D006420 ORTHO05D008009 1.1e-29 134.4 134 51.5
Lsat_1_v5_gn_9_123421 Lactuca sativa HOM05D006420 ORTHO05D008009 1.4e-29 134.0 134 51.5
Lalb_Chr21g0310681 Lupinus albus HOM05D006420 ORTHO05D008009 1.4e-29 134.0 128 55.5
MD04G1204800 Malus domestica HOM05D006420 ORTHO05D008009 1.8e-29 133.7 150 48.7
MD12G1218500 Malus domestica HOM05D006420 ORTHO05D008009 1.8e-29 133.7 134 51.5
Psat6g150480 Pisum sativum HOM05D006420 ORTHO05D008009 1.8e-29 133.7 130 53.8
TPR.G6113 Trifolium pratense HOM05D006420 ORTHO05D008009 1.8e-29 133.7 127 54.3
CsaV3_2G005340 Cucumis sativus L. HOM05D006420 ORTHO05D008009 5.3e-29 132.1 128 53.9
MELO3C004253.2 Cucumis melo HOM05D000208 ORTHO05D000130 7.0e-29 131.7 128 53.9
FAN02G2504 Fragaria x ananassa HOM05D006420 ORTHO05D008009 7.0e-29 131.7 134 50.0
FAN09G3808 Fragaria x ananassa HOM05D006420 ORTHO05D008009 7.0e-29 131.7 134 51.5
Lj5g0015213 Lotus japonicus HOM05D006420 ORTHO05D008009 9.1e-29 131.3 130 51.5
CSS0034260 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 1.2e-28 131.0 134 50.0
ClCG02G015760 Citrullus lanatus HOM05D006420 ORTHO05D008009 1.2e-28 131.0 151 47.7
Migut.N01987 Erythranthe guttata HOM05D006420 ORTHO05D008009 2.6e-28 129.8 130 50.0
Migut.N02012 Erythranthe guttata HOM05D006420 ORTHO05D008009 2.6e-28 129.8 130 50.0
CSS0037657 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 3.5e-28 129.4 134 50.0
Oeu010909.1 Olea europaea HOM05D006420 ORTHO05D008009 3.5e-28 129.4 136 48.5
MSTRG.5100 Avicennia marina HOM05D006420 ORTHO05D008009 7.7e-28 128.3 130 47.7
FAN05G3282 Fragaria x ananassa HOM05D006420 ORTHO05D008009 7.7e-28 128.3 134 50.7
Nn1g02269 Nelumbo nucifera HOM05D006420 ORTHO05D008009 1.0e-27 127.9 133 50.4
Phvul.007G179700 Phaseolus vulgaris HOM05D006420 ORTHO05D008009 1.3e-27 127.5 128 52.3
VMungo0720G1765 Vigna mungo HOM05D006420 ORTHO05D008009 1.3e-27 127.5 128 50.8
TWI56G0424 Tripterygium wilfordii HOM05D006420 ORTHO05D008009 1.7e-27 127.1 136 50.0
HPP92_020377 Vanilla planifolia HOM05D006420 ORTHO05D008009 1.5e-26 124.0 153 45.8
ATR0332G062 Amborella trichopoda HOM05D006420 ORTHO05D008009 2.5e-26 123.2 128 49.2
ECA232G4325 Erigeron canadensis HOM05D006420 ORTHO05D008009 4.2e-26 122.5 129 49.6
HanXRQChr16g0524621 Helianthus annuus HOM05D006420 ORTHO05D008009 6.7e-24 115.2 131 45.8
Zm00001eb054020 Zea mays HOM05D006420 ORTHO05D008009 2.6e-23 113.2 128 45.3
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 1.2e-20 104.4 104 51.0
Os03g0699600 Oryza sativa ssp. japonica HOM05D006420 ORTHO05D008009 1.2e-20 104.4 152 38.2
Pp3c16_5370 Physcomitrium patens HOM05D006420 ORTHO05D008009 4.2e-18 95.9 130 39.2
SMO356G0643 Selaginella moellendorffii HOM05D006420 ORTHO05D008009 8.0e-17 91.7 128 35.9
AagrBONN_evm.TU.Sc2ySwM_368.542 Anthoceros agrestis HOM05D006420 ORTHO05D008009 8.8e-16 88.2 155 34.8
MD10G1167700 Malus domestica HOM05D006420 ORTHO05D008009 1.2e-15 87.8 97 47.4
Nitab4.5_0005541g0070 Nicotiana tabacum HOM05D006420 ORTHO05D008009 1.2e-15 87.8 135 37.8
Rhsim07G0185100 Rhododendron simsii HOM05D006420 ORTHO05D008009 4.4e-15 85.9 55 74.5
Eucgr.B01946 Eucalyptus grandis HOM05D006420 ORTHO05D008009 5.7e-15 85.5 49 75.5
SGA_v2.0_scaffold81G26063 Striga asiatica HOM05D006420 ORTHO05D000105 8.3e-14 81.6 49 69.4
Eucgr.B01949 Eucalyptus grandis HOM05D006420 ORTHO05D008009 3.1e-13 79.7 47 74.5
vmacro23281 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 7.0e-13 78.6 47 68.1
Eucgr.B01859 Eucalyptus grandis HOM05D006420 ORTHO05D008009 1.2e-12 77.8 47 70.2
QL03p007970 Quercus lobata HOM05D006420 ORTHO05D008009 7.7e-12 75.1 68 57.4
QL03p007137 Quercus lobata HOM05D006420 ORTHO05D008009 5.0e-11 72.4 44 65.9
QL03p007977 Quercus lobata HOM05D006420 ORTHO05D008009 5.0e-11 72.4 44 65.9
QL03p007144 Quercus lobata HOM05D006420 ORTHO05D008009 6.5e-11 72.0 69 56.5


User provided reference genes

Program Settings