Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0020900 Salix brachista HOM05D006340 ORTHO05D007568 2.2e-146 522.3 268 100.0
Sabra05G0021400 Salix brachista HOM05D006340 ORTHO05D007568 4.1e-121 438.3 270 86.7
Potri.005G013000 Populus trichocarpa HOM05D006340 ORTHO05D007568 8.6e-111 404.1 272 79.4
Potri.013G008200 Populus trichocarpa HOM05D006340 ORTHO05D007568 1.2e-96 357.1 271 70.8
Sabra05G0022400 Salix brachista HOM05D006340 ORTHO05D007568 1.5e-91 340.1 225 80.9
Sabra13G0006900 Salix brachista HOM05D006340 ORTHO05D007568 4.6e-88 328.6 271 66.1
QL03p014074 Quercus lobata HOM05D006340 ORTHO05D007568 1.5e-67 260.4 278 55.0
Cfa006707 Carpinus fangiana HOM05D006340 ORTHO05D007568 3.7e-61 239.2 275 49.8
Atru.chr2.357 Acer truncatum HOM05D006340 ORTHO05D007568 1.3e-58 230.7 283 48.8
CiPaw.07G030100 Carya illinoinensis HOM05D006340 ORTHO05D007568 1.9e-57 226.9 278 49.3
TAR362G0132 Trochodendron aralioides HOM05D006340 ORTHO05D007568 5.5e-57 225.3 279 48.0
Haze_04056 Corylus avellana HOM05D006340 ORTHO05D007568 3.0e-55 219.5 275 48.0
CSS0010691 Camellia sinensis var. sinensis HOM05D006340 ORTHO05D007568 3.9e-55 219.2 277 47.3
Manes.09G177400 Manihot esculenta HOM05D006340 ORTHO05D007568 4.3e-54 215.7 273 50.5
Duzib177G0712 Durio zibethinus HOM05D006340 ORTHO05D007568 8.2e-53 211.5 278 47.8
Ciclev10000538m.g Citrus clementina HOM05D006340 ORTHO05D007568 2.4e-52 209.9 271 48.0
TWI36G0703 Tripterygium wilfordii HOM05D006340 ORTHO05D007568 2.4e-52 209.9 275 47.3
Thecc.05G323700 Theobroma cacao HOM05D006340 ORTHO05D007568 1.5e-51 207.2 285 46.3
Prupe.6G312400 Prunus persica HOM05D006340 ORTHO05D007568 5.9e-51 205.3 270 45.9
Dinv24462 Davidia involucrata HOM05D006340 ORTHO05D007568 1.4e-49 200.7 275 44.0
TAR633G1326 Trochodendron aralioides HOM05D006340 ORTHO05D007568 1.9e-49 200.3 274 47.8
Duzib128G1170 Durio zibethinus HOM05D006340 ORTHO05D007568 7.9e-48 194.9 266 44.7
Actinidia35518 Actinidia chinensis HOM05D006340 ORTHO05D007568 1.5e-46 190.7 265 44.2
Actinidia16863 Actinidia chinensis HOM05D006340 ORTHO05D007568 2.0e-46 190.3 275 45.8
Sed0011043 Sechium edule HOM05D006340 ORTHO05D007568 1.1e-44 184.5 282 42.9
CsaV3_2G007150 Cucumis sativus L. HOM05D006340 ORTHO05D007568 2.4e-44 183.3 272 42.3
ClCG02G014860 Citrullus lanatus HOM05D006340 ORTHO05D007568 1.2e-43 181.0 279 43.0
Cpa.g.sc48.167 Carica papaya HOM05D006340 ORTHO05D007568 5.9e-43 178.7 278 41.7
Sed0017369 Sechium edule HOM05D006340 ORTHO05D007568 7.7e-43 178.3 270 42.2
Gohir.D11G284300 Gossypium hirsutum HOM05D006340 ORTHO05D007568 1.7e-42 177.2 281 42.3
Glyma.20G096700 Glycine max HOM05D006340 ORTHO05D007568 2.2e-42 176.8 272 42.6
Medtr1g084120 Medicago truncatula HOM05D006340 ORTHO05D007568 1.4e-41 174.1 273 39.6
Glyma.10G146700 Glycine max HOM05D006340 ORTHO05D007568 1.9e-41 173.7 273 41.8
TPR.G2586 Trifolium pratense HOM05D006340 ORTHO05D007568 1.9e-41 173.7 278 40.3
MD00G1208300 Malus domestica HOM05D006340 ORTHO05D007568 9.4e-41 171.4 274 40.9
Phvul.007G201700 Phaseolus vulgaris HOM05D006340 ORTHO05D007568 1.6e-40 170.6 261 42.9
Ca_10176_v3 Cicer arietinum L. HOM05D006340 ORTHO05D007568 2.7e-40 169.9 276 40.2
CiPaw.08G154900 Carya illinoinensis HOM05D006340 ORTHO05D007568 3.6e-40 169.5 278 41.7
Hma1.2p1_0008F-1.1_g005560 Hydrangea macrophylla HOM05D006340 ORTHO05D007568 4.7e-40 169.1 275 42.2
Psat6g152600 Pisum sativum HOM05D006340 ORTHO05D007568 4.7e-40 169.1 279 41.2
Lju926C5T2 Lonicera japonica HOM05D006340 ORTHO05D007568 8.8e-39 164.9 270 38.9
Aqoxy2G02721 Aquilegia oxysepala HOM05D006340 ORTHO05D007568 4.4e-38 162.5 284 40.5
Dinv30898 Davidia involucrata HOM05D006340 ORTHO05D007568 9.7e-38 161.4 274 42.7
Gorai.004G236300 Gossypium raimondii HOM05D006340 ORTHO05D007568 9.7e-38 161.4 239 46.0
Cc02_g35160 Coffea canephora HOM05D006340 ORTHO05D007568 1.3e-37 161.0 263 39.5
MELO3C004178.2 Cucumis melo HOM05D006340 ORTHO05D007568 2.2e-37 160.2 276 39.5
VMungo0720G2454 Vigna mungo HOM05D006340 ORTHO05D007568 2.8e-37 159.8 251 42.2
DCAR_025287 Daucus carota HOM05D006340 ORTHO05D007568 4.8e-37 159.1 271 38.4
COL.COLO4_05545 Corchorus olitorius HOM05D006340 ORTHO05D007568 1.4e-36 157.5 279 41.6
Gorai.007G307200 Gossypium raimondii HOM05D006340 ORTHO05D007568 3.1e-36 156.4 278 42.1
arahy.Tifrunner.gnm1.ann1.35WTTC Arachis hypogaea HOM05D006340 ORTHO05D007568 9.1e-36 154.8 274 42.0
arahy.Tifrunner.gnm1.ann1.31L8TN Arachis hypogaea HOM05D006340 ORTHO05D007568 1.6e-35 154.1 277 41.5
MBI18_g32031_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 1.0e-34 151.4 263 39.2
Nn3g21728 Nelumbo nucifera HOM05D006340 ORTHO05D007568 3.8e-34 149.4 286 39.9
HanXRQChr11g0324231 Helianthus annuus HOM05D006340 ORTHO05D007568 6.5e-34 148.7 284 38.4
MD12G1205300 Malus domestica HOM05D006340 ORTHO05D007568 1.1e-33 147.9 275 38.2
Lsat_1_v5_gn_5_40480 Lactuca sativa HOM05D006340 ORTHO05D007568 1.9e-33 147.1 276 37.3
CANSAT54G2981 Cannabis sativa HOM05D006340 ORTHO05D007568 3.2e-33 146.4 230 43.9
Gohir.D08G222500 Gossypium hirsutum HOM05D006340 ORTHO05D007568 3.2e-33 146.4 239 43.9
SalBow3G0642 Salvia bowleyana HOM05D006340 ORTHO05D007568 3.2e-33 146.4 272 40.4
GSVIVG01031248001 Vitis vinifera HOM05D006340 ORTHO05D007568 4.2e-33 146.0 277 39.0
MSTRG.27938 Avicennia marina HOM05D006340 ORTHO05D007568 4.7e-32 142.5 275 38.2
AUR62006742 Chenopodium quinoa HOM05D006340 ORTHO05D007568 4.7e-32 142.5 277 39.0
Oeu052936.1 Olea europaea HOM05D006340 ORTHO05D007568 8.0e-32 141.7 262 38.9
Rhsim11G0096500 Rhododendron simsii HOM05D006340 ORTHO05D007568 1.0e-31 141.4 218 42.2
ECA246G2180 Erigeron canadensis HOM05D006340 ORTHO05D007568 1.4e-31 141.0 280 38.2
vmacro01568 Vaccinium macrocarpon HOM05D006340 ORTHO05D007568 6.8e-31 138.7 262 37.8
Gohir.A08G205400 Gossypium hirsutum HOM05D006340 ORTHO05D007568 8.8e-31 138.3 239 43.1
AUR62000387 Chenopodium quinoa HOM05D006340 ORTHO05D007568 1.2e-30 137.9 277 38.3
Phvul.001G224800 Phaseolus vulgaris HOM05D006340 ORTHO05D007568 1.7e-29 134.0 272 34.9
PGR031G1700 Punica granatum HOM05D006340 ORTHO05D007568 2.2e-29 133.7 261 38.7
arahy.Tifrunner.gnm1.ann1.Y7QP4L Arachis hypogaea HOM05D006340 ORTHO05D007568 1.1e-28 131.3 253 38.3
CAN.G1076.21 Capsicum annuum HOM05D006340 ORTHO05D007568 1.8e-28 130.6 278 36.0
Glyma.19G228200 Glycine max HOM05D006340 ORTHO05D007568 1.8e-28 130.6 284 36.6
arahy.Tifrunner.gnm1.ann1.9H9EE5 Arachis hypogaea HOM05D006340 ORTHO05D007568 7.0e-28 128.6 257 36.2
Lalb_Chr02g0147781 Lupinus albus HOM05D006340 ORTHO05D007568 7.0e-28 128.6 262 35.1
Eucgr.H03294 Eucalyptus grandis HOM05D006340 ORTHO05D007568 1.2e-27 127.9 261 38.7
VMungo1383G0056 Vigna mungo HOM05D006340 ORTHO05D007568 2.7e-27 126.7 271 35.4
Sopen01g044100 Solanum pennellii HOM05D006340 ORTHO05D007568 3.5e-27 126.3 283 36.7
MBI19_g03242_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 1.0e-26 124.8 268 37.7
Solyc01g100600.4 Solanum lycopersicum HOM05D006340 ORTHO05D007568 1.0e-26 124.8 282 36.5
PGSC0003DMG400002763 Solanum tuberosum HOM05D006340 ORTHO05D007568 1.0e-26 124.8 278 36.0
Glyma.03G231000 Glycine max HOM05D006340 ORTHO05D007568 1.7e-26 124.0 269 36.1
Lj5g0007706 Lotus japonicus HOM05D006340 ORTHO05D007568 2.2e-26 123.6 193 43.0
Oeu053742.1 Olea europaea HOM05D006340 ORTHO05D007568 2.2e-26 123.6 278 37.8
PSO761G0363 Papaver somniferum HOM05D006340 ORTHO05D007568 5.0e-26 122.5 270 34.4
DCAR_029344 Daucus carota HOM05D006340 ORTHO05D007568 1.1e-25 121.3 272 34.2
Nitab4.5_0004525g0020 Nicotiana tabacum HOM05D006340 ORTHO05D007568 1.1e-25 121.3 277 35.4
Migut.N00937 Erythranthe guttata HOM05D006340 ORTHO05D007568 1.5e-25 120.9 267 36.3
Lj5C328T5 Lonicera japonica HOM05D006340 ORTHO05D007568 1.9e-25 120.6 272 38.6
RcHm_v2.0_Chr3g0457201 Rosa chinensis HOM05D006340 ORTHO05D007568 4.2e-25 119.4 295 34.9
Peaxi162Scf01061g00014 Petunia axillaris HOM05D006340 ORTHO05D007568 2.7e-24 116.7 267 35.2
PSO541G0443 Papaver somniferum HOM05D006340 ORTHO05D007568 2.6e-22 110.2 201 38.8
ATR0693G206 Amborella trichopoda HOM05D006340 ORTHO05D007568 6.3e-21 105.5 289 32.2
Nitab4.5_0001338g0100 Nicotiana tabacum HOM05D006340 ORTHO05D007568 8.3e-21 105.1 303 32.7
FvH4_6g07501 Fragaria vesca HOM05D006340 ORTHO05D007568 1.2e-19 101.3 290 33.1
EL10Ac4g09463 Beta vulgaris HOM05D006340 ORTHO05D007568 1.6e-19 100.9 285 30.9
PSO210G6591 Papaver somniferum HOM05D006340 ORTHO05D007568 1.6e-19 100.9 174 37.9
Sc16g0009070 Simmondsia chinensis HOM05D006340 ORTHO05D007568 7.7e-19 98.6 180 40.6
FAN14G3207 Fragaria x ananassa HOM05D006340 ORTHO05D007568 1.0e-18 98.2 290 32.8
Ah.06g195990 Amaranthus hybridus HOM05D006340 ORTHO05D007568 1.3e-18 97.8 148 43.2
Hund07311 Selenicereus undatus HOM05D006340 ORTHO05D007568 3.8e-18 96.3 272 32.0
SGA_v2.0_scaffold5G02892 Striga asiatica HOM05D006340 ORTHO05D007568 1.1e-17 94.7 263 32.3
THA.LOC104816894 Tarenaya hassleriana HOM05D006340 ORTHO05D007568 3.3e-17 93.2 270 30.4
FAN09G1774 Fragaria x ananassa HOM05D006340 ORTHO05D007568 4.2e-17 92.8 289 31.8
FAN02G1774 Fragaria x ananassa HOM05D006340 ORTHO05D007568 1.6e-16 90.9 291 32.0
Zm00001eb130130 Zea mays HOM05D006340 ORTHO05D007568 1.6e-16 90.9 268 34.7
CDE08G0055 Ceratophyllum demersum HOM05D006340 ORTHO05D007568 2.8e-16 90.1 269 29.7
Zm00001eb340330 Zea mays HOM05D006340 ORTHO05D007568 1.4e-15 87.8 251 33.1
Os01g0300900 Oryza sativa ssp. japonica HOM05D006340 ORTHO05D007568 4.4e-14 82.8 281 33.1
Gohir.A11G274100 Gossypium hirsutum HOM05D006340 ORTHO05D007568 4.9e-13 79.3 275 31.6
CDE02G0367 Ceratophyllum demersum HOM05D006340 ORTHO05D007568 2.3e-10 70.5 271 28.0
HPP92_005420 Vanilla planifolia HOM05D006340 ORTHO05D007568 5.0e-10 69.3 141 37.6
FAN05G4753 Fragaria x ananassa HOM05D006340 ORTHO05D007568 6.1e-08 62.4 93 41.9
SMO115G0101 Selaginella moellendorffii HOM05D006340 ORTHO05D007568 8.0e-08 62.0 63 50.8


User provided reference genes

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