Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0000300 Salix brachista HOM05D006309 ORTHO05D007937 7.5e-82 307.0 140 100.0
Sabra05G0014400 Salix brachista HOM05D006309 ORTHO05D007937 7.5e-82 307.0 140 100.0
Potri.005G002900 Populus trichocarpa HOM05D006309 ORTHO05D007937 1.1e-45 186.8 140 68.6
Sabra13G0001700 Salix brachista HOM05D006309 ORTHO05D007937 1.6e-44 183.0 140 65.7
DCAR_007528 Daucus carota HOM05D006309 ORTHO05D007937 2.1e-39 166.0 140 60.0
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea HOM05D006309 ORTHO05D007937 6.0e-39 164.5 144 61.8
Rhsim11G0104500 Rhododendron simsii HOM05D006309 ORTHO05D007937 1.3e-38 163.3 140 62.1
Cpa.g.sc48.50 Carica papaya HOM05D006309 ORTHO05D007937 3.9e-38 161.8 140 61.4
Duzib205G1677 Durio zibethinus HOM05D006309 ORTHO05D007937 8.7e-38 160.6 140 60.7
Oeu061901.1 Olea europaea HOM05D006309 ORTHO05D007937 8.7e-38 160.6 140 60.7
vmacro16416 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 1.1e-37 160.2 140 60.7
Manes.09G181100 Manihot esculenta HOM05D006309 ORTHO05D007937 1.5e-37 159.8 140 60.0
Rhsim11G0105200 Rhododendron simsii HOM05D006309 ORTHO05D007937 1.5e-37 159.8 140 60.7
Cc02_g35850 Coffea canephora HOM05D006309 ORTHO05D007937 3.3e-37 158.7 140 60.0
Dinv24513 Davidia involucrata HOM05D006309 ORTHO05D007937 3.3e-37 158.7 140 60.0
MD12G1199900 Malus domestica HOM05D006309 ORTHO05D007937 4.3e-37 158.3 140 58.6
Nitab4.5_0000936g0050 Nicotiana tabacum HOM05D006309 ORTHO05D007937 4.3e-37 158.3 137 59.9
CAN.G637.25 Capsicum annuum HOM05D006309 ORTHO05D007937 5.6e-37 157.9 137 60.6
vmacro01669 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 5.6e-37 157.9 139 59.0
Prupe.6G304700 Prunus persica HOM05D006309 ORTHO05D007937 7.3e-37 157.5 137 59.9
Ciclev10013195m.g Citrus clementina HOM05D006309 ORTHO05D007937 9.6e-37 157.1 140 58.6
Peaxi162Scf00171g00731 Petunia axillaris HOM05D006309 ORTHO05D007937 9.6e-37 157.1 137 59.1
QL03p010963 Quercus lobata HOM05D006309 ORTHO05D007937 9.6e-37 157.1 137 59.9
Nn7g36656 Nelumbo nucifera HOM05D006309 ORTHO05D007937 1.3e-36 156.8 140 58.6
Nitab4.5_0004454g0020 Nicotiana tabacum HOM05D006309 ORTHO05D007937 1.3e-36 156.8 137 59.1
Solyc03g098120.3 Solanum lycopersicum HOM05D006309 ORTHO05D007937 1.3e-36 156.8 137 59.1
Sopen03g028820 Solanum pennellii HOM05D006309 ORTHO05D007937 1.3e-36 156.8 137 59.1
PGSC0003DMG400031051 Solanum tuberosum HOM05D006309 ORTHO05D007937 2.1e-36 156.0 137 59.1
Ah.06g190700 Amaranthus hybridus HOM05D006309 ORTHO05D007937 2.8e-36 155.6 140 58.6
Phvul.007G205000 Phaseolus vulgaris HOM05D006309 ORTHO05D007937 2.8e-36 155.6 140 57.9
VMungo0720G0633 Vigna mungo HOM05D006309 ORTHO05D007937 2.8e-36 155.6 139 57.6
FvH4_6g08490 Fragaria vesca HOM05D006309 ORTHO05D007937 3.6e-36 155.2 140 57.9
FAN02G0285 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.6e-36 155.2 140 57.9
FAN05G1622 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.6e-36 155.2 140 57.9
FAN09G1610 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.6e-36 155.2 140 57.9
FAN14G3239 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.6e-36 155.2 140 57.9
Hund05518 Selenicereus undatus HOM05D006309 ORTHO05D007937 3.6e-36 155.2 140 58.6
Lalb_Chr02g0147551 Lupinus albus HOM05D006309 ORTHO05D007937 4.8e-36 154.8 140 55.7
Lalb_Chr21g0310061 Lupinus albus HOM05D006309 ORTHO05D007937 6.2e-36 154.5 140 55.7
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea HOM05D006309 ORTHO05D007937 1.1e-35 153.7 140 57.1
Sc16g0009400 Simmondsia chinensis HOM05D006309 ORTHO05D007937 1.1e-35 153.7 140 55.7
GSVIVG01031328001 Vitis vinifera HOM05D006309 ORTHO05D007937 1.1e-35 153.7 140 57.9
CSS0019637 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 1.4e-35 153.3 140 57.9
CSS0033999 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 1.4e-35 153.3 140 57.9
CiPaw.07G036200 Carya illinoinensis HOM05D006309 ORTHO05D007937 1.4e-35 153.3 140 58.6
Haze_03988 Corylus avellana HOM05D006309 ORTHO05D007937 1.4e-35 153.3 140 58.6
Gohir.D08G174300 Gossypium hirsutum HOM05D006309 ORTHO05D007937 1.4e-35 153.3 139 58.3
Gorai.004G182000 Gossypium raimondii HOM05D006309 ORTHO05D007937 1.4e-35 153.3 139 58.3
Thecc.03G310900 Theobroma cacao HOM05D006309 ORTHO05D007937 1.8e-35 152.9 140 57.9
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea HOM05D006309 ORTHO05D007937 2.4e-35 152.5 140 56.4
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea HOM05D006309 ORTHO05D007937 2.4e-35 152.5 140 56.4
Gohir.A08G153400 Gossypium hirsutum HOM05D006309 ORTHO05D007937 3.1e-35 152.1 139 58.3
SalBow4G0401 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.1e-35 152.1 140 57.1
SalBow4G1963 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.1e-35 152.1 140 57.1
SalBow4G2407 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.1e-35 152.1 140 57.1
TAR636G2194 Trochodendron aralioides HOM05D006309 ORTHO05D007937 3.1e-35 152.1 137 58.4
CDE09G0003 Ceratophyllum demersum HOM05D006309 ORTHO05D007937 4.0e-35 151.8 139 54.7
Ca_10200_v3 Cicer arietinum L. HOM05D006309 ORTHO05D007937 5.3e-35 151.4 140 55.7
Medtr1g484930 Medicago truncatula HOM05D006309 ORTHO05D007937 6.9e-35 151.0 140 55.0
Psat6g155680 Pisum sativum HOM05D006309 ORTHO05D007937 6.9e-35 151.0 139 55.4
Atru.chr12.1543 Acer truncatum HOM05D006309 ORTHO05D007937 9.0e-35 150.6 137 56.9
Actinidia22855 Actinidia chinensis HOM05D006309 ORTHO05D007937 9.0e-35 150.6 139 56.8
EL10Ac4g09558 Beta vulgaris HOM05D006309 ORTHO05D007937 9.0e-35 150.6 136 57.4
AUR62000475 Chenopodium quinoa HOM05D006309 ORTHO05D007937 9.0e-35 150.6 140 55.0
Migut.H01672 Erythranthe guttata HOM05D006309 ORTHO05D007937 9.0e-35 150.6 140 55.7
PGR083G2709 Punica granatum HOM05D006309 ORTHO05D007937 9.0e-35 150.6 139 56.1
Sed0021183 Sechium edule HOM05D006309 ORTHO05D007937 9.0e-35 150.6 139 56.8
TPR.G2591 Trifolium pratense HOM05D006309 ORTHO05D007937 9.0e-35 150.6 140 54.3
TWI36G0052 Tripterygium wilfordii HOM05D006309 ORTHO05D007937 9.0e-35 150.6 140 56.4
ClCG02G014650 Citrullus lanatus HOM05D006309 ORTHO05D007937 1.2e-34 150.2 139 56.1
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla HOM05D006309 ORTHO05D007937 1.2e-34 150.2 136 57.4
ATR0796G010 Amborella trichopoda HOM05D006309 ORTHO05D007937 1.5e-34 149.8 137 59.1
Carub.0002s0712 Capsella rubella HOM05D006309 ORTHO05D007937 1.5e-34 149.8 139 54.7
MELO3C004152.2 Cucumis melo HOM05D006309 ORTHO05D007937 1.5e-34 149.8 139 56.1
FvH4_2g19190 Fragaria vesca HOM05D006309 ORTHO05D007937 1.5e-34 149.8 140 56.4
FAN24G3038 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.5e-34 149.8 140 56.4
Glyma.20G090800 Glycine max HOM05D006309 ORTHO05D007937 1.5e-34 149.8 136 55.9
Glyma.20G092200 Glycine max HOM05D006309 ORTHO05D007937 1.5e-34 149.8 136 55.9
CiPaw.04G111200 Carya illinoinensis HOM05D006309 ORTHO05D007937 2.0e-34 149.4 140 56.4
AL1G67090 Arabidopsis lyrata HOM05D006309 ORTHO05D007937 2.6e-34 149.1 139 54.0
RcHm_v2.0_Chr3g0458531 Rosa chinensis HOM05D006309 ORTHO05D007937 2.6e-34 149.1 140 55.7
Os01g0250600 Oryza sativa ssp. japonica HOM05D006309 ORTHO05D007937 4.5e-34 148.3 138 55.8
Sc09g0002420 Simmondsia chinensis HOM05D006309 ORTHO05D007937 4.5e-34 148.3 140 54.3
AT1G57540 Arabidopsis thaliana HOM05D006309 ORTHO05D007937 5.8e-34 147.9 139 53.2
CARHR288700 Cardamine hirsuta HOM05D006309 ORTHO05D007937 1.3e-33 146.7 139 54.0
ECA233G1704 Erigeron canadensis HOM05D006309 ORTHO05D007937 1.3e-33 146.7 140 55.7
SalBow5G3054 Salvia bowleyana HOM05D006309 ORTHO05D007937 1.3e-33 146.7 140 55.0
BcaB07g31141 Brassica carinata HOM05D006309 ORTHO05D007937 1.7e-33 146.4 139 52.5
BcaC04g22081 Brassica carinata HOM05D006309 ORTHO05D007937 1.7e-33 146.4 139 52.5
C09p23680 Brassica napus HOM05D006309 ORTHO05D007937 1.7e-33 146.4 139 52.5
BraA09t37510Z Brassica rapa HOM05D006309 ORTHO05D007937 1.7e-33 146.4 139 52.5
AUR62017099 Chenopodium quinoa HOM05D006309 ORTHO05D007937 1.7e-33 146.4 136 55.1
Sp1g28800 Schrenkiella parvula HOM05D006309 ORTHO05D007937 1.7e-33 146.4 139 52.5
Sp2g05970 Schrenkiella parvula HOM05D006309 ORTHO05D007937 1.7e-33 146.4 139 52.5
CsaV3_2G007320 Cucumis sativus L. HOM05D006309 ORTHO05D007937 2.2e-33 146.0 139 56.1
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 2.2e-33 146.0 139 55.4
unitig_62.g23615 Utricularia gibba HOM05D006309 ORTHO05D007937 2.2e-33 146.0 136 55.1
FAN15G2822 Fragaria x ananassa HOM05D006309 ORTHO05D007937 2.9e-33 145.6 140 55.0
Aa31LG2G11310 Aethionema arabicum HOM05D006309 ORTHO05D007937 3.8e-33 145.2 139 53.2
BolC9t55290H Brassica oleracea HOM05D006309 ORTHO05D007937 3.8e-33 145.2 139 51.8
CANSAT54G2801 Cannabis sativa HOM05D006309 ORTHO05D007937 3.8e-33 145.2 140 56.4
Thhalv10010969m.g Eutrema salsugineum HOM05D006309 ORTHO05D007937 3.8e-33 145.2 139 53.2
A09p18900 Brassica napus HOM05D006309 ORTHO05D007937 4.9e-33 144.8 139 52.5
THA.LOC104820476 Tarenaya hassleriana HOM05D006309 ORTHO05D007937 4.9e-33 144.8 136 52.9
Aqoxy2G02488 Aquilegia oxysepala HOM05D006309 ORTHO05D007937 1.4e-32 143.3 139 52.5
Lj5g0003279 Lotus japonicus HOM05D006309 ORTHO05D007937 1.4e-32 143.3 136 55.1
HanXRQChr08g0212181 Helianthus annuus HOM05D006309 ORTHO05D007937 4.2e-32 141.7 135 55.6
Prupe.8G045300 Prunus persica HOM05D006309 ORTHO05D007937 2.3e-30 136.0 137 53.3
Lj4g0016187 Lotus japonicus HOM05D006309 ORTHO05D007937 7.4e-29 131.0 140 51.4
Cfa012394 Carpinus fangiana HOM05D006309 ORTHO05D007937 1.3e-28 130.2 139 51.1
PSO210G0390 Papaver somniferum HOM05D006309 ORTHO05D007937 2.1e-28 129.4 137 49.6
PSO761G0726 Papaver somniferum HOM05D006309 ORTHO05D007937 2.1e-28 129.4 137 49.6
EL10Ac4g07573 Beta vulgaris HOM05D006309 ORTHO05D007937 5.3e-27 124.8 140 50.0
MBI18_g10373_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 2.6e-26 122.5 140 50.7
Dinv30948 Davidia involucrata HOM05D006309 ORTHO05D007937 2.3e-22 109.4 116 51.7
HanXRQChr06g0180851 Helianthus annuus HOM05D006309 ORTHO05D007937 9.0e-19 97.4 51 84.3
HanXRQChr16g0506271 Helianthus annuus HOM05D006309 ORTHO05D007937 9.0e-19 97.4 51 84.3
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 1.2e-18 97.1 49 85.7
COL.COLO4_16932 Corchorus olitorius HOM05D006309 ORTHO05D007937 5.5e-16 88.2 49 83.7
Mapoly0075s0044 Marchantia polymorpha HOM05D006309 ORTHO05D007937 5.5e-16 88.2 137 35.0
Pp3c8_1240 Physcomitrium patens HOM05D006309 ORTHO05D007937 1.6e-15 86.7 136 35.3
MBI06_g06498_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 3.5e-15 85.5 48 81.2
Zm00001eb239560 Zea mays HOM05D006309 ORTHO05D007937 3.5e-15 85.5 49 75.5
Glyma.09G093300 Glycine max HOM05D006309 ORTHO05D000504 4.6e-15 85.1 51 70.6
Potri.013G002301 Populus trichocarpa HOM05D006309 ORTHO05D007937 1.3e-12 77.0 41 90.2
BNapus_Darmor_BZH_scaffold_223p00020 Brassica napus HOM05D006309 ORTHO05D007937 3.8e-09 65.5 38 76.3
TAR627G1128 Trochodendron aralioides HOM05D006309 ORTHO05D007937 3.9e-06 55.5 37 73.0


User provided reference genes

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