Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0000100 Salix brachista HOM05D005826 ORTHO05D004357 3.8e-107 392.1 302 100.0
Sabra05G0014200 Salix brachista HOM05D005826 ORTHO05D004357 3.8e-107 392.1 302 100.0
Potri.005G002700 Populus trichocarpa HOM05D005826 ORTHO05D004357 2.1e-97 359.8 302 92.1
Manes.08G107500 Manihot esculenta HOM05D005826 ORTHO05D004357 3.4e-79 299.3 302 66.2
GSVIVG01031331001 Vitis vinifera HOM05D005826 ORTHO05D004357 1.7e-75 287.0 317 61.2
Atru.chr12.1539 Acer truncatum HOM05D005826 ORTHO05D004357 4.3e-74 282.3 303 65.3
Manes.09G181300 Manihot esculenta HOM05D005826 ORTHO05D004357 4.3e-74 282.3 302 65.6
CiPaw.07G036400 Carya illinoinensis HOM05D005826 ORTHO05D004357 9.5e-74 281.2 305 64.9
Dinv24515 Davidia involucrata HOM05D005826 ORTHO05D004357 8.0e-73 278.1 304 64.8
Sabra13G0001500 Salix brachista HOM05D005826 ORTHO05D004357 2.3e-72 276.6 343 64.7
CSS0017545 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 6.8e-72 275.0 300 78.3
Cfa006771 Carpinus fangiana HOM05D005826 ORTHO05D004357 8.9e-72 274.6 305 61.6
FAN02G3127 Fragaria x ananassa HOM05D005826 ORTHO05D004357 2.6e-71 273.1 303 75.6
VMungo1383G1915 Vigna mungo HOM05D005826 ORTHO05D004357 2.6e-71 273.1 304 54.6
CSS0045001 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 4.4e-71 272.3 302 77.8
Dinv30950 Davidia involucrata HOM05D005826 ORTHO05D004357 4.9e-70 268.9 303 62.7
Actinidia17738 Actinidia chinensis HOM05D005826 ORTHO05D004357 6.4e-70 268.5 310 64.2
RcHm_v2.0_Chr3g0458551 Rosa chinensis HOM05D005826 ORTHO05D004357 1.4e-69 267.3 307 72.3
Lalb_Chr18g0046231 Lupinus albus HOM05D005826 ORTHO05D004357 1.9e-69 266.9 304 57.6
QL03p011008 Quercus lobata HOM05D005826 ORTHO05D004357 1.9e-69 266.9 299 78.3
FAN09G2233 Fragaria x ananassa HOM05D005826 ORTHO05D004357 2.4e-69 266.5 305 62.6
CANSAT54G1651 Cannabis sativa HOM05D005826 ORTHO05D004357 3.2e-69 266.2 309 60.2
Sopen01g044700 Solanum pennellii HOM05D005826 ORTHO05D004357 3.2e-69 266.2 303 59.4
Cc02_g35870 Coffea canephora HOM05D005826 ORTHO05D004357 4.1e-69 265.8 300 74.3
Ciclev10012662m.g Citrus clementina HOM05D005826 ORTHO05D004357 5.4e-69 265.4 316 59.8
Solyc01g101250.3 Solanum lycopersicum HOM05D005826 ORTHO05D004357 7.0e-69 265.0 303 59.4
Lj1g0011738 Lotus japonicus HOM05D005826 ORTHO05D004357 9.2e-69 264.6 304 61.2
TWI12G0016 Tripterygium wilfordii HOM05D005826 ORTHO05D004357 9.2e-69 264.6 298 62.8
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 1.6e-68 263.8 303 58.4
COL.COLO4_05485 Corchorus olitorius HOM05D005826 ORTHO05D004357 2.0e-68 263.5 303 55.4
Hma1.2p1_0052F.1_g030400 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 2.0e-68 263.5 277 64.6
Thecc.05G329600 Theobroma cacao HOM05D005826 ORTHO05D004357 2.0e-68 263.5 303 60.4
TAR636G1621 Trochodendron aralioides HOM05D005826 ORTHO05D004357 2.0e-68 263.5 303 55.4
PGR083G1613 Punica granatum HOM05D005826 ORTHO05D004357 6.0e-68 261.9 302 52.3
Sed0027683 Sechium edule HOM05D005826 ORTHO05D004357 2.3e-67 260.0 303 59.4
Cpa.g.sc48.51 Carica papaya HOM05D005826 ORTHO05D004357 6.6e-67 258.5 302 62.9
FvH4_6g08510 Fragaria vesca HOM05D005826 ORTHO05D004357 6.6e-67 258.5 305 63.6
CsaV3_1G038040 Cucumis sativus L. HOM05D005826 ORTHO05D004357 1.1e-66 257.7 303 61.7
MD12G1199800 Malus domestica HOM05D005826 ORTHO05D004357 1.1e-66 257.7 300 58.3
TPR.G1630 Trifolium pratense HOM05D005826 ORTHO05D004357 1.1e-66 257.7 308 53.6
FAN14G1262 Fragaria x ananassa HOM05D005826 ORTHO05D004357 1.5e-66 257.3 305 63.3
Phvul.001G222000 Phaseolus vulgaris HOM05D005826 ORTHO05D004357 1.9e-66 256.9 304 53.3
Glyma.19G225400 Glycine max HOM05D005826 ORTHO05D004357 3.3e-66 256.1 304 60.5
Eucgr.B01823 Eucalyptus grandis HOM05D005826 ORTHO05D004357 9.5e-66 254.6 301 57.5
MSTRG.27910 Avicennia marina HOM05D005826 ORTHO05D004357 1.2e-65 254.2 305 64.3
Prupe.6G304400 Prunus persica HOM05D005826 ORTHO05D004357 1.6e-65 253.8 304 73.4
SGA_v2.0_scaffold22G09707 Striga asiatica HOM05D005826 ORTHO05D004357 2.1e-65 253.4 300 50.3
AUR62000478 Chenopodium quinoa HOM05D005826 ORTHO05D004357 2.8e-65 253.1 274 54.0
Migut.N00974 Erythranthe guttata HOM05D005826 ORTHO05D004357 3.6e-65 252.7 306 49.7
Hund07271 Selenicereus undatus HOM05D005826 ORTHO05D004357 4.7e-65 252.3 302 56.6
FAN05G0435 Fragaria x ananassa HOM05D005826 ORTHO05D004357 6.2e-65 251.9 305 72.1
Glyma.03G228100 Glycine max HOM05D005826 ORTHO05D004357 1.1e-64 251.1 304 55.3
arahy.Tifrunner.gnm1.ann1.CWLZ7L Arachis hypogaea HOM05D005826 ORTHO05D004357 1.4e-64 250.8 305 53.8
AUR62006820 Chenopodium quinoa HOM05D005826 ORTHO05D004357 1.4e-64 250.8 301 50.2
Psat3g015120 Pisum sativum HOM05D005826 ORTHO05D004357 1.4e-64 250.8 303 53.8
Nn4g25335 Nelumbo nucifera HOM05D005826 ORTHO05D004357 1.8e-64 250.4 304 61.5
Nn3g21953 Nelumbo nucifera HOM05D005826 ORTHO05D004357 3.1e-64 249.6 303 58.7
Sc09g0002410 Simmondsia chinensis HOM05D005826 ORTHO05D004357 5.2e-64 248.8 305 59.7
arahy.Tifrunner.gnm1.ann1.TKMT5T Arachis hypogaea HOM05D005826 ORTHO05D004357 6.8e-64 248.4 305 55.1
Rhsim11G0105000 Rhododendron simsii HOM05D005826 ORTHO05D004357 6.8e-64 248.4 301 61.5
Peaxi162Scf00194g00018 Petunia axillaris HOM05D005826 ORTHO05D004357 2.0e-63 246.9 305 70.5
Hund21832 Selenicereus undatus HOM05D005826 ORTHO05D004357 2.0e-63 246.9 315 49.8
Nitab4.5_0002516g0020 Nicotiana tabacum HOM05D005826 ORTHO05D004357 2.6e-63 246.5 332 59.6
EL10Ac4g09561 Beta vulgaris HOM05D005826 ORTHO05D004357 7.5e-63 245.0 301 56.1
vmacro01667 Vaccinium macrocarpon HOM05D005826 ORTHO05D004357 9.8e-63 244.6 340 55.6
CAN.G1248.16 Capsicum annuum HOM05D005826 ORTHO05D004357 2.2e-62 243.4 317 56.5
Ca_09273_v3 Cicer arietinum L. HOM05D005826 ORTHO05D004357 4.9e-62 242.3 308 53.2
Gorai.013G210000 Gossypium raimondii HOM05D005826 ORTHO05D004357 1.9e-61 240.4 312 67.3
Gohir.D13G184300 Gossypium hirsutum HOM05D005826 ORTHO05D004357 3.2e-61 239.6 314 66.9
SEGI_10560 Sequoiadendron giganteum HOM05D005826 ORTHO05D004357 9.2e-61 238.0 307 52.1
Aqoxy2G02470 Aquilegia oxysepala HOM05D005826 ORTHO05D004357 2.1e-60 236.9 302 59.9
THA.LOC104821749 Tarenaya hassleriana HOM05D005826 ORTHO05D004357 1.7e-59 233.8 303 58.1
Haze_03986 Corylus avellana HOM05D005826 ORTHO05D004357 2.3e-59 233.4 250 63.6
ATR0796G273 Amborella trichopoda HOM05D005826 ORTHO05D004357 1.5e-58 230.7 306 62.1
Lsat_1_v5_gn_7_64900 Lactuca sativa HOM05D005826 ORTHO05D004357 2.1e-57 226.9 321 56.7
PSO761G0619 Papaver somniferum HOM05D005826 ORTHO05D004357 4.7e-57 225.7 306 70.6
HPP92_027884 Vanilla planifolia HOM05D005826 ORTHO05D004357 6.2e-57 225.3 306 46.7
HanXRQChr09g0247941 Helianthus annuus HOM05D005826 ORTHO05D004357 1.8e-56 223.8 304 67.4
HPP92_006322 Vanilla planifolia HOM05D005826 ORTHO05D004357 1.8e-56 223.8 306 46.1
CDE01G0499 Ceratophyllum demersum HOM05D005826 ORTHO05D004357 8.9e-56 221.5 297 73.4
PSO210G7107 Papaver somniferum HOM05D005826 ORTHO05D004357 1.2e-55 221.1 306 65.7
Nitab4.5_0005662g0030 Nicotiana tabacum HOM05D005826 ORTHO05D004357 1.5e-55 220.7 304 58.2
Gohir.A13G177700 Gossypium hirsutum HOM05D005826 ORTHO05D004357 2.6e-55 219.9 303 65.7
Medtr7g111520 Medicago truncatula HOM05D005826 ORTHO05D004357 1.7e-54 217.2 306 51.6
unitig_26.g9561 Utricularia gibba HOM05D005826 ORTHO05D005018 1.1e-53 214.5 302 44.7
Rhsim11G0104700 Rhododendron simsii HOM05D005826 ORTHO05D004357 1.9e-53 213.8 280 61.1
BcaB04g19716 Brassica carinata HOM05D005826 ORTHO05D004357 7.1e-53 211.8 305 64.6
Ah.06g190730 Amaranthus hybridus HOM05D005826 ORTHO05D004357 9.2e-53 211.5 285 52.3
BcaC04g23633 Brassica carinata HOM05D005826 ORTHO05D004357 9.2e-53 211.5 303 59.4
C09p06300 Brassica napus HOM05D005826 ORTHO05D004357 9.2e-53 211.5 303 59.4
BolC9t53550H Brassica oleracea HOM05D005826 ORTHO05D004357 9.2e-53 211.5 303 59.4
Hma1.2p1_0052F.1_g030390 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 2.7e-52 209.9 175 60.6
A09p05710 Brassica napus HOM05D005826 ORTHO05D004357 3.5e-52 209.5 303 53.8
BraA09t36211Z Brassica rapa HOM05D005826 ORTHO05D004357 3.5e-52 209.5 303 53.8
Sp2g21260 Schrenkiella parvula HOM05D005826 ORTHO05D004357 2.3e-51 206.8 304 64.1
Carub.0006s2438 Capsella rubella HOM05D005826 ORTHO05D004357 3.0e-51 206.5 304 53.3
AT5G26610 Arabidopsis thaliana HOM05D005826 ORTHO05D004357 1.9e-50 203.8 304 51.6
Thhalv10004695m.g Eutrema salsugineum HOM05D005826 ORTHO05D004357 1.9e-50 203.8 305 53.8
ClCG03G017880 Citrullus lanatus HOM05D005826 ORTHO05D004357 2.5e-50 203.4 340 48.2
DCAR_006590 Daucus carota HOM05D005826 ORTHO05D004357 2.1e-49 200.3 194 56.2
Mapoly0026s0010 Marchantia polymorpha HOM05D005826 ORTHO05D004357 2.1e-49 200.3 285 48.4
AL6G38590 Arabidopsis lyrata HOM05D005826 ORTHO05D004357 3.1e-48 196.4 333 49.2
Pp3c20_6860 Physcomitrium patens HOM05D005826 ORTHO05D004357 8.9e-48 194.9 289 50.9
Aa31LG11G9920 Aethionema arabicum HOM05D005826 ORTHO05D004357 6.4e-46 188.7 361 54.0
ECA240G4745 Erigeron canadensis HOM05D005826 ORTHO05D004357 7.1e-45 185.3 311 52.1
Zm00001eb089260 Zea mays HOM05D005826 ORTHO05D004357 7.1e-45 185.3 284 56.3
CARHR186850 Cardamine hirsuta HOM05D005826 ORTHO05D004357 1.3e-43 181.0 273 65.6
MBI12_g27791_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 1.1e-42 177.9 189 51.3
Potri.013G002100 Populus trichocarpa HOM05D005826 ORTHO05D004357 9.3e-37 158.3 152 85.5
MELO3C015241.2 Cucumis melo HOM05D005826 ORTHO05D004357 1.6e-33 147.5 102 72.5
SMO196G0190 Selaginella moellendorffii HOM05D005826 ORTHO05D004357 1.6e-33 147.5 267 39.0
MBI06_g28828_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 8.1e-33 145.2 105 67.6
MBI09_g02136_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 1.6e-28 131.0 189 45.0
MBI12_g47801_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 6.0e-28 129.0 178 42.1
Os04g0115400 Oryza sativa ssp. japonica HOM05D005826 ORTHO05D004357 1.6e-25 120.9 90 64.4
CBR_g48434 Chara braunii HOM05D005826 ORTHO05D004357 1.7e-22 110.9 122 46.7
BcaNung03909 Brassica carinata HOM05D005826 ORTHO05D004357 1.9e-21 107.5 233 36.5
PGSC0003DMG400018243 Solanum tuberosum HOM05D005826 ORTHO05D004357 2.1e-20 104.0 130 59.2
AagrBONN_evm.TU.Sc2ySwM_362.2503 Anthoceros agrestis HOM05D005826 ORTHO05D004357 5.1e-19 99.4 137 42.3
PGR083G0870 Punica granatum HOM05D005826 ORTHO05D004357 1.2e-15 88.2 116 50.9
Cre03.g201250 Chlamydomonas reinhardtii HOM05D005826 ORTHO05D004357 7.6e-15 85.5 136 47.1
Os05g0229475 Oryza sativa ssp. japonica HOM05D005826 ORTHO05D004357 1.3e-14 84.7 47 80.9
BcaNung03680 Brassica carinata HOM05D005826 ORTHO05D004357 2.3e-11 73.9 46 71.7
BraA06t26622Z Brassica rapa HOM05D005826 ORTHO05D004357 1.1e-10 71.6 44 70.5
C07p41530 Brassica napus HOM05D005826 ORTHO05D004357 4.3e-10 69.7 43 72.1
BolC7t44686H Brassica oleracea HOM05D005826 ORTHO05D004357 4.3e-10 69.7 43 72.1
A06p36960 Brassica napus HOM05D005826 ORTHO05D004357 5.7e-10 69.3 44 68.2
Oeu023421.1 Olea europaea HOM05D005826 ORTHO05D004357 8.2e-09 65.5 55 65.5
MELO3C021663.2 Cucumis melo HOM05D005826 ORTHO05D004357 2.4e-08 63.9 29 96.6
CDE12G0861 Ceratophyllum demersum HOM05D005826 ORTHO05D004357 1.5e-07 61.2 29 93.1
Migut.O00760 Erythranthe guttata HOM05D005826 ORTHO05D004357 1.5e-07 61.2 54 61.1
Os04g0114801 Oryza sativa ssp. japonica HOM05D005826 ORTHO05D004357 5.9e-07 59.3 59 50.8
SEGI_21811 Sequoiadendron giganteum HOM05D008111 ORTHO05D002142 5.0e-06 56.2 53 49.1


User provided reference genes

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