Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0014100 Salix brachista HOM05D002165 ORTHO05D001531 2.7e-46 188.3 96 100.0
Potri.005G002500 Populus trichocarpa HOM05D002165 ORTHO05D001531 1.8e-39 165.6 97 91.8
Potri.005G002600 Populus trichocarpa HOM05D002165 ORTHO05D001531 1.8e-39 165.6 97 91.8
Potri.013G002000 Populus trichocarpa HOM05D002165 ORTHO05D001531 2.6e-33 145.2 96 80.2
Potri.013G001800 Populus trichocarpa HOM05D002165 ORTHO05D001531 4.4e-33 144.4 96 80.2
Potri.013G001900 Populus trichocarpa HOM05D002165 ORTHO05D001531 4.4e-33 144.4 96 80.2
Sabra13G0001400 Salix brachista HOM05D002165 ORTHO05D001531 3.2e-31 138.3 96 76.0
Sabra13G0001300 Salix brachista HOM05D002165 ORTHO05D001531 2.3e-29 132.1 96 76.0
Sabra13G0005300 Salix brachista HOM05D002165 ORTHO05D001531 1.2e-22 109.8 95 64.2
Duzib128G1662 Durio zibethinus HOM05D002165 ORTHO05D001531 7.3e-12 73.9 97 46.4
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 1.6e-11 72.8 92 47.8
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 1.6e-11 72.8 92 47.8
Thecc.09G084900 Theobroma cacao HOM05D002165 ORTHO05D001531 4.7e-11 71.2 92 50.0
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.1e-11 70.5 82 54.9
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 1.1e-10 70.1 92 52.2
Manes.15G075800 Manihot esculenta HOM05D002165 ORTHO05D001531 2.4e-10 68.9 92 47.8
COL.COLO4_05484 Corchorus olitorius HOM05D002165 ORTHO05D001531 4.0e-10 68.2 85 49.4
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 6.8e-10 67.4 85 49.4
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.0e-09 65.9 91 50.5
Gohir.D13G184400 Gossypium hirsutum HOM05D002165 ORTHO05D001531 4.4e-09 64.7 92 48.9
Gorai.013G210100 Gossypium raimondii HOM05D002165 ORTHO05D001531 4.4e-09 64.7 92 48.9
Carub.0003s0521 Capsella rubella HOM05D002165 ORTHO05D001531 7.6e-09 63.9 85 47.1
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.6e-09 63.9 88 45.5
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.6e-09 63.9 88 45.5
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 9.9e-09 63.5 83 48.2
Gohir.A13G177800 Gossypium hirsutum HOM05D002165 ORTHO05D001531 9.9e-09 63.5 92 48.9
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.2e-08 62.4 91 48.4
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.2e-08 62.4 87 48.3
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 2.9e-08 62.0 84 45.2
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 2.9e-08 62.0 84 45.2
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 2.9e-08 62.0 84 45.2
Thecc.05G329700 Theobroma cacao HOM05D002165 ORTHO05D001531 2.9e-08 62.0 85 49.4
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 3.8e-08 61.6 85 43.5
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.8e-08 61.6 91 48.4
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.8e-08 61.6 83 48.2
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 8.4e-08 60.5 84 45.2
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 8.4e-08 60.5 84 45.2
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 8.4e-08 60.5 84 45.2
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.4e-07 59.7 85 45.9
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 1.4e-07 59.7 85 44.7
Eucgr.H01332 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.9e-07 59.3 83 44.6
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 1.9e-07 59.3 85 42.4
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.4e-07 58.9 96 42.7
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.4e-07 58.9 96 42.7
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 2.4e-07 58.9 79 46.8
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.2e-07 58.5 83 45.8
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.4e-07 57.8 82 46.3
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.4e-07 57.8 83 43.4
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 5.4e-07 57.8 96 41.7
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 5.4e-07 57.8 92 43.5
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 5.4e-07 57.8 87 44.8
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.1e-07 57.4 89 43.8
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.2e-06 56.6 82 45.1
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 1.6e-06 56.2 83 39.8
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 1.6e-06 56.2 84 39.3
Sp3g04720 Schrenkiella parvula HOM05D002165 ORTHO05D001531 2.1e-06 55.8 95 41.1
BcaC05g29776 Brassica carinata HOM05D002165 ORTHO05D001531 2.7e-06 55.5 74 45.9
A05p42200 Brassica napus HOM05D002165 ORTHO05D001531 2.7e-06 55.5 76 46.1
BraA05t22939Z Brassica rapa HOM05D002165 ORTHO05D001531 2.7e-06 55.5 76 46.1
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 3.5e-06 55.1 85 43.5
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 3.5e-06 55.1 96 40.6
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.5e-06 55.1 96 40.6
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 3.5e-06 55.1 97 42.3
BcaC05g30083 Brassica carinata HOM05D002165 ORTHO05D001531 4.6e-06 54.7 74 45.9
Ciclev10010714m.g Citrus clementina HOM05D002165 ORTHO05D001531 4.6e-06 54.7 84 47.6
BcaC09g47857 Brassica carinata HOM05D002165 ORTHO05D001531 6.0e-06 54.3 84 42.9
A01p30200 Brassica napus HOM05D002165 ORTHO05D001531 6.0e-06 54.3 84 41.7
C05p61420 Brassica napus HOM05D002165 ORTHO05D001531 6.0e-06 54.3 74 45.9
BolC1t05659H Brassica oleracea HOM05D002165 ORTHO05D001531 6.0e-06 54.3 84 42.9
BolC5t34800H Brassica oleracea HOM05D002165 ORTHO05D001531 6.0e-06 54.3 74 45.9
BraA01t04469Z Brassica rapa HOM05D002165 ORTHO05D001531 6.0e-06 54.3 84 42.9
DCAR_002558 Daucus carota HOM05D002165 ORTHO05D001531 6.0e-06 54.3 82 41.5
Sed0005500 Sechium edule HOM05D002165 ORTHO05D001531 6.0e-06 54.3 92 38.0
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 7.8e-06 53.9 85 42.4
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 7.8e-06 53.9 92 42.4


User provided reference genes

Program Settings