Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 9.0e-75 283.5 142 100.0
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 7.6e-74 280.4 142 98.6
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 1.9e-64 249.2 140 87.1
Sabra11G0113000 Salix brachista HOM05D008339 ORTHO05D009712 7.7e-50 200.7 106 95.3
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 8.2e-36 154.1 138 54.3
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.6e-34 149.1 139 51.8
MELO3C004168.2 Cucumis melo HOM05D008339 ORTHO05D009712 4.5e-34 148.3 139 51.1
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 5.9e-34 147.9 138 50.0
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 5.9e-34 147.9 139 50.4
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 5.9e-34 147.9 139 50.4
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 7.7e-34 147.5 138 50.7
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 8.5e-33 144.1 140 50.7
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 2.5e-32 142.5 139 47.5
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 9.4e-32 140.6 138 50.0
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 5.7e-29 131.3 139 46.0
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 9.7e-29 130.6 142 47.2
MELO3C031306.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.2e-28 129.4 139 47.5
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 2.8e-28 129.0 140 41.4
MELO3C031307.2 Cucumis melo HOM05D008339 ORTHO05D009712 6.3e-28 127.9 139 46.8
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.1e-27 127.1 135 48.1
MELO3C004157.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.4e-27 126.7 136 45.6
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 1.8e-27 126.3 141 47.5
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 2.4e-27 125.9 133 48.9
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 3.1e-27 125.6 139 45.3
Gorai.007G298200 Gossypium raimondii HOM05D008339 ORTHO05D009712 3.1e-27 125.6 128 46.1
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 1.6e-26 123.2 140 43.6
Gohir.D11G276100 Gossypium hirsutum HOM05D008339 ORTHO05D009712 2.7e-26 122.5 124 46.0
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 5.9e-26 121.3 138 42.0
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 2.9e-25 119.0 134 43.3
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 8.5e-25 117.5 134 44.0
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 1.1e-24 117.1 139 41.0
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 3.2e-24 115.5 131 42.0
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 4.2e-24 115.2 138 42.8
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.2e-23 113.6 141 39.7
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.6e-23 113.2 141 39.7
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 2.1e-23 112.8 141 39.7
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.1e-23 112.8 141 39.7
PGR031G2810 Punica granatum HOM05D008339 ORTHO05D009712 2.1e-23 112.8 134 43.3
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 8.0e-23 110.9 138 42.0
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 2.3e-22 109.4 139 38.8
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 5.2e-22 108.2 134 42.5
MELO3C031523.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.5e-21 106.7 100 53.0
MELO3C031309.2 Cucumis melo HOM05D008339 ORTHO05D009712 4.4e-21 105.1 97 54.6
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 5.7e-21 104.8 134 41.8
Ah.06g196240 Amaranthus hybridus HOM05D008339 ORTHO05D009712 2.2e-20 102.8 142 39.4
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 8.3e-20 100.9 140 34.3
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 8.3e-20 100.9 140 34.3
Sed0011112 Sechium edule HOM05D008339 ORTHO05D009712 8.3e-20 100.9 138 39.9
MELO3C031308.2 Cucumis melo HOM05D008339 ORTHO05D009712 9.1e-19 97.4 113 38.9
Prupe.1G205300 Prunus persica HOM05D008339 ORTHO05D009712 1.0e-17 94.0 98 50.0
PGR031G3403 Punica granatum HOM05D008339 ORTHO05D009712 1.9e-16 89.7 140 32.9
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 1.8e-14 83.2 137 32.1
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 4.0e-14 82.0 139 32.4
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 1.2e-13 80.5 134 30.6
MELO3C004164.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.5e-13 80.1 134 35.8
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 3.4e-13 79.0 138 31.9
AT1G09360 Arabidopsis thaliana HOM05D013394 ORTHO05D009712 1.3e-12 77.0 134 33.6
Eucgr.E00366 Eucalyptus grandis HOM05D008339 ORTHO05D009712 1.3e-12 77.0 140 33.6
Sed0015156 Sechium edule HOM05D011459 ORTHO05D013640 1.7e-12 76.6 132 34.8
Carub.0001s0870 Capsella rubella HOM05D013394 ORTHO05D009712 2.8e-12 75.9 134 33.6
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 2.4e-11 72.8 135 32.6
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 3.1e-11 72.4 128 32.8
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 5.4e-11 71.6 139 30.9
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 5.4e-11 71.6 137 31.4
Sabra11G0112900 Salix brachista HOM05D000311 ORTHO05D000183 5.4e-11 71.6 32 100.0
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 7.0e-11 71.2 128 32.0
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 1.6e-10 70.1 133 29.3
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 1.6e-10 70.1 133 29.3
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 2.7e-10 69.3 134 29.9
C05p07380 Brassica napus HOM05D009911 ORTHO05D009712 4.5e-10 68.6 133 30.1
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 4.5e-10 68.6 138 31.2
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 7.8e-10 67.8 135 29.6
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 1.0e-09 67.4 129 29.5
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 1.7e-09 66.6 137 32.1
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 2.3e-09 66.2 136 30.9
CARHR009330 Cardamine hirsuta HOM05D009911 ORTHO05D009712 2.9e-09 65.9 129 31.0
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 2.9e-09 65.9 133 30.8
C05p07340 Brassica napus HOM05D013394 ORTHO05D009712 3.8e-09 65.5 137 28.5
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 5.0e-09 65.1 136 30.1
AT1G09370 Arabidopsis thaliana HOM05D009911 ORTHO05D009712 1.1e-08 63.9 128 29.7
Sp1g07980 Schrenkiella parvula HOM05D009911 ORTHO05D009712 1.1e-08 63.9 128 29.7
BcaC05g24789 Brassica carinata HOM05D013394 ORTHO05D009712 1.5e-08 63.5 137 27.7
BolC5t29492H Brassica oleracea HOM05D013394 ORTHO05D009712 1.5e-08 63.5 137 27.7
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 4.3e-08 62.0 134 26.9
A06p06100 Brassica napus HOM05D013394 ORTHO05D009712 7.3e-08 61.2 137 27.0
BraA06t23823Z Brassica rapa HOM05D013394 ORTHO05D009712 9.5e-08 60.8 137 27.0
FAN05G4801 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.1e-07 59.7 75 34.7
Sabra08G0008100 Salix brachista HOM05D008403 ORTHO05D010317 2.8e-07 59.3 134 27.6
SGA_v2.0_scaffold74G24609 Striga asiatica HOM05D009933 ORTHO05D009712 2.8e-07 59.3 136 29.4
BcaC05g24790 Brassica carinata HOM05D009911 ORTHO05D009712 3.6e-07 58.9 133 27.8
BolC5t29493H Brassica oleracea HOM05D009911 ORTHO05D009712 3.6e-07 58.9 133 27.8
C05p07360 Brassica napus HOM05D009911 ORTHO05D009712 4.7e-07 58.5 133 27.8
Lalb_Chr12g0200791 Lupinus albus HOM05D001578 ORTHO05D001207 1.0e-06 57.4 129 27.9
MBI07_g43317_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D001261 1.0e-06 57.4 104 31.7
MBI07_g46097_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D013640 1.0e-06 57.4 104 31.7
Sed0004364 Sechium edule HOM05D011459 ORTHO05D013640 1.4e-06 57.0 135 31.1
arahy.Tifrunner.gnm1.ann1.2R90TF Arachis hypogaea HOM05D000961 ORTHO05D001207 1.8e-06 56.6 130 28.5
Glyma.17G036100 Glycine max HOM05D001578 ORTHO05D001207 2.3e-06 56.2 137 27.0
Lalb_Chr07g0181951 Lupinus albus HOM05D001578 ORTHO05D001207 2.3e-06 56.2 137 27.7
SGA_v2.0_scaffold74G24619 Striga asiatica HOM05D009933 ORTHO05D012084 3.0e-06 55.8 127 28.3
A06p06070 Brassica napus HOM05D009911 ORTHO05D009712 4.0e-06 55.5 140 27.1
Phvul.003G116900 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 4.0e-06 55.5 137 27.0
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 4.0e-06 55.5 134 25.4
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 5.2e-06 55.1 138 24.6
CAN.G676.49 Capsicum annuum HOM05D009933 ORTHO05D012084 6.8e-06 54.7 110 26.4
Glyma.07G237500 Glycine max HOM05D001578 ORTHO05D001207 6.8e-06 54.7 137 25.5
Glyma.15G138400 Glycine max HOM05D001578 ORTHO05D001207 8.9e-06 54.3 138 26.1


User provided reference genes

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