Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 1.0e-170 604.0 495 100.0
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 3.8e-104 382.9 464 77.6
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.3e-72 278.1 465 67.5
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 8.3e-59 232.3 241 61.4
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 1.7e-43 181.4 236 50.4
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 5.4e-42 176.4 221 51.1
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 2.7e-41 174.1 255 42.4
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 3.0e-40 170.6 221 48.9
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 6.6e-40 169.5 283 42.0
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 7.3e-39 166.0 254 44.9
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.8e-38 164.1 267 43.4
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 2.3e-37 161.0 247 44.1
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 1.5e-36 158.3 212 50.5
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 2.6e-36 157.5 228 46.5
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 4.4e-36 156.8 223 49.8
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 7.5e-36 156.0 223 47.5
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 2.2e-35 154.5 234 46.6
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.2e-35 154.5 234 46.6
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.7e-35 153.7 234 47.4
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 6.4e-35 152.9 241 41.9
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 8.3e-35 152.5 208 47.6
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 1.4e-34 151.8 222 44.6
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 2.4e-34 151.0 241 41.9
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 2.4e-34 151.0 225 43.6
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 4.1e-34 150.2 263 42.6
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 5.4e-34 149.8 207 47.8
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 9.2e-34 149.1 222 45.9
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.5e-33 147.1 233 45.9
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 3.0e-32 144.1 212 48.6
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 3.9e-32 143.7 245 41.2
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 2.5e-31 141.0 226 46.0
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 3.3e-31 140.6 233 42.9
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 3.3e-31 140.6 248 43.1
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 5.6e-31 139.8 261 40.2
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 1.2e-30 138.7 263 40.7
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 1.6e-30 138.3 245 41.2
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 2.1e-30 137.9 269 35.3
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 2.8e-30 137.5 240 44.2
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 1.8e-29 134.8 232 44.0
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 3.1e-29 134.0 276 38.4
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 3.1e-29 134.0 272 36.8
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 4.0e-29 133.7 176 50.0
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 4.0e-29 133.7 243 43.6
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 5.2e-29 133.3 188 47.3
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 8.9e-29 132.5 166 54.2
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 1.5e-28 131.7 190 45.8
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 2.6e-28 131.0 228 43.4
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 2.6e-28 131.0 203 44.3
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 4.4e-28 130.2 251 41.8
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 7.6e-28 129.4 263 37.6
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.3e-27 128.6 252 38.1
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 7.1e-26 122.9 248 37.1
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 9.2e-26 122.5 250 36.8
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 1.2e-25 122.1 229 39.7
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 1.6e-25 121.7 245 38.8
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 2.1e-25 121.3 245 38.0
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 6.0e-25 119.8 205 41.5
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 6.0e-25 119.8 249 37.8
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 6.0e-25 119.8 194 43.3
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 1.0e-24 119.0 249 37.8
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 1.0e-24 119.0 249 37.8
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 1.0e-24 119.0 249 37.8
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 1.7e-24 118.2 200 42.0
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 3.9e-24 117.1 250 35.6
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 5.1e-24 116.7 160 49.4
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 8.7e-24 115.9 234 38.0
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 1.9e-23 114.8 160 48.8
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 1.9e-23 114.8 268 35.4
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 3.3e-23 114.0 199 41.7
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 3.3e-23 114.0 215 37.7
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 4.3e-23 113.6 258 36.4
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 2.1e-22 111.3 297 32.0
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 2.8e-22 110.9 227 38.3
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 4.7e-22 110.2 251 41.0
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 8.1e-22 109.4 258 36.4
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 1.4e-21 108.6 237 40.5
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 1.8e-21 108.2 251 37.5
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 6.9e-21 106.3 161 45.3
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 9.0e-21 105.9 250 35.2
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 1.2e-20 105.5 236 36.9
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 2.0e-20 104.8 237 37.1
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 2.0e-20 104.8 212 36.8
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 4.4e-20 103.6 250 31.6
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 2.9e-19 100.9 250 35.6
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 1.4e-18 98.6 214 36.0
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 3.2e-18 97.4 282 33.3
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 3.2e-18 97.4 154 42.2
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 6.6e-16 89.7 200 36.5
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 4.3e-15 87.0 178 35.4
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.3e-14 85.5 209 38.8
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 2.8e-14 84.3 300 32.3
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 2.8e-14 84.3 190 38.9
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 3.6e-14 84.0 259 31.3
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 1.1e-13 82.4 260 27.3
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 5.8e-12 76.6 60 70.0
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 5.8e-12 76.6 60 70.0
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 9.9e-12 75.9 227 33.5
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 9.3e-10 69.3 60 60.0
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 1.2e-09 68.9 202 32.2
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 3.5e-09 67.4 110 42.7
Actinidia11494 Actinidia chinensis HOM05D040087 ORTHO05D008119 7.9e-09 66.2 93 49.5
CSS0037917 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 3.0e-08 64.3 79 53.2
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 6.7e-08 63.2 61 54.1
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 7.4e-07 59.7 216 30.6
Aa31LG5G23390 Aethionema arabicum HOM05D006830 ORTHO05D008119 6.2e-06 56.6 69 52.2
BolC3t14925H Brassica oleracea HOM05D006830 ORTHO05D008119 8.1e-06 56.2 34 82.4


User provided reference genes

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