Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 5.2e-184 648.3 535 100.0
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 3.1e-136 489.6 536 85.3
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.2e-39 168.7 539 51.8
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 2.1e-39 167.9 435 57.5
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 6.2e-36 156.4 535 54.4
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.1e-32 145.6 539 50.3
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 2.5e-32 144.4 447 58.8
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 2.3e-30 137.9 158 46.8
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 3.9e-30 137.1 440 57.0
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 5.1e-30 136.7 471 56.7
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 2.8e-28 131.0 529 52.0
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 1.2e-26 125.6 438 58.4
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 1.5e-26 125.2 157 54.8
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 4.5e-26 123.6 442 62.2
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 2.2e-25 121.3 423 58.2
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 4.2e-24 117.1 201 37.8
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 5.5e-24 116.7 155 38.7
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 5.5e-24 116.7 156 38.5
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 1.2e-23 115.5 435 62.1
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 1.2e-23 115.5 440 55.0
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 3.9e-22 110.5 536 54.5
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 5.1e-22 110.2 157 56.7
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 1.1e-21 109.0 537 55.5
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 1.1e-21 109.0 141 41.1
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 2.0e-21 108.2 373 63.3
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 2.5e-21 107.8 121 46.3
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 5.7e-21 106.7 155 36.1
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 7.4e-21 106.3 373 63.3
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 2.8e-20 104.4 138 39.9
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 8.2e-20 102.8 412 44.2
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 1.4e-19 102.1 155 35.5
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 1.4e-19 102.1 372 63.7
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 1.4e-19 102.1 156 36.5
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 9.1e-19 99.4 458 57.2
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 1.2e-18 99.0 164 36.6
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 2.0e-18 98.2 153 31.4
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 4.5e-18 97.1 157 47.1
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 2.9e-17 94.4 373 62.7
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 2.9e-17 94.4 443 60.5
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 8.5e-17 92.8 448 50.7
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 2.5e-16 91.3 133 36.8
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 3.2e-16 90.9 402 51.5
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 7.2e-16 89.7 435 55.2
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 9.4e-16 89.4 140 50.7
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 1.2e-15 89.0 438 55.0
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 1.2e-15 89.0 447 57.0
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 1.2e-15 89.0 446 54.7
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 1.6e-15 88.6 131 41.2
Manes.08G171200 Manihot esculenta HOM05D007752 ORTHO05D009994 2.7e-15 87.8 141 56.7
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.6e-15 87.4 115 40.0
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 3.6e-15 87.4 158 33.5
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 4.7e-15 87.0 370 50.3
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 6.7e-14 83.2 119 33.6
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 3.3e-13 80.9 156 46.8
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 4.4e-13 80.5 137 47.4
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 5.7e-13 80.1 174 29.9
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 7.4e-13 79.7 99 45.5
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 2.2e-12 78.2 111 38.7
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 3.7e-12 77.4 118 33.9
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 6.3e-12 76.6 116 40.5
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 4.1e-11 73.9 68 51.5
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 4.1e-11 73.9 143 32.9
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 4.5e-10 70.5 152 32.9
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.3e-09 68.9 140 31.4
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.3e-09 68.9 140 31.4
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 1.7e-09 68.6 205 29.8
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 1.7e-09 68.6 132 36.4
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 6.5e-09 66.6 137 44.5
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 8.5e-09 66.2 139 30.2
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 1.1e-08 65.9 80 40.0
CDE04G1037 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 7.2e-08 63.2 73 41.1
HPP92_024978 Vanilla planifolia HOM05D007752 ORTHO05D009994 7.2e-08 63.2 96 34.4
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 8.0e-07 59.7 123 31.7
VMungo0720G0765 Vigna mungo HOM05D007752 ORTHO05D009994 1.0e-06 59.3 68 44.1
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 1.4e-06 58.9 181 28.2
PGSC0003DMG400038126 Solanum tuberosum HOM05D007752 ORTHO05D009994 1.4e-06 58.9 71 39.4


User provided reference genes

Program Settings